Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-1600

Gene Name Gene ID Reads Annotation
gga-mir-1600 ENSGALG00000025438 248 gga-mir-1600 [Source:miRBase;Acc:MI0007327]











Genes with expression patterns similar to gga-mir-1600

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-1600 ENSGALG00000025438 248 3 - 1.000 - - - 1.000 - - - 1.000 gga-mir-1600 [Source:miRBase;Acc:MI0007327]
2. DNAH7 ENSGALG00000007841 32 1.742 - - - - - 0.784 - - - 0.958 dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
3. ADH6 ENSGALG00000020160 29 1.669 - - - - - 0.808 - - - 0.861 alcohol dehydrogenase 6 (class V) [Source:NCBI gene;Acc:395979]
4. GFPT2 ENSGALG00000039705 562 1.62 - - - - - 0.808 - - - 0.812 glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
5. SYT1 ENSGALG00000041094 74 1.583 - - - - - 0.861 - - - 0.722 synaptotagmin 1 [Source:NCBI gene;Acc:396083]
6. ZC3H7B ENSGALG00000011965 6 0.991 - - - - - - - - - 0.991 zinc finger CCCH-type containing 7B [Source:HGNC Symbol;Acc:HGNC:30869]
7. GPR12 ENSGALG00000017102 4 0.988 - - - - - - - - - 0.988 G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
8. MUC4 4 0.988 - - - - - - - - - 0.988 mucin 4, cell surface associated, transcript variant X5
9. IFNG ENSGALG00000009903 5 0.988 - - - - - - - - - 0.988 interferon gamma [Source:NCBI gene;Acc:396054]
10. ROS1 ENSGALG00000014913 7 0.988 - - - - - - - - - 0.988 ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
11. SCT ENSGALG00000034822, ENSGALG00000037020 14 0.988 - - - - - - - - - 0.988 secretin, transcript variant X6
12. C2 ENSGALG00000035721 5 0.988 - - - - - - - - - 0.988 complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]
13. NCX1 NCX1 9 0.988 - - - - - - - - - 0.988
14. NOX3 ENSGALG00000013659 4 0.988 - - - - - - - - - 0.988 NADPH oxidase 3 [Source:HGNC Symbol;Acc:HGNC:7890]
15. ENSGALG00000012920 ENSGALG00000012920 8 0.988 - - - - - - - - - 0.988
16. CHST8 ENSGALG00000004903 16 0.988 - - - - - - - - - 0.988 carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]
17. CSF3 ENSGALG00000030907 11 0.985 - - - - - - - - - 0.985 colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
18. CFH ENSGALG00000002431 31 0.985 - - - - - - - - - 0.985 complement factor H, transcript variant X1
19. STOML3 ENSGALG00000017039 6 0.985 - - - - - - - - - 0.985 stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420]
20. CCR5 ENSGALG00000037077 23 0.981 - - - - - - - - - 0.981 C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
21. DENND1B ENSGALG00000002246 6 0.981 - - - - - - - - - 0.981 DENN domain containing 1B [Source:HGNC Symbol;Acc:HGNC:28404]
22. SUB1L1 ENSGALG00000027147 73 0.979 - - - - - - - - - 0.979 SUB1 homolog (S. cerevisiae)-like 1
23. LOC100858777 ENSGALG00000027624 58 0.972 - - - - - - - - - 0.972 rhodopsin, GQ-coupled-like
24. LHX9 ENSGALG00000002223 12 0.972 - - - - - - - - - 0.972 LIM homeobox 9 [Source:NCBI gene;Acc:396397]
25. ISPD ENSGALG00000010795 7 0.972 - - - - - - - - - 0.972 isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
26. ZNF770 ENSGALG00000009817 27 0.971 - - - - - - - - - 0.971 zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
27. SERPINE3 ENSGALG00000017017 32 0.968 - - - - - - - - - 0.968 serpin family E member 3 [Source:HGNC Symbol;Acc:HGNC:24774]
28. PPTC7 ENSGALG00000004550 154 0.965 - - - - - - - - - 0.965 PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
29. SPINK4 ENSGALG00000043964 50 0.961 - - - - - - - - - 0.961 serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
30. PLIN3 ENSGALG00000044632 370 0.961 - - - - - - - - - 0.961 perilipin 3, transcript variant X2
31. CPNE7 ENSGALG00000000507 54 0.959 - - - - - - - - - 0.959 copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
32. ECSCR ENSGALG00000024379 313 0.957 - - - - - - - - - 0.957 endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
33. ESM1 ENSGALG00000027707 328 0.955 - - - - - - - - - 0.955 endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]
34. TTC9 ENSGALG00000017652 16 0.955 - - - - - - - - - 0.955 tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
35. RBBP6_1 ENSGALG00000006043 26 0.955 - - - - - - - - - 0.955 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
36. ADAMTS5 ENSGALG00000015795 6 0.955 - - - - - - - - - 0.955 ADAM metallopeptidase with thrombospondin type 1 motif 5 [Source:HGNC Symbol;Acc:HGNC:221]
37. ENSGALG00000001629 ENSGALG00000001629 31 0.954 - - - - - - - - - 0.954
38. CTNNA3 ENSGALG00000002845 127 0.947 - - - - - - - - - 0.947 catenin alpha 3 [Source:NCBI gene;Acc:423648]
39. PROCR ENSGALG00000006547 645 0.945 - - - - - 0.945 - - - - protein C receptor [Source:NCBI gene;Acc:424867]
40. SDSL ENSGALG00000008317 55 0.944 - - - - - - - - - 0.944 serine dehydratase like [Source:NCBI gene;Acc:417030]
41. AQP1 ENSGALG00000005209 111 0.942 - - - - - - - - - 0.942 aquaporin 1 [Source:NCBI gene;Acc:420384]
42. LRRC3B ENSGALG00000011314 26 0.942 - - - - - - - - - 0.942 leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:HGNC:28105]
43. MISP 52 0.941 - - - - - - - - - 0.941 mitotic spindle positioning, transcript variant X2
44. LRRC49 ENSGALG00000004059 29 0.939 - - - - - - - - - 0.939 leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
45. RGS6 ENSGALG00000009368 19 0.931 - - - - - - - - - 0.931 regulator of G-protein signaling 6 [Source:NCBI gene;Acc:395618]
46. TERF2IP ENSGALG00000000903 41 0.93 - - - - - - - - - 0.930 TERF2 interacting protein [Source:NCBI gene;Acc:395122]
47. MMEL1 ENSGALG00000001115 46 0.93 - - - - - - - - - 0.930 membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
48. SNAPC1 ENSGALG00000011868 65 0.929 - - - - - - - - - 0.929 small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
49. AK5 ENSGALG00000031652 12 0.916 - - - - - - - - - 0.916 adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]
50. ENSGALG00000023119 ENSGALG00000023119 156 0.913 - - - - - - - - - 0.913
51. SPINK5 SPINK5 195 0.912 - - - - - - - - - 0.912
52. ABHD3 ENSGALG00000014938 9 0.91 - - - - - 0.910 - - - - abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
53. SPEF2 ENSGALG00000023552 23 0.91 - - - - - 0.910 - - - - sperm flagellar 2 [Source:HGNC Symbol;Acc:HGNC:26293]
54. NME8 ENSGALG00000029677 2 0.91 - - - - - 0.910 - - - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
55. SREBP-1 SREBP-1 2 0.91 - - - - - 0.910 - - - -
56. ENSGALG00000012324 ENSGALG00000012324 4 0.91 - - - - - 0.910 - - - -
57. GBF1 ENSGALG00000005637 32 0.91 - - - - - 0.910 - - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]
58. ENSGALG00000025872 ENSGALG00000025872 5 0.91 - - - - - 0.910 - - - -
59. ARHGEF26 ENSGALG00000010352 3 0.91 - - - - - 0.910 - - - - Rho guanine nucleotide exchange factor 26 [Source:HGNC Symbol;Acc:HGNC:24490]
60. CETP ENSGALG00000001234 18 0.91 - - - - - 0.910 - - - - cholesteryl ester transfer protein [Source:NCBI gene;Acc:415645]
61. ABLIM2 ENSGALG00000043448 48 0.91 - - - - - 0.910 - - - - actin binding LIM protein family member 2 [Source:HGNC Symbol;Acc:HGNC:19195]
62. MCMDC2 ENSGALG00000031863 3 0.91 - - - - - 0.910 - - - - minichromosome maintenance domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26368]
63. DUS4L ENSGALG00000023661 29 0.91 - - - - - 0.910 - - - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
64. RGR ENSGALG00000002299 17 0.91 - - - - - 0.910 - - - - retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]
65. PLA2G1BL ENSGALG00000007236 4 0.91 - - - - - 0.910 - - - - phospholipase A2, major isoenzyme-like
66. ZNF362 ENSGALG00000026558 11 0.91 - - - - - 0.910 - - - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
67. CLDN20 ENSGALG00000027634 25 0.91 - - - - - 0.910 - - - - claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
68. BCL2L14 ENSGALG00000011544 11 0.91 - - - - - 0.910 - - - - BCL2 like 14 [Source:HGNC Symbol;Acc:HGNC:16657]
69. LRIT2 ENSGALG00000002307 2 0.91 - - - - - 0.910 - - - - leucine rich repeat, Ig-like and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:23443]
70. CD320 ENSGALG00000021688 3 0.91 - - - - - 0.910 - - - - CD320 molecule [Source:NCBI gene;Acc:420066]
71. SNORA75 SNORA75 41 0.91 - - - - - 0.910 - - - -
72. B3GALT2 ENSGALG00000002477 13 0.91 - - - - - 0.910 - - - - beta-1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:917]
73. TOPAZ1 18 0.91 - - - - - 0.910 - - - - testis and ovary specific PAZ domain containing 1, transcript variant X6
74. BOK ENSGALG00000005772 117 0.91 - - - - - 0.910 - - - - BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
75. ENSGALG00000005511 ENSGALG00000005511 7 0.91 - - - - - 0.910 - - - -
76. AMY1A ENSGALG00000005147 3 0.91 - - - - - 0.910 - - - - amylase, alpha 1A; hepatic [Source:NCBI gene;Acc:414139]
77. SLN ENSGALG00000017168 3 0.91 - - - - - 0.910 - - - - sarcolipin [Source:NCBI gene;Acc:100857277]
78. ATXN7L1 ENSGALG00000008115 84 0.908 - - - - - - - - - 0.908 ataxin 7 like 1 [Source:HGNC Symbol;Acc:HGNC:22210]
79. ZNF22 ZNF22 25 0.904 - - - - - - - - - 0.904
80. PRC1 ENSGALG00000012836 20 0.894 - - - - - 0.894 - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
81. SEPP1 SEPP1 35 0.888 - - - - - 0.888 - - - -
82. ENSGALG00000026371 ENSGALG00000026371 106 0.888 - - - - - - - - - 0.888
83. STAB2 32 0.887 - - - - - - - - - 0.887 stabilin 2
84. CD300A CD300A 173 0.887 - - - - - 0.887 - - - -
85. ZNF777 ENSGALG00000038657 3 0.885 - - - - - 0.885 - - - - zinc finger protein 777 [Source:HGNC Symbol;Acc:HGNC:22213]
86. CCDC112 ENSGALG00000045092 38 0.88 - - - - - - - - - 0.880 coiled-coil domain containing 112 [Source:HGNC Symbol;Acc:HGNC:28599]
87. RFXAP ENSGALG00000019087 37 0.876 - - - - - 0.876 - - - - regulatory factor X associated protein [Source:HGNC Symbol;Acc:HGNC:9988]
88. KIAA0040 ENSGALG00000030543 53 0.872 - - - - - 0.872 - - - - KIAA0040 [Source:HGNC Symbol;Acc:HGNC:28950]
89. SERTAD4 ENSGALG00000026359 400 0.871 - - - - - - - - - 0.871 SERTA domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25236]
90. AGAP1 ENSGALG00000004045 47 0.871 - - - - - - - - - 0.871 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:16922]
91. HACD4 ENSGALG00000028142 395 0.869 - - - - - - - - - 0.869 3-hydroxyacyl-CoA dehydratase 4 [Source:HGNC Symbol;Acc:HGNC:20920]
92. IQUB ENSGALG00000008823 65 0.868 - - - - - - - - - 0.868 IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
93. WDFY4 ENSGALG00000006165 22 0.868 - - - - - 0.868 - - - - WDFY family member 4 [Source:HGNC Symbol;Acc:HGNC:29323]
94. XRCC4 ENSGALG00000015620 28 0.868 - - - - - - - - - 0.868 X-ray repair cross complementing 4 [Source:HGNC Symbol;Acc:HGNC:12831]
95. GNPDA1 ENSGALG00000040594 13 0.866 - - - - - 0.866 - - - - glucosamine-6-phosphate deaminase 1 [Source:NCBI gene;Acc:416341]
96. MTFMT ENSGALG00000007353 805 0.866 - - - - - 0.866 - - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
97. ENSGALG00000000099 ENSGALG00000000099 16 0.864 - - - - - 0.864 - - - -
98. KLHL14 ENSGALG00000036969 3 0.861 - - - - - 0.861 - - - - kelch like family member 14 [Source:NCBI gene;Acc:421100]
99. CD93 ENSGALG00000008359 235 0.859 - - - - - - - - - 0.859 CD93 molecule [Source:NCBI gene;Acc:421234]
100. ENSGALG00000007055 ENSGALG00000007055 60 0.858 - - - - - - - - - 0.858

There are 142 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA