Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-1772

Gene Name Gene ID Reads Annotation
gga-mir-1772 ENSGALG00000025300 2892 gga-mir-1772 [Source:miRBase;Acc:MI0007515]











Genes with expression patterns similar to gga-mir-1772

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-1772 ENSGALG00000025300 2892 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-1772 [Source:miRBase;Acc:MI0007515]
2. DMB2 ENSGALG00000038393 1257 1.75 - - - - - - - 0.968 0.782 - major histocompatibility complex, class II, DM beta 2 [Source:NCBI gene;Acc:417051]
3. CEP170 ENSGALG00000010733 4177 1.738 - - - - - - - 0.946 0.792 - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
4. CHMP3 ENSGALG00000015805 11581 1.733 - - - - - - 0.807 0.926 - - charged multivesicular body protein 3
5. CARS2 ENSGALG00000016847 3814 1.693 - - - - - - - 0.986 0.707 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
6. SNAP29 ENSGALG00000040128 3581 1.687 - - - - - - 0.744 0.943 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
7. PPCS ENSGALG00000004882 5759 1.685 - - - - - - 0.728 0.957 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
8. SMDT1 ENSGALG00000011897 9360 1.652 - - - - - - 0.744 0.908 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
9. NDUFB3 ENSGALG00000008239 15511 1.63 - - - - - - 0.740 0.890 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
10. MRPL20 ENSGALG00000001542 28764 1.508 - - - - - - 0.749 0.759 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
11. HNRNPD ENSGALG00000011184 10686 1.489 - - - - - - 0.702 0.787 - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
12. PFDN1 ENSGALG00000000946 18822 1.408 - - - - - - 0.702 0.706 - - prefoldin subunit 1 [Source:NCBI gene;Acc:416142]
13. SMARCC1 ENSGALG00000032642 4842 0.992 - - - - - - - 0.992 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
14. CC2D2A ENSGALG00000014514 1180 0.992 - - - - - - - 0.992 - - coiled-coil and C2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29253]
15. ADIPOR1 ENSGALG00000000094 1862 0.99 - - - - - - - 0.990 - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
16. DCTN5 ENSGALG00000006088 3113 0.99 - - - - - - - 0.990 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
17. REXO1 ENSGALG00000001043 3179 0.99 - - - - - - - 0.990 - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
18. INOS INOS 313 0.989 - - - - - - - 0.989 - -
19. RGS17 ENSGALG00000026034 707 0.989 - - - - - - - 0.989 - - regulator of G protein signaling 17 [Source:NCBI gene;Acc:395645]
20. HDGFL2 ENSGALG00000027068 1300 0.989 - - - - - - - 0.989 - - HDGF like 2 [Source:NCBI gene;Acc:772302]
21. GTDC1 ENSGALG00000012424 1446 0.989 - - - - - - - 0.989 - - glycosyltransferase like domain containing 1 [Source:NCBI gene;Acc:424304]
22. C7orf25 ENSGALG00000040161 694 0.989 - - - - - - - 0.989 - - chromosome 7 open reading frame 25 [Source:HGNC Symbol;Acc:HGNC:21703]
23. PNISR ENSGALG00000015483 7711 0.989 - - - - - - - 0.989 - - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
24. H3-I H3-I 1498 0.989 - - - - - - - 0.989 - -
25. ARRDC4 ENSGALG00000007012 1039 0.988 - - - - - - - 0.988 - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
26. STX18 ENSGALG00000015012 1489 0.988 - - - - - - - 0.988 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
27. MTMR9 ENSGALG00000016649 2055 0.988 - - - - - - - 0.988 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
28. C5orf24 ENSGALG00000006371 1573 0.987 - - - - - - - 0.987 - - chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
29. PHLPP1 ENSGALG00000012888 398 0.987 - - - - - - - 0.987 - - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
30. PKP4 ENSGALG00000012561 3087 0.987 - - - - - - - 0.987 - - plakophilin 4 [Source:NCBI gene;Acc:424328]
31. RP9 ENSGALG00000035453 1186 0.987 - - - - - - - 0.987 - - retinitis pigmentosa 9 (autosomal dominant)
32. BTG1L ENSGALG00000004676 2293 0.987 - - - - - - - 0.987 - - protein BTG1-like
33. MYH15 ENSGALG00000015358 6304 0.986 - - - - - - - 0.986 - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
34. APOOL ENSGALG00000006978 1953 0.986 - - - - - - - 0.986 - - apolipoprotein O like [Source:NCBI gene;Acc:422271]
35. ITGA9 ENSGALG00000029378 415 0.986 - - - - - - - 0.986 - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
36. DNAJA1 ENSGALG00000023066 3820 0.986 - - - - - - - 0.986 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
37. TFEB ENSGALG00000039878 881 0.986 - - - - - - - 0.986 - - transcription factor EB [Source:NCBI gene;Acc:419922]
38. AMMECR1L ENSGALG00000026728 2134 0.986 - - - - - - - 0.986 - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
39. DEPDC7 ENSGALG00000011681 1181 0.986 - - - - - - - 0.986 - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
40. TRPC6 ENSGALG00000029416 281 0.986 - - - - - - - 0.986 - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
41. RGS9 ENSGALG00000029610 112 0.985 - - - - - - - 0.985 - - regulator of G protein signaling 9 [Source:HGNC Symbol;Acc:HGNC:10004]
42. NEMF ENSGALG00000012263 2250 0.985 - - - - - - - 0.985 - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
43. METTL22 ENSGALG00000033603 696 0.985 - - - - - - - 0.985 - - methyltransferase like 22 [Source:NCBI gene;Acc:425865]
44. ALG9 ENSGALG00000021174 745 0.985 - - - - - - - 0.985 - - ALG9, alpha-1,2-mannosyltransferase, transcript variant X5
45. REV3L ENSGALG00000015033 1917 0.984 - - - - - - - 0.984 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
46. PYCR1 ENSGALG00000007300 7987 0.984 - - - - - - - 0.984 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
47. ZC3H3 ENSGALG00000043265 1638 0.984 - - - - - - - 0.984 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
48. FIGN ENSGALG00000011069 311 0.984 - - - - - - - 0.984 - - fidgetin, microtubule severing factor [Source:HGNC Symbol;Acc:HGNC:13285]
49. CHAF1A ENSGALG00000001126 6506 0.984 - - - - - - - 0.984 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
50. IRX1 ENSGALG00000030991 1474 0.984 - - - - - - - 0.984 - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
51. ATP8B4 ENSGALG00000002326 456 0.984 - - - - - - - 0.984 - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
52. TMEM59 ENSGALG00000010746 4669 0.984 - - - - - - - 0.984 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
53. DUSP14 ENSGALG00000027641 3662 0.984 - - - - - - - 0.984 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
54. NSRP1 ENSGALG00000004186 1683 0.984 - - - - - - - 0.984 - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
55. NGEF ENSGALG00000036327 1048 0.983 - - - - - - - 0.983 - - neuronal guanine nucleotide exchange factor [Source:NCBI gene;Acc:424744]
56. TRMT44 ENSGALG00000015594 1490 0.983 - - - - - - - 0.983 - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
57. ABCA3 ENSGALG00000037837 1606 0.983 - - - - - - - 0.983 - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
58. SRP72 ENSGALG00000011403 13666 0.981 - - - - - - - 0.981 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
59. FGF18 ENSGALG00000002203 551 0.981 - - - - - - - 0.981 - - fibroblast growth factor 18 [Source:NCBI gene;Acc:395453]
60. NR2F2 ENSGALG00000007000 4911 0.981 - - - - - - - 0.981 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
61. TMEM57 ENSGALG00000001067 3367 0.981 - - - - - - - 0.981 - - transmembrane protein 57 [Source:NCBI gene;Acc:419590]
62. KHDRBS1 ENSGALG00000003272 4249 0.981 - - - - - - - 0.981 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
63. ENSGALG00000014190 ENSGALG00000014190 5735 0.98 - - - - - - - 0.980 - -
64. GOLGB1 ENSGALG00000041494 2376 0.979 - - - - - - - 0.979 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
65. BRCC3 ENSGALG00000005383 4844 0.978 - - - - - - - 0.978 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
66. NET1 ENSGALG00000008437 9850 0.977 - - - - - - - 0.977 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
67. UCK2 ENSGALG00000003510 2512 0.977 - - - - - - - 0.977 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
68. RNF214 ENSGALG00000036993 3729 0.976 - - - - - - - 0.976 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
69. KDM4A ENSGALG00000010074 7219 0.976 - - - - - - - 0.976 - - lysine demethylase 4A
70. TUBAL3 ENSGALG00000008444 2979 0.975 - - - - - - - 0.975 - - tubulin alpha like 3 [Source:NCBI gene;Acc:416694]
71. PEO1 PEO1 6747 0.974 - - - - - - - 0.974 - -
72. TCEA1 ENSGALG00000015274 2706 0.974 - - - - - - - 0.974 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
73. TRIM24 ENSGALG00000012823 2725 0.973 - - - - - - - 0.973 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
74. SLC25A1 ENSGALG00000041760 4744 0.971 - - - - - - - 0.971 - - solute carrier family 25 member 1, transcript variant X2
75. TXNDC5 ENSGALG00000012784 4678 0.97 - - - - - - - 0.970 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
76. ACSL1 ENSGALG00000010628 2560 0.97 - - - - - - - 0.970 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
77. LIG3 ENSGALG00000002288 7198 0.97 - - - - - - - 0.970 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
78. ARHGEF4 ENSGALG00000002193 558 0.968 - - - - - - - 0.968 - - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
79. NUP210L 370 0.968 - - - - - - - 0.968 - - nucleoporin 210 like
80. ARFRP1 ENSGALG00000006101 3743 0.968 - - - - - - - 0.968 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
81. SMC6 ENSGALG00000016467 3321 0.968 - - - - - - - 0.968 - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
82. MAST2 ENSGALG00000010313 2975 0.968 - - - - - - - 0.968 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
83. USP32 ENSGALG00000005350 1686 0.967 - - - - - - - 0.967 - - ubiquitin specific peptidase 32, transcript variant X2
84. gga-mir-1306 ENSGALG00000025271 1231 0.967 - - - - - - - 0.967 - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
85. LATS2 4776 0.965 - - - - - - - 0.965 - - large tumor suppressor kinase 2
86. SMIM12 ENSGALG00000030261 5860 0.965 - - - - - - - 0.965 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
87. MTERFD1 MTERFD1 3640 0.964 - - - - - - - 0.964 - -
88. BAZ1B ENSGALG00000029408 5921 0.963 - - - - - - - 0.963 - - bromodomain adjacent to zinc finger domain 1B [Source:HGNC Symbol;Acc:HGNC:961]
89. EFHD1 ENSGALG00000001428 2831 0.962 - - - - - - - 0.962 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
90. UBAC2 ENSGALG00000016880 1343 0.96 - - - - - - - 0.960 - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
91. VGLL4 ENSGALG00000004937 3762 0.957 - - - - - - - 0.957 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
92. EDEM1 ENSGALG00000008320 3117 0.955 - - - - - - - 0.955 - - ER degradation enhancing alpha-mannosidase like protein 1 [Source:NCBI gene;Acc:416110]
93. CHMP6 ENSGALG00000026428 18026 0.954 - - - - - - - 0.954 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
94. GLG1 ENSGALG00000039818 6221 0.952 - - - - - - - 0.952 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
95. CCDC61 ENSGALG00000006714 8066 0.952 - - - - - - - 0.952 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
96. WASH1 WASH1 3240 0.951 - - - - - - - 0.951 - -
97. BCLAF1 ENSGALG00000013935 7596 0.95 - - - - - - - 0.950 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
98. FBXO33 ENSGALG00000010192 2917 0.948 - - - - - - - 0.948 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
99. FGFR1OP ENSGALG00000011423 2418 0.946 - - - - - - - 0.946 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
100. KCNB1 ENSGALG00000004758 620 0.946 - - - - - - - 0.946 - - potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]

There are 368 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA