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Results for gga-mir-1610

Gene Name Gene ID Reads Annotation
gga-mir-1610 ENSGALG00000025580 3985 gga-mir-1610 [Source:miRBase;Acc:MI0007338]











Genes with expression patterns similar to gga-mir-1610

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-1610 ENSGALG00000025580 3985 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-1610 [Source:miRBase;Acc:MI0007338]
2. LUC7L3 ENSGALG00000007386 11944 1.513 - - - - - - 0.704 0.809 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
3. MTO1 ENSGALG00000015923 4418 0.99 - - - - - - - 0.990 - - mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
4. OCC-1 OCC-1 1887 0.987 - - - - - - - 0.987 - -
5. KMT2C 6306 0.984 - - - - - - - 0.984 - - lysine methyltransferase 2C, transcript variant X14
6. ENSGALG00000007574 ENSGALG00000007574 7695 0.982 - - - - - - - 0.982 - -
7. SERBP1 ENSGALG00000011229 30489 0.965 - - - - - - - 0.965 - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
8. PPFIBP1 ENSGALG00000014106 9864 0.96 - - - - - - - 0.960 - - PPFIA binding protein 1 [Source:NCBI gene;Acc:418219]
9. PXDN ENSGALG00000016377 4255 0.958 - - - - - - - 0.958 - - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
10. RND3 ENSGALG00000026313 9271 0.908 - - - - - - - 0.908 - - Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]
11. LIPA ENSGALG00000006378 4414 0.863 - - - - - - - 0.863 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
12. SLC26A8 ENSGALG00000040498 253 0.862 - - - - - - - 0.862 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
13. CAPN9 158 0.861 - - - - - - - 0.861 - - calpain 9
14. WNK2 ENSGALG00000038850 4712 0.861 - - - - - - - 0.861 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
15. TOR1B TOR1B 197 0.861 - - - - - - - 0.861 - -
16. SLX4 ENSGALG00000031841 1208 0.861 - - - - - - - 0.861 - - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
17. NR3C2 ENSGALG00000010035 603 0.86 - - - - - - - 0.860 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
18. LOC420160 ENSGALG00000004252 188 0.86 - - - - - - - 0.860 - - cathepsin L1-like, transcript variant X3
19. RASGEF1B 2014 0.86 - - - - - - - 0.860 - - RasGEF domain family member 1B, transcript variant X8
20. NKX-6.2 NKX-6.2 1370 0.86 - - - - - - - 0.860 - -
21. YTHDF3 ENSGALG00000039774 170 0.86 - - - - - - - 0.860 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
22. ENSGALG00000001591 ENSGALG00000001591 784 0.86 - - - - - - - 0.860 - -
23. FPGT ENSGALG00000026958 788 0.86 - - - - - - - 0.860 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
24. VASH1 ENSGALG00000043036 1235 0.86 - - - - - - - 0.860 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
25. CAPRIN2 1473 0.86 - - - - - - - 0.860 - - caprin family member 2, transcript variant X7
26. NCS1 ENSGALG00000012710 1104 0.86 - - - - - - - 0.860 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
27. KPNA4 ENSGALG00000009549 3674 0.86 - - - - - - - 0.860 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
28. AARSD1 ENSGALG00000002880 3068 0.859 - - - - - - - 0.859 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
29. SETD2 ENSGALG00000042051 2981 0.859 - - - - - - - 0.859 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
30. FTSJ2 FTSJ2 2951 0.859 - - - - - - - 0.859 - -
31. TBCE ENSGALG00000013950 3076 0.858 - - - - - - - 0.858 - - tubulin folding cofactor E
32. FNTA ENSGALG00000015397 3741 0.857 - - - - - - - 0.857 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
33. HIP1R ENSGALG00000031511 1981 0.856 - - - - - - - 0.856 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
34. SEMA3F ENSGALG00000029621 2079 0.856 - - - - - - - 0.856 - - semaphorin 3F [Source:NCBI gene;Acc:374109]
35. GNE ENSGALG00000015331 1577 0.856 - - - - - - - 0.856 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
36. CHST2 ENSGALG00000034507 6172 0.855 - - - - - - - 0.855 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
37. HMOX1 ENSGALG00000012550 1186 0.855 - - - - - - - 0.855 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
38. C2CD2 ENSGALG00000016148 2734 0.854 - - - - - - - 0.854 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
39. MAP4K5 ENSGALG00000012321 3036 0.854 - - - - - - - 0.854 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
40. FGD5 ENSGALG00000008546 4031 0.854 - - - - - - - 0.854 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
41. GNB1L ENSGALG00000001925 1981 0.854 - - - - - - - 0.854 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
42. MRPL10 ENSGALG00000014387 12386 0.853 - - - - - - - 0.853 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
43. ENSGALG00000005615 ENSGALG00000005615 4354 0.852 - - - - - - - 0.852 - -
44. C5orf63 C5orf63 3718 0.852 - - - - - - - 0.852 - -
45. CXorf23 1582 0.852 - - - - - - - 0.852 - - chromosome X open reading frame 23, transcript variant X3
46. PLA2G7 ENSGALG00000016713 2100 0.852 - - - - - - - 0.852 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
47. TLN2 2295 0.852 - - - - - - - 0.852 - - talin 2, transcript variant X5
48. WDR82 ENSGALG00000025904 4783 0.85 - - - - - - - 0.850 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
49. PAM16 9684 0.85 - - - - - - - 0.850 - - presequence translocase associated motor 16 homolog, transcript variant X2
50. EXOSC1 ENSGALG00000039917 5259 0.85 - - - - - - - 0.850 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
51. SART3 ENSGALG00000039472 4948 0.85 - - - - - - - 0.850 - - squamous cell carcinoma antigen recognized by T cells 3 [Source:HGNC Symbol;Acc:HGNC:16860]
52. CABLES1 ENSGALG00000014998 1636 0.85 - - - - - - - 0.850 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
53. DLGAP4 ENSGALG00000001046 6872 0.85 - - - - - - - 0.850 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
54. VPS26A ENSGALG00000004174 9198 0.849 - - - - - - - 0.849 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
55. UTP23 ENSGALG00000032400 3601 0.848 - - - - - - - 0.848 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
56. UBE2Q2 3861 0.848 - - - - - - - 0.848 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
57. FGD3 ENSGALG00000005237 4410 0.848 - - - - - - - 0.848 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
58. HVCN1 ENSGALG00000004562 2550 0.847 - - - - - - - 0.847 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
59. ITCH ENSGALG00000040474 2646 0.847 - - - - - - - 0.847 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
60. POLDIP2 ENSGALG00000003211 11664 0.846 - - - - - - - 0.846 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
61. CTSA ENSGALG00000006876 5380 0.844 - - - - - - - 0.844 - - cathepsin A [Source:NCBI gene;Acc:428163]
62. TAF12 ENSGALG00000000991 8709 0.842 - - - - - - - 0.842 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
63. RABL5 RABL5 5264 0.842 - - - - - - - 0.842 - -
64. EMC1 ENSGALG00000003969 6876 0.84 - - - - - - - 0.840 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
65. C1orf21 ENSGALG00000020922 4035 0.84 - - - - - - - 0.840 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
66. CPEB2 ENSGALG00000014516 1187 0.839 - - - - - - - 0.839 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
67. PTGES2 ENSGALG00000033760 11255 0.836 - - - - - - - 0.836 - - prostaglandin E synthase 2
68. TARS ENSGALG00000003288 12702 0.835 - - - - - - - 0.835 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
69. AKR1B10L3 ENSGALG00000019284 5869 0.831 - - - - - - - 0.831 - - aldo-keto reductase family 1 member B10-like 3
70. WDR45B ENSGALG00000001563 5870 0.831 - - - - - - - 0.831 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
71. METTL6 ENSGALG00000040665 4467 0.83 - - - - - - - 0.830 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
72. TYW3 ENSGALG00000032549 4869 0.829 - - - - - - - 0.829 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
73. UBE2J2 ENSGALG00000001848 6527 0.829 - - - - - - - 0.829 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
74. C10orf11 C10orf11 3087 0.829 - - - - - - - 0.829 - -
75. CDC73 ENSGALG00000002469 4586 0.828 - - - - - - - 0.828 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
76. ENSGALG00000020092 ENSGALG00000020092 3067 0.827 - - - - - - - 0.827 - -
77. MBNL2 ENSGALG00000016890 3162 0.825 - - - - - - - 0.825 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
78. SRPK2 ENSGALG00000008154 7385 0.822 - - - - - - - 0.822 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
79. MRPL28 ENSGALG00000007473 19134 0.822 - - - - - - - 0.822 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
80. PHF20L1 ENSGALG00000033205 7598 0.817 - - - - - - - 0.817 - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
81. POLR2C ENSGALG00000001168 10703 0.816 - - - - - - - 0.816 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
82. FBN3 ENSGALG00000037625 23313 0.815 - - - - - - - 0.815 - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
83. PCDH1 ENSGALG00000002553 2938 0.815 - - - - - - - 0.815 - - protocadherin 1 [Source:NCBI gene;Acc:416194]
84. SRP9 ENSGALG00000026009 12418 0.815 - - - - - - - 0.815 - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
85. TCEA2 ENSGALG00000005976 9143 0.814 - - - - - - - 0.814 - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
86. TNRC6A ENSGALG00000006068 9166 0.804 - - - - - - - 0.804 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
87. TXNDC5 ENSGALG00000012784 4678 0.795 - - - - - - 0.795 - - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
88. TIMM22 ENSGALG00000004383 7619 0.793 - - - - - - 0.793 - - - translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]
89. HIPK3 ENSGALG00000011695 6842 0.789 - - - - - - - 0.789 - - homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
90. SKA2 ENSGALG00000005090 24296 0.785 - - - - - - - 0.785 - - spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]
91. THOC2 ENSGALG00000008507 9501 0.783 - - - - - - - 0.783 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
92. NPEPL1 ENSGALG00000007533 5908 0.781 - - - - - - - 0.781 - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
93. APPBP2 ENSGALG00000005314 6447 0.778 - - - - - - - 0.778 - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
94. NUP54 ENSGALG00000011506 4945 0.776 - - - - - - 0.776 - - - nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]
95. CHRAC1 ENSGALG00000040823 5695 0.772 - - - - - - 0.772 - - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
96. ATR ENSGALG00000002663 4626 0.768 - - - - - - 0.768 - - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
97. SLC16A1 ENSGALG00000001717 18566 0.767 - - - - - - - 0.767 - - solute carrier family 16 member 1 [Source:NCBI gene;Acc:419875]
98. ASPM ENSGALG00000032398 12784 0.766 - - - - - - - 0.766 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
99. YEATS2 ENSGALG00000036356 3194 0.765 - - - - - - 0.765 - - - YEATS domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25489]
100. THOC1 ENSGALG00000014915 5846 0.763 - - - - - - 0.763 - - - Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001321610]

There are 78 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA