Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-1725

Gene Name Gene ID Reads Annotation
gga-mir-1725 gga-mir-1725 178











Genes with expression patterns similar to gga-mir-1725

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-1725 gga-mir-1725 178 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. RASAL2 ENSGALG00000004323 55 0.935 - - - - - - - 0.935 - - RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]
3. GREM1 ENSGALG00000009724 70 0.922 - - - - - - - 0.922 - - gremlin 1, DAN family BMP antagonist [Source:NCBI gene;Acc:395826]
4. FAM221A ENSGALG00000010977 695 0.893 - - - - - - - - 0.893 - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]
5. GGA.16412 GGA.16412 846 0.884 - - - - - - - - 0.884 -
6. GMFB ENSGALG00000012208 894 0.877 - - - - - - - - 0.877 - glia maturation factor beta [Source:NCBI gene;Acc:423560]
7. KIAA1211 ENSGALG00000013771 135 0.869 - - - - - - - - 0.869 - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
8. ENSGALG00000000346 ENSGALG00000000346 130 0.867 - - - - - - - 0.867 - -
9. CCNO ENSGALG00000028595 68 0.867 - - - - - - - 0.867 - - cyclin O [Source:HGNC Symbol;Acc:HGNC:18576]
10. GNG13 ENSGALG00000005293, ENSGALG00000038594 73 0.867 - - - - - - - 0.867 - - G protein subunit gamma 13 [Source:NCBI gene;Acc:771014]
11. MFAP2 ENSGALG00000030647 235 0.867 - - - - - - - 0.867 - - microfibril associated protein 2 [Source:HGNC Symbol;Acc:HGNC:7033]
12. AHSA2 1504 0.861 - - - - - - - - 0.861 - AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
13. GPSM1 ENSGALG00000001797 943 0.86 - - - - - - - - 0.860 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
14. LEMD3 ENSGALG00000009873 347 0.853 - - - - - - - - 0.853 - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
15. SEP-05_15 SEP-05_15 568 0.852 - - - - - - - - 0.852 -
16. NBR1 ENSGALG00000002765 629 0.851 - - - - - - - - 0.851 - NBR1, autophagy cargo receptor [Source:HGNC Symbol;Acc:HGNC:6746]
17. ASNS ENSGALG00000009748 11822 0.848 - - - - - - - - 0.848 - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
18. CCDC171 ENSGALG00000015103 349 0.847 - - - - - - - - 0.847 - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
19. CARKD CARKD 2914 0.845 - - - - - - - - 0.845 -
20. AKTIP ENSGALG00000033378 1991 0.844 - - - - - - - - 0.844 - AKT interacting protein [Source:NCBI gene;Acc:415720]
21. VPS33A ENSGALG00000004440 2030 0.841 - - - - - - - - 0.841 - VPS33A, CORVET/HOPS core subunit, transcript variant X1
22. C16orf93 C16orf93 3351 0.838 - - - - - - - - 0.838 -
23. CCDC104 CCDC104 6584 0.838 - - - - - - - - 0.838 -
24. CLP1 ENSGALG00000007370 2047 0.835 - - - - - - - - 0.835 - cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:423131]
25. IPO8 ENSGALG00000012953 499 0.834 - - - - - - - - 0.834 - importin 8 [Source:HGNC Symbol;Acc:HGNC:9853]
26. SNW1 ENSGALG00000010501 17767 0.832 - - - - - - - - 0.832 - SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
27. CEP104 ENSGALG00000000978 1130 0.831 - - - - - - - - 0.831 - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
28. ACL ACL 1813 0.83 - - - - - - - - 0.830 -
29. ENSGALG00000010113 ENSGALG00000010113 508 0.83 - - - - - - - 0.830 - -
30. ACAA1 ENSGALG00000005860 1354 0.829 - - - - - - - - 0.829 - acetyl-CoA acyltransferase 1 [Source:NCBI gene;Acc:770094]
31. VTI1A ENSGALG00000008880 279 0.828 - - - - - - - - 0.828 - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
32. REXO4 ENSGALG00000030609 2926 0.828 - - - - - - - - 0.828 - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
33. TDRD7 ENSGALG00000012350 594 0.826 - - - - - - - - 0.826 - tudor domain containing 7 [Source:NCBI gene;Acc:430492]
34. TSC22D3 ENSGALG00000027069 1222 0.825 - - - - - - - - 0.825 - TSC22 domain family member 3 [Source:NCBI gene;Acc:768091]
35. PSMG2 ENSGALG00000013863 351 0.823 - - - - - - - - 0.823 - proteasome assembly chaperone 2 [Source:HGNC Symbol;Acc:HGNC:24929]
36. MRPS18A ENSGALG00000010296 11039 0.821 - - - - - - - - 0.821 - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
37. NSDHL ENSGALG00000007493 3126 0.821 - - - - - - - - 0.821 - NAD(P) dependent steroid dehydrogenase-like [Source:HGNC Symbol;Acc:HGNC:13398]
38. DLG3 ENSGALG00000041900 3016 0.821 - - - - - - - - 0.821 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
39. TTPA ENSGALG00000030031 500 0.82 - - - - - - - - 0.820 - alpha tocopherol transfer protein [Source:HGNC Symbol;Acc:HGNC:12404]
40. C13H5ORF41 C13H5ORF41 1051 0.82 - - - - - - - - 0.820 -
41. TRMT12 ENSGALG00000006773 707 0.82 - - - - - - - - 0.820 - tRNA methyltransferase 12 homolog [Source:HGNC Symbol;Acc:HGNC:26091]
42. CEP70 ENSGALG00000012087 7992 0.819 - - - - - - - - 0.819 - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
43. SMPDL3B ENSGALG00000000737 223 0.818 - - - - - - - - 0.818 - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
44. TMEM177 ENSGALG00000011593 311 0.815 - - - - - - - - 0.815 - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
45. gga-mir-1466 ENSGALG00000025170 487 0.814 - - - - - - - - 0.814 - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
46. RNASEH1 ENSGALG00000016389 2694 0.813 - - - - - - - - 0.813 - ribonuclease H1 [Source:NCBI gene;Acc:395848]
47. CDERMO-1 CDERMO-1 279 0.813 - - - - - - - - 0.813 -
48. C6H10ORF46 C6H10ORF46 1107 0.81 - - - - - - - - 0.810 -
49. CLCN7 ENSGALG00000030826 3173 0.81 - - - - - - - - 0.810 - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
50. NUDT6 ENSGALG00000011834 1309 0.808 - - - - - - - - 0.808 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
51. BEAN1 ENSGALG00000005266 1359 0.808 - - - - - - - - 0.808 - brain expressed, associated with NEDD4, 1 [Source:NCBI gene;Acc:415796]
52. TMEM69 ENSGALG00000010279 716 0.807 - - - - - - - - 0.807 - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
53. DIAPH1 DIAPH1 357 0.807 - - - - - - - - 0.807 -
54. CDADC1 ENSGALG00000017004 232 0.807 - - - - - - 0.807 - - - cytidine and dCMP deaminase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20299]
55. C4orf27 C4orf27 16724 0.806 - - - - - - - - 0.806 -
56. FOXM1 ENSGALG00000013420 2274 0.804 - - - - - - - - 0.804 - forkhead box M1 [Source:NCBI gene;Acc:430534]
57. GNG10 ENSGALG00000015683 6905 0.804 - - - - - 0.804 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
58. ENSGALG00000019710 ENSGALG00000019710 212 0.804 - - - - - - - - 0.804 -
59. DDX28 ENSGALG00000003415 979 0.803 - - - - - - - - 0.803 - DEAD-box helicase 28
60. TMEM59 ENSGALG00000010746 4669 0.801 - - - - - - - - 0.801 - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
61. CKB ENSGALG00000011511 2100 0.801 - - - - - 0.801 - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
62. GALT ENSGALG00000026195 2002 0.799 - - - - - - - - 0.799 - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
63. RPS6KA5 ENSGALG00000030580 218 0.798 - - - - - - - - 0.798 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]
64. ENSGALG00000014946 ENSGALG00000014946 40 0.798 - - - - - - - - 0.798 -
65. ENSGALG00000003611 ENSGALG00000003611 22 0.796 - - - - - - - 0.796 - -
66. IST1 ENSGALG00000000811 10527 0.795 - - - - - - - - 0.795 - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
67. PIGB ENSGALG00000037734 2193 0.795 - - - - - - - - 0.795 - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
68. PDCD4 ENSGALG00000008700 574 0.794 - - - - - - - - 0.794 - programmed cell death 4 [Source:NCBI gene;Acc:374191]
69. ARL14EP ENSGALG00000012139 4690 0.794 - - - - - - - - 0.794 - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
70. PPIP5K2 ENSGALG00000015264 862 0.794 - - - - - - - - 0.794 - diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:29035]
71. MMD2 ENSGALG00000004530 167 0.793 - - - - - 0.793 - - - - monocyte to macrophage differentiation associated 2 [Source:HGNC Symbol;Acc:HGNC:30133]
72. GPR37L1 ENSGALG00000000607 166 0.793 - - - - - - - 0.793 - - G protein-coupled receptor 37 like 1 [Source:HGNC Symbol;Acc:HGNC:14923]
73. DENND6A ENSGALG00000005656 831 0.793 - - - - - - - - 0.793 - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
74. PJA2 ENSGALG00000000264 1574 0.793 - - - - - - - - 0.793 - praja ring finger ubiquitin ligase 2, transcript variant X1
75. SLC7A6OS ENSGALG00000035575 2878 0.792 - - - - - - - - 0.792 - solute carrier family 7 member 6 opposite strand [Source:NCBI gene;Acc:415621]
76. NLE1 ENSGALG00000004691, ENSGALG00000036963 1239 0.792 - - - - - - - - 0.792 - notchless homolog 1, transcript variant X1
77. COL14A1 ENSGALG00000037675 2652 0.791 - - - - - 0.791 - - - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
78. CCDC103 CCDC103 362 0.791 - - - - - - - - 0.791 -
79. PCDH20 ENSGALG00000016934 187 0.79 - - - - - - - - 0.790 - protocadherin 20
80. PPP1R13B ENSGALG00000011548 88 0.789 - - - - - - - - 0.789 - protein phosphatase 1 regulatory subunit 13B [Source:HGNC Symbol;Acc:HGNC:14950]
81. PKP2 ENSGALG00000012913 2547 0.789 - - - - - - - - 0.789 - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
82. GNA12 ENSGALG00000004368 692 0.788 - - - - - - - - 0.788 - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
83. RREB1 ENSGALG00000012799 125 0.788 - - - - - - - - 0.788 - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
84. ITGB1BP2 ENSGALG00000005493 628 0.787 - - - - - - - - 0.787 - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
85. C1GALT1 ENSGALG00000009752 7148 0.787 - - - - - - - - 0.787 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
86. MCCC2L ENSGALG00000011255 889 0.785 - - - - - - - - 0.785 - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
87. VIP ENSGALG00000013604 153 0.785 - - - - - 0.785 - - - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
88. SOX6 ENSGALG00000006074 102 0.784 - - - - - - - 0.784 - - Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
89. ADAMTS18 ENSGALG00000005347 17 0.784 - - - - - - - 0.784 - - ADAM metallopeptidase with thrombospondin type 1 motif 18 [Source:HGNC Symbol;Acc:HGNC:17110]
90. ACVR2B ENSGALG00000006158 8692 0.784 - - - - - 0.784 - - - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
91. TYSND1 ENSGALG00000033807 716 0.783 - - - - - - - - 0.783 - trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
92. ATP6V0A2 ENSGALG00000003194 4824 0.782 - - - - - - - - 0.782 - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
93. LOC419390 ENSGALG00000001136 607 0.782 - - - - - - - - 0.782 - hairy and enhancer of split 5-like, transcript variant X1
94. EPHB2 ENSGALG00000004741 390 0.782 - - - - - - - - 0.782 - EPH receptor B2 [Source:NCBI gene;Acc:396513]
95. TAPT1 ENSGALG00000014486 2022 0.782 - - - - - - - - 0.782 - transmembrane anterior posterior transformation 1 [Source:NCBI gene;Acc:422824]
96. TATDN3 ENSGALG00000009811 1851 0.781 - - - - - - - - 0.781 - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
97. ENSGALG00000020497 ENSGALG00000020497 446 0.78 - - - - - - - - 0.780 -
98. NUP133 ENSGALG00000011091 3804 0.78 - - - - - - - - 0.780 - nucleoporin 133 [Source:HGNC Symbol;Acc:HGNC:18016]
99. DYNLT3 ENSGALG00000016259 340 0.78 - - - - - - - - 0.780 - dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:418580]
100. DARS ENSGALG00000012355 2887 0.78 - - - - - - - - 0.780 - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]

There are 142 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA