Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-1723

Gene Name Gene ID Reads Annotation
gga-mir-1723 ENSGALG00000025386 6662 gga-mir-1723 [Source:miRBase;Acc:MI0007460]











Genes with expression patterns similar to gga-mir-1723

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-1723 ENSGALG00000025386 6662 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-1723 [Source:miRBase;Acc:MI0007460]
2. WLS ENSGALG00000011238 20969 1.768 - - - - - - 0.905 0.863 - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
3. PELI1 ENSGALG00000008837 11561 1.664 - - 0.702 - - - 0.962 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
4. DDX18 ENSGALG00000012147 12463 1.658 - - 0.717 - - - 0.941 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
5. DIS3 ENSGALG00000016930 3696 0.998 - - - - - - 0.998 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
6. ZNF276 ENSGALG00000000513 2410 0.998 - - - - - - 0.998 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
7. SNAPIN ENSGALG00000026796 11155 0.998 - - - - - - 0.998 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
8. CSDE1 ENSGALG00000002139 1683 0.998 - - - - - - 0.998 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
9. CHL1 ENSGALG00000037856 1565 0.998 - - - - - - 0.998 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
10. ENSGALG00000006730 ENSGALG00000006730 3695 0.998 - - - - - - 0.998 - - -
11. C6H10ORF32 C6H10ORF32 7694 0.998 - - - - - - 0.998 - - -
12. ATPAF2 ENSGALG00000004926 3393 0.998 - - - - - - 0.998 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
13. GCAT ENSGALG00000012312 7906 0.998 - - - - - - 0.998 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
14. GLT8D1 ENSGALG00000001642 4232 0.998 - - - - - - 0.998 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
15. CCDC90B ENSGALG00000037072 5088 0.998 - - - - - - 0.998 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
16. LHFPL2 ENSGALG00000004437 500 0.998 - - - - - - 0.998 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
17. RPUSD4 ENSGALG00000024326 3788 0.998 - - - - - - 0.998 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
18. LUZP2 ENSGALG00000030151 585 0.998 - - - - - - 0.998 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
19. MAPT ENSGALG00000000625 659 0.998 - - - - - - 0.998 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
20. CRAC1A CRAC1A 5265 0.998 - - - - - - 0.998 - - -
21. LOC425795 ENSGALG00000027696 2357 0.998 - - - - - - 0.998 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
22. GALNTL4 GALNTL4 3548 0.998 - - - - - - 0.998 - - -
23. LYVE1 ENSGALG00000005643 1230 0.998 - - - - - - 0.998 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
24. DNAJC10 ENSGALG00000008862 3114 0.998 - - - - - - 0.998 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
25. MYBL2 ENSGALG00000003503 15875 0.997 - - - - - - 0.997 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
26. SAV1 ENSGALG00000012341 3313 0.997 - - - - - - 0.997 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
27. MMADHC ENSGALG00000012473 9026 0.997 - - - - - - 0.997 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
28. LOC424109 ENSGALG00000008738 3932 0.996 - - - - - - 0.996 - - - alpha-aspartyl dipeptidase
29. PRKG1 ENSGALG00000003805 4654 0.996 - - - - - - 0.996 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
30. TTF1 4214 0.996 - - - - - - 0.996 - - - transcription termination factor 1
31. APITD1 APITD1 11830 0.996 - - - - - - 0.996 - - -
32. COMMD8 ENSGALG00000026279 13509 0.995 - - - - - - 0.995 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
33. USO1 ENSGALG00000010878 9506 0.995 - - - - - - 0.995 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
34. GDPD4 ENSGALG00000000690 824 0.994 - - - - - - 0.994 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
35. ETAA1 ENSGALG00000027922 1684 0.994 - - - - - - - 0.994 - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
36. FHL3 ENSGALG00000035187 9753 0.994 - - - - - - 0.994 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
37. GSDMA ENSGALG00000013495 1650 0.994 - - - - - - 0.994 - - - gasdermin A [Source:NCBI gene;Acc:426132]
38. SRFBP1 ENSGALG00000005316 6826 0.993 - - - - - - - 0.993 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
39. KLHL13 KLHL13 2712 0.993 - - - - - - - 0.993 - -
40. SERBP1 ENSGALG00000011229 30489 0.993 - - - - - - 0.993 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
41. C1orf123 ENSGALG00000026516 3227 0.993 - - - - - - - 0.993 - - chromosome 1 open reading frame 123 [Source:HGNC Symbol;Acc:HGNC:26059]
42. C2CD5 ENSGALG00000013210 3060 0.993 - - - - - - - 0.993 - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
43. SH3RF3 ENSGALG00000016810 2169 0.993 - - - - - - 0.993 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
44. POLR2C ENSGALG00000001168 10703 0.993 - - - - - - 0.993 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
45. TMEM237 ENSGALG00000008381 1317 0.992 - - - - - - - 0.992 - - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
46. CTNNBL1 ENSGALG00000006817 6765 0.992 - - - - - - 0.992 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
47. LAMA4 ENSGALG00000015001 993 0.992 - - - - - - - 0.992 - - laminin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6484]
48. CCAR1 ENSGALG00000004108 13219 0.992 - - - - - - 0.992 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
49. PTN ENSGALG00000040493 864 0.991 - - - - - - - 0.991 - - pleiotrophin [Source:NCBI gene;Acc:418125]
50. GAS6 ENSGALG00000016820 481 0.991 - - - - - - - 0.991 - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
51. MYO3A ENSGALG00000007647 643 0.991 - - - - - - - 0.991 - - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
52. ZUFSP 549 0.991 - - - - - - - 0.991 - - zinc finger with UFM1 specific peptidase domain
53. H2AFY2 ENSGALG00000004794 576 0.99 - - - - - - - 0.990 - - H2A histone family, member Y2 [Source:NCBI gene;Acc:423721]
54. MEIS1 ENSGALG00000041626 3865 0.99 - - - - - - - 0.990 - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
55. DENND1A ENSGALG00000001157 503 0.99 - - - - - - - 0.990 - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
56. MMP16 ENSGALG00000032031 827 0.99 - - - - - - - 0.990 - - matrix metallopeptidase 16 [Source:NCBI gene;Acc:396116]
57. PLPPR1 ENSGALG00000015542 3179 0.99 - - - - - - - 0.990 - - phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
58. SMAD1 ENSGALG00000009977 3540 0.99 - - - - - - - 0.990 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
59. FAAH ENSGALG00000010433 3309 0.99 - - - - - - - 0.990 - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
60. ARID1B ENSGALG00000013683 3397 0.99 - - - - - - - 0.990 - - AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
61. ARRDC2 ENSGALG00000003527 1797 0.99 - - - - - - - 0.990 - - arrestin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25225]
62. ENSGALG00000029113 ENSGALG00000029113 737 0.99 - - - - - - - 0.990 - -
63. CACTIN ENSGALG00000024391 1408 0.99 - - - - - - - 0.990 - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
64. SPINT1 ENSGALG00000008469 5735 0.99 - - - - - - 0.990 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
65. PSMD13 ENSGALG00000043684 14720 0.99 - - - - - - 0.990 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
66. ARHGEF12 ENSGALG00000006663 1369 0.99 - - - - - - - 0.990 - - Rho guanine nucleotide exchange factor 12 [Source:HGNC Symbol;Acc:HGNC:14193]
67. PTER ENSGALG00000008728 162 0.99 - - - - - - - 0.990 - - phosphotriesterase related [Source:HGNC Symbol;Acc:HGNC:9590]
68. LTN1 ENSGALG00000015804 3784 0.99 - - - - - - - 0.990 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
69. CDK14 ENSGALG00000009062 995 0.99 - - - - - - - 0.990 - - cyclin dependent kinase 14 [Source:HGNC Symbol;Acc:HGNC:8883]
70. RFLB RFLB 140 0.989 - - - - - - - 0.989 - -
71. LIN28A ENSGALG00000036022 542 0.989 - - - - - - - 0.989 - - lin-28 homolog A [Source:NCBI gene;Acc:428206]
72. LEMD2 ENSGALG00000002870 2803 0.989 - - - - - - - 0.989 - - LEM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21244]
73. C14orf105 C14orf105 135 0.989 - - - - - - - 0.989 - -
74. PIK3R3 ENSGALG00000010335 374 0.989 - - - - - - - 0.989 - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
75. PPP3CB ENSGALG00000005243 8794 0.989 - - - - - - 0.989 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
76. GALNT2 ENSGALG00000011106 167 0.989 - - - - - - - 0.989 - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:4124]
77. FNDC5 ENSGALG00000003567 3328 0.989 - - - - - - - 0.989 - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
78. NOB1 ENSGALG00000000693 15442 0.989 - - - - - - 0.989 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
79. PCP4 ENSGALG00000022819 880 0.988 - - - - - - - 0.988 - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
80. SEMA7A ENSGALG00000001412 1505 0.988 - - - - - - - 0.988 - - semaphorin 7A (John Milton Hagen blood group) [Source:NCBI gene;Acc:415298]
81. ANLN 10479 0.988 - - - - - - 0.988 - - - anillin actin binding protein, transcript variant X2
82. ILKAP ENSGALG00000006253 7388 0.988 - - - - - - - 0.988 - - ILK associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:HGNC:15566]
83. TMEM245 ENSGALG00000013138 501 0.988 - - - - - - - 0.988 - - transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
84. THBS4 ENSGALG00000014804 4228 0.988 - - - - - - - 0.988 - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
85. HNRNPK ENSGALG00000012591 1109 0.987 - - - - - - - 0.987 - - heterogeneous nuclear ribonucleoprotein K, transcript variant X8
86. RNF13 ENSGALG00000010411 8749 0.987 - - - - - - 0.987 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
87. GATAD2A ENSGALG00000042900 6337 0.987 - - - - - - - 0.987 - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
88. EPHA3 ENSGALG00000015403 9811 0.987 - - - - - - 0.987 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
89. FGD5 ENSGALG00000008546 4031 0.987 - - - - - - 0.987 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
90. NPB NPB 8056 0.987 - - - - - - - 0.987 - -
91. PLEKHA3 ENSGALG00000009135 1700 0.986 - - - - - - - 0.986 - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
92. C6ORF162 C6ORF162 4217 0.986 - - - - - - - 0.986 - -
93. RERG ENSGALG00000028186 1124 0.985 - - - - - - - 0.985 - - RAS like estrogen regulated growth inhibitor [Source:HGNC Symbol;Acc:HGNC:15980]
94. MRPS15 ENSGALG00000044433 15356 0.985 - - - - - - 0.985 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
95. PSD2 ENSGALG00000030836 236 0.985 - - - - - - - 0.985 - - pleckstrin and Sec7 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:19092]
96. RIPK1 ENSGALG00000012827 3405 0.985 - - - - - - - 0.985 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
97. ABRACL ENSGALG00000013826 19445 0.985 - - - - - - 0.985 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
98. TP53INP1 ENSGALG00000041353 6890 0.985 - - - - - - 0.985 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
99. B4GALT3 ENSGALG00000022891 2825 0.985 - - - - - - - 0.985 - - beta-1,4-galactosyltransferase 3
100. LDLRAP1 ENSGALG00000001051 1657 0.985 - - - - - - - 0.985 - - low density lipoprotein receptor adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:18640]

There are 203 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA