Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-1778

Gene Name Gene ID Reads Annotation
gga-mir-1778 ENSGALG00000025181 8765 gga-mir-1778 [Source:miRBase;Acc:MI0007521]











Genes with expression patterns similar to gga-mir-1778

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-1778 ENSGALG00000025181 8765 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-1778 [Source:miRBase;Acc:MI0007521]
2. COPB2 ENSGALG00000005357 15208 1.872 - - - - 0.946 - - 0.926 - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
3. DARS ENSGALG00000012355 2887 1.818 - - - - 0.983 - - 0.835 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
4. FAM18B1 ENSGALG00000001335 5177 1.804 - - - - 0.979 - 0.825 - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
5. TMEM167A ENSGALG00000027332 13862 1.803 - - - - 0.968 - 0.835 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
6. COPG2 ENSGALG00000008144 4542 1.783 - - - - 0.980 - 0.803 - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
7. SRP68 ENSGALG00000002062 7370 1.77 - - - - 0.975 - 0.795 - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
8. OCIAD1 ENSGALG00000014081 12065 1.752 - - - - 0.975 - 0.777 - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
9. GPALPP1 ENSGALG00000031567 4221 1.733 - - - - 0.978 - 0.755 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
10. PAXIP1 ENSGALG00000036064 3120 1.715 - - - - 0.978 - 0.737 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
11. RANBP1 ENSGALG00000002107 17715 1.714 - - - - 0.890 - 0.824 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
12. WSB2 ENSGALG00000008151 13246 1.713 - - - - 0.968 - 0.745 - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
13. ADSL ENSGALG00000012034 10280 1.71 - - - - 0.974 - 0.736 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
14. KAT6A ENSGALG00000003641 2631 1.706 - - - - 0.979 - 0.727 - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
15. KDM1A ENSGALG00000033469 20632 1.698 - - - - 0.985 - 0.713 - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
16. ZNF593 ENSGALG00000000542 79105 1.682 - - - - 0.882 - 0.800 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
17. MPPED1 ENSGALG00000014186 5726 1.682 - - - - 0.971 - 0.711 - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
18. PSMD12 ENSGALG00000026225 17473 1.677 - - - - 0.907 - 0.770 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
19. MRPL20 ENSGALG00000001542 28764 1.656 - - - - 0.911 - 0.745 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
20. BRP44 BRP44 17093 1.647 - - - - 0.904 - 0.743 - - -
21. DCAF7 ENSGALG00000000510 8681 1.646 - - - - - - 0.824 0.822 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
22. GOLGA7 ENSGALG00000003483 26525 1.643 - - - - 0.894 - 0.749 - - - golgin A7 [Source:NCBI gene;Acc:426787]
23. LEPREL4 LEPREL4 5609 1.63 - - - - 0.922 - 0.708 - - -
24. COMMD7 ENSGALG00000006630 11491 1.596 - - - - - - 0.778 0.818 - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
25. RPS8 ENSGALG00000010124 363516 1.596 - - - - 0.894 - - 0.702 - - ribosomal protein S8 [Source:NCBI gene;Acc:424584]
26. SDHD ENSGALG00000007878 25129 1.595 - - - - - - 0.710 0.885 - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
27. SDAD1 ENSGALG00000011543 5191 1.582 - - - - - - 0.751 0.831 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
28. MMP2 ENSGALG00000003580 13120 1.569 - - - - - 0.768 - - 0.801 - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
29. PI4KA ENSGALG00000040756 3973 1.568 - - - - - - 0.734 0.834 - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
30. DYRK2 ENSGALG00000009901 3141 1.567 - - - - - - 0.744 0.823 - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
31. RP2 ENSGALG00000016728 3291 1.552 - - - - - - 0.716 0.836 - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]
32. ST5 6869 1.533 - - - - - - 0.716 0.817 - - suppression of tumorigenicity 5, transcript variant X1
33. PSMB7 ENSGALG00000001103 42683 1.516 - - - - 0.751 - 0.765 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
34. MRPL30 ENSGALG00000016760 16965 1.513 - - - - - - 0.753 0.760 - - mitochondrial ribosomal protein L30
35. CLN8 ENSGALG00000039606 4209 1.505 - - - - - - 0.723 - 0.782 - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
36. MED9 ENSGALG00000031214 10779 1.489 - - - - - - 0.754 0.735 - - mediator complex subunit 9 [Source:NCBI gene;Acc:416506]
37. NUPL1 NUPL1 8197 1.479 - - - - - - 0.763 0.716 - -
38. CLSPN ENSGALG00000002346 2590 0.984 - - - - 0.984 - - - - - claspin [Source:NCBI gene;Acc:428223]
39. MTG1 ENSGALG00000003549 5032 0.982 - - - - 0.982 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
40. RBM15B 5416 0.982 - - - - 0.982 - - - - - RNA binding motif protein 15B
41. CRIPT ENSGALG00000010014 4311 0.982 - - - - 0.982 - - - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
42. CSNK1E ENSGALG00000032257 2165 0.981 - - - - 0.981 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
43. CDR2L ENSGALG00000026295 4142 0.981 - - - - 0.981 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
44. PDXP ENSGALG00000023131 2663 0.981 - - - - 0.981 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
45. MXD4 ENSGALG00000015688 1472 0.981 - - - - 0.981 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
46. FOCAD ENSGALG00000015071 3677 0.981 - - - - 0.981 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
47. SOD2 ENSGALG00000011661 13178 0.981 - - - - 0.981 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
48. TDRD3 ENSGALG00000016936 3412 0.98 - - - - 0.980 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
49. NOL12 ENSGALG00000012410 5658 0.98 - - - - 0.980 - - - - - nucleolar protein 12
50. MAP3K13 ENSGALG00000006655 632 0.98 - - - - 0.980 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
51. TMEM65 ENSGALG00000037371 776 0.979 - - - - 0.979 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
52. PCIF1 ENSGALG00000023547 867 0.979 - - - - 0.979 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
53. ENSGALG00000005720 ENSGALG00000005720 1666 0.979 - - - - 0.979 - - - - -
54. TIMM21 ENSGALG00000013709 3215 0.979 - - - - 0.979 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
55. C9orf89 C9orf89 3056 0.978 - - - - 0.978 - - - - -
56. PIK3CD ENSGALG00000002583 1036 0.978 - - - - 0.978 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
57. AEN ENSGALG00000044204 2633 0.978 - - - - 0.978 - - - - - apoptosis enhancing nuclease, transcript variant X1
58. FBXW7 ENSGALG00000010103 5982 0.978 - - - - 0.978 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
59. ITPK1 ENSGALG00000034898 4212 0.978 - - - - 0.978 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
60. RHBDF1 ENSGALG00000007434 2359 0.977 - - - - 0.977 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
61. ZNF326 ENSGALG00000006113 15141 0.977 - - - - 0.977 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
62. GLB1L2 ENSGALG00000001604 4057 0.977 - - - - 0.977 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
63. CNOT2 ENSGALG00000010042 7612 0.976 - - - - 0.976 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
64. MAP1LC3A ENSGALG00000038721 2230 0.976 - - - - 0.976 - - - - - microtubule associated protein 1 light chain 3 alpha
65. NMT1 ENSGALG00000000857 5770 0.976 - - - - 0.976 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
66. HABP4 ENSGALG00000012628 2894 0.976 - - - - 0.976 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
67. TIA1 ENSGALG00000013879 16330 0.975 - - - - 0.975 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
68. MAP2K4 ENSGALG00000032178 5982 0.975 - - - - 0.975 - - - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
69. LSMD1 LSMD1 2562 0.975 - - - - 0.975 - - - - -
70. B4GAL-T7 B4GAL-T7 12356 0.974 - - - - 0.974 - - - - -
71. AIP ENSGALG00000040247 4166 0.974 - - - - 0.974 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
72. TXNDC9 ENSGALG00000032090 6804 0.974 - - - - 0.974 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
73. BTBD7 4136 0.973 - - - - 0.973 - - - - - BTB domain containing 7, transcript variant X2
74. LFNG ENSGALG00000038515 5178 0.969 - - - - 0.969 - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
75. ASPM ENSGALG00000032398 12784 0.969 - - - - 0.969 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
76. TLK1 ENSGALG00000009569 5446 0.969 - - - - 0.969 - - - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
77. DRG1 ENSGALG00000006921 10791 0.968 - - - - 0.968 - - - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
78. EIF4G3 ENSGALG00000010084 5881 0.968 - - - - 0.968 - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
79. DECR1 ENSGALG00000036990 6360 0.967 - - - - 0.967 - - - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
80. BRCC3 ENSGALG00000005383 4844 0.966 - - - - 0.966 - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
81. MANF ENSGALG00000002362 7518 0.966 - - - - 0.966 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
82. SH3GLB1 ENSGALG00000006284 12764 0.966 - - - - 0.966 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
83. MRPL32 ENSGALG00000037258 6861 0.966 - - - - 0.966 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
84. SUGT1 ENSGALG00000016946 22881 0.966 - - - - 0.966 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
85. RSU1 ENSGALG00000040891 12561 0.965 - - - - 0.965 - - - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
86. TPP2 ENSGALG00000016865 7509 0.965 - - - - 0.965 - - - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
87. SFRP2 ENSGALG00000009241 4716 0.964 - - - - 0.964 - - - - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
88. WDR36 ENSGALG00000000247 11277 0.963 - - - - 0.963 - - - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
89. TRAM1 ENSGALG00000041112 22876 0.962 - - - - 0.962 - - - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
90. COPA ENSGALG00000009153 11618 0.962 - - - - 0.962 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
91. ANXA11 ENSGALG00000043826 5189 0.961 - - - - 0.961 - - - - - annexin A11 [Source:NCBI gene;Acc:423637]
92. MTA1 ENSGALG00000002803 11572 0.961 - - - - 0.961 - - - - - metastasis associated 1 [Source:NCBI gene;Acc:429060]
93. SMS ENSGALG00000016379 11607 0.959 - - - - 0.959 - - - - - spermine synthase [Source:NCBI gene;Acc:418602]
94. RNF11 ENSGALG00000010539 8617 0.957 - - - - 0.957 - - - - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
95. UTP15 ENSGALG00000013510 13122 0.957 - - - - 0.957 - - - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
96. TSPAN5 ENSGALG00000012227 8703 0.956 - - - - 0.956 - - - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
97. DIABLO ENSGALG00000004412 9499 0.955 - - - - 0.955 - - - - - diablo IAP-binding mitochondrial protein, transcript variant X3
98. CCDC101 CCDC101 9111 0.951 - - - - 0.951 - - - - -
99. DYNC1LI1 ENSGALG00000011491 11011 0.949 - - - - 0.949 - - - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
100. BAMBI ENSGALG00000040993 7562 0.949 - - - - 0.949 - - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]

There are 634 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA