Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-1652

Gene Name Gene ID Reads Annotation
gga-mir-1652 ENSGALG00000025444 119 gga-mir-1652 [Source:miRBase;Acc:MI0007384]











Genes with expression patterns similar to gga-mir-1652

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-1652 ENSGALG00000025444 119 7 - 1.000 1.000 - 1.000 1.000 1.000 1.000 - 1.000 gga-mir-1652 [Source:miRBase;Acc:MI0007384]
2. FAM120B ENSGALG00000011180 101 1.793 - - - - 0.793 - 1.000 - - - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
3. GNG4 ENSGALG00000010986 23 1.431 - - - - 0.716 0.715 - - - - G protein subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:4407]
4. WNT9A ENSGALG00000005401 7 1 - - - - - - 1.000 - - - Wnt family member 9A [Source:NCBI gene;Acc:395829]
5. AMER3 ENSGALG00000041501 5 1 - - - - - - 1.000 - - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
6. PDE6C ENSGALG00000006626 6 1 - - - - - - 1.000 - - - phosphodiesterase 6C [Source:NCBI gene;Acc:395834]
7. HOXB4 ENSGALG00000000284 16 1 - - - - - - 1.000 - - - homeobox B4 [Source:NCBI gene;Acc:396230]
8. SYTL2L ENSGALG00000008326 5 1 - - - - - - 1.000 - - - synaptotagmin-like protein 2-like, transcript variant X4
9. SNAPC4 ENSGALG00000044726 36 1 - - - - - - 1.000 - - - small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
10. RBBP6_1 ENSGALG00000006043 26 1 - - - - - - 1.000 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
11. LPP ENSGALG00000007337 18 1 - - - - - - 1.000 - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
12. DDAH1 ENSGALG00000008663 8 1 - - - - - - 1.000 - - - dimethylarginine dimethylaminohydrolase 1 [Source:NCBI gene;Acc:378898]
13. AGPAT2 ENSGALG00000023517 21 1 - - - - - - 1.000 - - - 1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:325]
14. ODF1 ENSGALG00000035199 32 1 - - - - - - 1.000 - - - outer dense fiber of sperm tails 1 [Source:HGNC Symbol;Acc:HGNC:8113]
15. STK31 ENSGALG00000010980 4 1 - - - - - - 1.000 - - - serine/threonine kinase 31 [Source:HGNC Symbol;Acc:HGNC:11407]
16. DNAI2 ENSGALG00000004495 45 1 - - - - - - 1.000 - - - dynein axonemal intermediate chain 2
17. ENSGALG00000000789 ENSGALG00000000789 24 1 - - - - - - 1.000 - - -
18. ENSGALG00000018374 ENSGALG00000018374 3 1 - - - - - - 1.000 - - -
19. gga-mir-1801 ENSGALG00000025241 13 1 - - - - - - 1.000 - - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
20. CYP39A1 ENSGALG00000016710 16 1 - - - - - - 1.000 - - - cytochrome P450 family 39 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:17449]
21. GBP ENSGALG00000026152 38 1 - - - - - - 1.000 - - - Gallus gallus guanylate binding protein (GBP), mRNA. [Source:RefSeq mRNA;Acc:NM_204652]
22. JMJD4 ENSGALG00000005417 10 1 - - - - - - 1.000 - - - jumonji domain containing 4 [Source:NCBI gene;Acc:420400]
23. FAM26D ENSGALG00000014955 1 1 - - - - - - 1.000 - - - family with sequence similarity 26 member D
24. DAZL ENSGALG00000011243 34 1 - - - - - - 1.000 - - - deleted in azoospermia like [Source:NCBI gene;Acc:374054]
25. AKAP11 ENSGALG00000022739 82 1 - - - - - - - 1.000 - - A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
26. KRT20 ENSGALG00000019716 11 1 - - - - - - 1.000 - - - keratin 20 [Source:NCBI gene;Acc:420045]
27. MBLAC2 ENSGALG00000014649 16 1 - - - - - - 1.000 - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
28. INTS3 8 1 - - - - - - 1.000 - - - integrator complex subunit 3, transcript variant X2
29. TMTC4 ENSGALG00000016870 40 0.96 - - - - - - - 0.960 - - transmembrane and tetratricopeptide repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:25904]
30. ENSGALG00000027205 ENSGALG00000027205 149 0.948 - - - - - - - 0.948 - -
31. gga-mir-21 ENSGALG00000021733 42 0.946 - - 0.946 - - - - - - - gga-mir-21 [Source:miRBase;Acc:MI0004994]
32. RPS6KA3 ENSGALG00000016406 24 0.942 - - - - - - 0.942 - - - ribosomal protein S6 kinase A3 [Source:HGNC Symbol;Acc:HGNC:10432]
33. TAPP2 TAPP2 2 0.935 - - 0.935 - - - - - - -
34. DOK4 ENSGALG00000001160 2 0.935 - - 0.935 - - - - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
35. VCAM1 ENSGALG00000005257 102 0.935 - - 0.935 - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
36. PDE1A ENSGALG00000008885 4 0.935 - - 0.935 - - - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
37. RHCG ENSGALG00000006635 7 0.935 - - 0.935 - - - - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
38. PABPC1L ENSGALG00000004123 2 0.935 - - 0.935 - - - - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
39. AGRP ENSGALG00000002244 27 0.935 - - 0.935 - - - - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
40. GIF ENSGALG00000031546 2 0.935 - - 0.935 - - - - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
41. GABRG1 ENSGALG00000020143 5 0.935 - - 0.935 - - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
42. CSF3R ENSGALG00000002112 2 0.935 - - 0.935 - - - - - - - colony stimulating factor 3 receptor [Source:NCBI gene;Acc:419620]
43. ENSGALG00000009969 ENSGALG00000009969 2 0.935 - - 0.935 - - - - - - -
44. MYRFL ENSGALG00000019352 2 0.935 - - 0.935 - - - - - - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
45. FASTKD1 ENSGALG00000009841 45 0.908 - - - - 0.908 - - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
46. STARD13 ENSGALG00000017065 18 0.905 - - - - - - - 0.905 - - StAR related lipid transfer domain containing 13, transcript variant X3
47. MEST ENSGALG00000008111 1 0.905 - - - - - - - 0.905 - - mesoderm specific transcript [Source:HGNC Symbol;Acc:HGNC:7028]
48. PARP12 ENSGALG00000046187 10 0.905 - - - - - - - 0.905 - - poly(ADP-ribose) polymerase family member 12 [Source:HGNC Symbol;Acc:HGNC:21919]
49. TTLL2 ENSGALG00000011344 14 0.905 - - - - - - - 0.905 - - tubulin tyrosine ligase like 2, transcript variant X1
50. SMAP2 ENSGALG00000029244 498 0.905 - - - - - - - 0.905 - - small ArfGAP2 [Source:NCBI gene;Acc:419641]
51. ALDH6A1 ENSGALG00000010211 29 0.905 - - - - - - - 0.905 - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
52. AK8 ENSGALG00000040923 10 0.905 - - - - - - - 0.905 - - adenylate kinase 8, transcript variant X1
53. BOK ENSGALG00000005772 117 0.905 - - - - - - - 0.905 - - BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
54. SNX25 ENSGALG00000010610 31 0.905 - - - - - - - 0.905 - - sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
55. FGA ENSGALG00000009266 291 0.905 - - - - - - - 0.905 - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
56. RPS6KA6 ENSGALG00000007097 94 0.905 - - - - - - - 0.905 - - ribosomal protein S6 kinase A6 [Source:HGNC Symbol;Acc:HGNC:10435]
57. MCM9 ENSGALG00000014883 8 0.905 - - - - - - - 0.905 - - minichromosome maintenance 9 homologous recombination repair factor [Source:NCBI gene;Acc:100857742]
58. PALM ENSGALG00000026055 8 0.905 - - - - - - - 0.905 - - paralemmin [Source:NCBI gene;Acc:101750199]
59. FBXO16 7 0.905 - - - - - - - 0.905 - - F-box protein 16, transcript variant X1
60. TFRC 31 0.905 - - - - - - - 0.905 - - transferrin receptor, transcript variant X1
61. SEC16A ENSGALG00000002364 19 0.905 - - - - - - - 0.905 - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
62. AK7 ENSGALG00000011093 9 0.905 - - - - - - - 0.905 - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
63. SLC32A1 ENSGALG00000038919 61 0.903 - - 0.903 - - - - - - - solute carrier family 32 member 1 [Source:HGNC Symbol;Acc:HGNC:11018]
64. NTRK1 ENSGALG00000019019 17 0.902 - - - - - - - 0.902 - - neurotrophic receptor tyrosine kinase 1 [Source:NCBI gene;Acc:396337]
65. TMEM255A ENSGALG00000008604 7 0.902 - - - - - - - 0.902 - - transmembrane protein 255A [Source:HGNC Symbol;Acc:HGNC:26086]
66. RELN ENSGALG00000008193 43 0.902 - - - - - - - 0.902 - - reelin [Source:NCBI gene;Acc:427850]
67. WDR16 WDR16 22 0.902 - - - - - - - 0.902 - -
68. IL13RA1 ENSGALG00000044480 24 0.902 - - - - - - - 0.902 - - interleukin 13 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:5974]
69. TRIM14 ENSGALG00000015315 22 0.902 - - - - - - - 0.902 - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
70. MPZL1 ENSGALG00000015438 72 0.899 - - - - - - - 0.899 - - myelin protein zero like 1 [Source:HGNC Symbol;Acc:HGNC:7226]
71. ARSA ENSGALG00000035824 299 0.898 - - - - - - - 0.898 - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
72. TROJANZ ENSGALG00000027747 37 0.892 - - - - - - - 0.892 - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
73. PACSIN1 ENSGALG00000002802 6 0.892 - - - - - - - 0.892 - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
74. CLDN10 ENSGALG00000019114 2 0.891 - - 0.891 - - - - - - - claudin 10 [Source:NCBI gene;Acc:418790]
75. CD101 12 0.889 - - 0.889 - - - - - - - CD101 molecule, transcript variant X4
76. MZB1 ENSGALG00000044427 6 0.889 - - 0.889 - - - - - - - marginal zone B and B1 cell specific protein [Source:HGNC Symbol;Acc:HGNC:30125]
77. ASB12 ENSGALG00000007594 185 0.889 - - - - - - - 0.889 - - ankyrin repeat and SOCS box containing 12 [Source:NCBI gene;Acc:422313]
78. UPB1 ENSGALG00000006627 139 0.889 - - 0.889 - - - - - - - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
79. PCDH12 ENSGALG00000002544 36 0.885 - - 0.885 - - - - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
80. LOC431653 ENSGALG00000025921 4 0.881 - - - - 0.881 - - - - - LOC431653, transcript variant X3
81. ZNF362 ENSGALG00000026558 11 0.881 - - - - 0.881 - - - - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
82. CTNNAL1 ENSGALG00000013207 44 0.881 - - - - 0.881 - - - - - catenin alpha like 1 [Source:HGNC Symbol;Acc:HGNC:2512]
83. WEE1 ENSGALG00000005769 294 0.881 - - - - 0.881 - - - - - WEE1 G2 checkpoint kinase [Source:NCBI gene;Acc:423045]
84. ENSGALG00000027744 ENSGALG00000027744 2 0.881 - - - - 0.881 - - - - -
85. ANKRD22 ENSGALG00000028250 130 0.881 - - - - 0.881 - - - - - ankyrin repeat domain 22 [Source:NCBI gene;Acc:771419]
86. MYO1E ENSGALG00000004150 40 0.878 - - - - - - - 0.878 - - myosin IE [Source:HGNC Symbol;Acc:HGNC:7599]
87. KCTD14 ENSGALG00000017266 31 0.868 - - 0.868 - - - - - - - potassium channel tetramerization domain containing 14 [Source:NCBI gene;Acc:419029]
88. TBXA2R ENSGALG00000037888 24 0.868 - - 0.868 - - - - - - - thromboxane A2 receptor [Source:HGNC Symbol;Acc:HGNC:11608]
89. SERINC4 ENSGALG00000042029 21 0.865 - - - - - 0.865 - - - - serine incorporator 4 [Source:HGNC Symbol;Acc:HGNC:32237]
90. EFCAB6 ENSGALG00000014188 139 0.861 - - - - - - 0.861 - - - EF-hand calcium binding domain 6, transcript variant X3
91. HELB ENSGALG00000009885 8 0.859 - - 0.859 - - - - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
92. SPP2 ENSGALG00000004129 34 0.852 - - - - 0.852 - - - - - secreted phosphoprotein 2 [Source:NCBI gene;Acc:396080]
93. ARMC2 ENSGALG00000015289 18 0.851 - - - - - - - 0.851 - - armadillo repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:23045]
94. SLC35B2 ENSGALG00000010174 3 0.851 - - - - - - - 0.851 - - solute carrier family 35 member B2 [Source:HGNC Symbol;Acc:HGNC:16872]
95. PCNX PCNX 110 0.85 - - - - 0.850 - - - - -
96. CA12 ENSGALG00000003456 62 0.848 - - - - - - - 0.848 - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
97. SGK2 ENSGALG00000003537 26 0.847 - - - - - 0.847 - - - - SGK2, serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:13900]
98. PIAS2 ENSGALG00000039434 73 0.847 - - 0.847 - - - - - - - protein inhibitor of activated STAT 2 [Source:NCBI gene;Acc:416383]
99. GAD67 GAD67 146 0.846 - - 0.846 - - - - - - -
100. RDH11 ENSGALG00000009538 110 0.845 - - - - - - - 0.845 - - retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]

There are 179 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA