Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gga-mir-1564

Gene Name Gene ID Reads Annotation
gga-mir-1564 ENSGALG00000043133 4645 gga-mir-1564 [Source:miRBase;Acc:MI0007289]











Genes with expression patterns similar to gga-mir-1564

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-1564 ENSGALG00000043133 4645 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gga-mir-1564 [Source:miRBase;Acc:MI0007289]
2. TP53I3 ENSGALG00000016502 178 1.443 - - 0.729 - - - - - - 0.714 tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
3. SLC30A6 ENSGALG00000010618 3197 0.848 - - - - - - - 0.848 - - solute carrier family 30 member 6 [Source:NCBI gene;Acc:421480]
4. GUK1 ENSGALG00000005336 5134 0.806 - - - - - - - 0.806 - - guanylate kinase 1 [Source:HGNC Symbol;Acc:HGNC:4693]
5. URM1 ENSGALG00000004971 17880 0.791 - - - - - - - 0.791 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
6. C3orf55 C3orf55 1682 0.791 - - - - - - - 0.791 - -
7. HERPUD2 ENSGALG00000040364 6073 0.787 - - - - - - - 0.787 - - HERPUD family member 2 [Source:HGNC Symbol;Acc:HGNC:21915]
8. STRADA ENSGALG00000000550 6912 0.784 - - - - - - - 0.784 - - STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
9. CHCHD10 ENSGALG00000028810 10389 0.774 - - - - - - - 0.774 - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559]
10. TBC1D4 ENSGALG00000016925 2961 0.77 - - - - - - - 0.770 - - TBC1 domain family member 4 [Source:HGNC Symbol;Acc:HGNC:19165]
11. MAN1C1 ENSGALG00000001038 1679 0.769 - - - - - - - 0.769 - - mannosidase alpha class 1C member 1 [Source:HGNC Symbol;Acc:HGNC:19080]
12. SPG11 ENSGALG00000008180 1890 0.768 - - - - - - - 0.768 - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
13. BNIP3L ENSGALG00000043405 10316 0.768 - - - - - - - 0.768 - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
14. ENSGALG00000023172 ENSGALG00000023172 61 0.766 - - - - - - 0.766 - - -
15. FBXO38 ENSGALG00000038627 2658 0.766 - - - - - - - 0.766 - - F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
16. UFL1 ENSGALG00000015580 3845 0.763 - - - - - - - 0.763 - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
17. ANKFN1L ENSGALG00000009205 779 0.763 - - - - - - 0.763 - - - ankyrin repeat and fibronectin type-III domain-containing 1-like, transcript variant X10
18. RFWD2 1215 0.762 - - - - - - 0.762 - - - ring finger and WD repeat domain 2, transcript variant X6
19. NPC2 ENSGALG00000010237 11180 0.762 - - - - - - - 0.762 - - Niemann-Pick disease, type C2 [Source:NCBI gene;Acc:423353]
20. PI4KA ENSGALG00000040756 3973 0.761 - - - - - - 0.761 - - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
21. FAM207A ENSGALG00000007513 8748 0.755 - - - - - - - 0.755 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
22. ATP5J 14451 0.753 - - - - - - - 0.753 - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
23. DHRS11 ENSGALG00000005403 2936 0.752 - - - - - - - 0.752 - - dehydrogenase/reductase 11 [Source:NCBI gene;Acc:395172]
24. CCDC47 ENSGALG00000000564 6584 0.75 - - - - - - - 0.750 - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
25. KCND2 ENSGALG00000009066, ENSGALG00000043515 63 0.746 - - - - - - - - - 0.746 potassium voltage-gated channel subfamily D member 2 [Source:HGNC Symbol;Acc:HGNC:6238]
26. PEX3 ENSGALG00000013777 3158 0.745 - - - - - - - 0.745 - - peroxisomal biogenesis factor 3
27. ARFIP1 ENSGALG00000041361 7351 0.743 - - - - - - - 0.743 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
28. KTN1 ENSGALG00000012137 4058 0.741 - - - - - - - 0.741 - - kinectin 1 [Source:NCBI gene;Acc:396335]
29. REV1 ENSGALG00000016766 2108 0.74 - - - - - - - 0.740 - - REV1, DNA directed polymerase [Source:NCBI gene;Acc:418703]
30. NFRKB ENSGALG00000001306 4469 0.74 - - - - - - - 0.740 - - nuclear factor related to kappaB binding protein [Source:NCBI gene;Acc:419730]
31. NEURL NEURL 221 0.739 - - - - - - - - - 0.739
32. PFKL ENSGALG00000006543 4361 0.739 - - - - - - - 0.739 - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
33. SULT2B1L1 ENSGALG00000023472 569 0.738 - - - - - - - - - 0.738 sulfotransferase family cytosolic 2B member 1-like 1
34. FAM101B FAM101B 1468 0.738 - - - - - - 0.738 - - -
35. IMPACT ENSGALG00000015093 1334 0.736 - - - - - - - 0.736 - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
36. TIPRL ENSGALG00000015246 7875 0.735 - - - - - - - 0.735 - - TOR signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:30231]
37. CHMP4B ENSGALG00000002095 17422 0.734 - - - - - - - 0.734 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
38. ADAMTS20 ENSGALG00000009572 67 0.733 - - - - - - 0.733 - - - ADAM metallopeptidase with thrombospondin type 1 motif 20 [Source:HGNC Symbol;Acc:HGNC:17178]
39. CTTN ENSGALG00000007700 709 0.732 - - - - - - 0.732 - - - cortactin [Source:NCBI gene;Acc:396455]
40. CPSF3L CPSF3L 3584 0.73 - - - - - - - 0.730 - -
41. TJP1 ENSGALG00000042552 3081 0.729 - - - - - - - 0.729 - - tight junction protein 1 [Source:HGNC Symbol;Acc:HGNC:11827]
42. SH3BP5 ENSGALG00000039337 17 0.729 - - 0.729 - - - - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
43. ECHDC1 ENSGALG00000014828 958 0.727 - - - - - - - - - 0.727 ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
44. IFT46 ENSGALG00000007438 4094 0.726 - - - - - - - 0.726 - - intraflagellar transport 46, transcript variant X1
45. TMEM258 ENSGALG00000038292 31116 0.726 - - - - - - - 0.726 - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
46. NPDC1 ENSGALG00000042635 12 0.725 - - 0.725 - - - - - - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
47. MAPKKK3L ENSGALG00000005884 1011 0.724 - - - - - - 0.724 - - - mitogen-activated protein kinase kinase kinase 3-like [Source:NCBI gene;Acc:420419]
48. RCN2 ENSGALG00000039284 17848 0.723 - - - - - - - 0.723 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
49. USP3 ENSGALG00000003427 1236 0.723 - - - - - - - - - 0.723 ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
50. ZBTB2 ENSGALG00000012966 112 0.722 - - 0.722 - - - - - - - zinc finger and BTB domain containing 2 [Source:NCBI gene;Acc:421635]
51. ELAC2 ENSGALG00000001036 2154 0.722 - - - - - - 0.722 - - - elaC ribonuclease Z 2 [Source:HGNC Symbol;Acc:HGNC:14198]
52. USP12P1 USP12P1 4193 0.722 - - - - - - 0.722 - - -
53. YRDC ENSGALG00000029001 6529 0.721 - - - - - - - 0.721 - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
54. NAA16 ENSGALG00000032808 3366 0.72 - - - - - - - 0.720 - - N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
55. TANGO2 ENSGALG00000002056 1971 0.719 - - - - - - - 0.719 - - transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
56. TNFRSF1B ENSGALG00000034213 780 0.719 - - - - - - 0.719 - - - TNF receptor superfamily member 1B [Source:NCBI gene;Acc:395083]
57. ENSGALG00000027588 ENSGALG00000027588 4871 0.719 - - - - - - - - - 0.719
58. ZNF511 ENSGALG00000003533 234 0.719 - - - - - - - - - 0.719 zinc finger protein 511 [Source:HGNC Symbol;Acc:HGNC:28445]
59. SRGAP3 ENSGALG00000008378 4331 0.718 - - - - - - - 0.718 - - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
60. gga-mir-6596 ENSGALG00000026117 2893 0.717 - - - - - - - - - 0.717 gga-mir-6596 [Source:miRBase;Acc:MI0022416]
61. GALNT7 ENSGALG00000010744 8645 0.717 - - - - - - - 0.717 - - polypeptide N-acetylgalactosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4129]
62. FAM211B FAM211B 3808 0.717 - - - - - - - 0.717 - -
63. ZFYVE26 ENSGALG00000028762 18 0.717 - - 0.717 - - - - - - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
64. FKBP7 ENSGALG00000009149 6742 0.715 - - - - - - - 0.715 - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
65. SMG6 ENSGALG00000003108 5342 0.715 - - 0.715 - - - - - - - SMG6, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:17809]
66. ATL2 ENSGALG00000037289 7926 0.714 - - - - - - - 0.714 - - atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
67. MOB3A ENSGALG00000031729 9690 0.714 - - - - - - - 0.714 - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
68. STAT3 ENSGALG00000003267 2351 0.713 - - - - - - - 0.713 - - signal transducer and activator of transcription 3 [Source:NCBI gene;Acc:420027]
69. LOC418544 ENSGALG00000019175 19 0.712 - - 0.712 - - - - - - - cystathionine beta-synthase-like
70. SPRTN ENSGALG00000011065 24 0.712 - - 0.712 - - - - - - - SprT-like N-terminal domain [Source:HGNC Symbol;Acc:HGNC:25356]
71. PDGFRB ENSGALG00000030613 4 0.711 - - 0.711 - - - - - - - platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]
72. ENSGALG00000012002 ENSGALG00000012002 4 0.711 - - 0.711 - - - - - - -
73. B4GALT6 ENSGALG00000015151 2770 0.711 - - - - - - - 0.711 - - beta-1,4-galactosyltransferase 6 [Source:NCBI gene;Acc:421092]
74. DMB1 ENSGALG00000000162 7 0.711 - - 0.711 - - - - - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
75. C1H13ORF27 C1H13ORF27 635 0.711 - - - - - - - - - 0.711
76. GZMM ENSGALG00000015192 8 0.711 - - 0.711 - - - - - - - granzyme M
77. H2B-V H2B-V 24 0.711 - - 0.711 - - - - - - -
78. DERL3 ENSGALG00000005994 1499 0.71 - - - - - - 0.710 - - - derlin 3 [Source:NCBI gene;Acc:416934]
79. AMBRA1 ENSGALG00000008358 2865 0.71 - - - - - - - 0.710 - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
80. PGF ENSGALG00000026557 33 0.71 - - 0.710 - - - - - - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
81. ACSL3 ENSGALG00000005206 1763 0.709 - - - - - - - - - 0.709 acyl-CoA synthetase long chain family member 3 [Source:HGNC Symbol;Acc:HGNC:3570]
82. AGPAT9 AGPAT9 1823 0.708 - - - - - - - - - 0.708
83. BDH1B ENSGALG00000006976 9 0.708 - - 0.708 - - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
84. METTL25 1538 0.708 - - - - - - - - - 0.708 methyltransferase like 25, transcript variant X1
85. DFFA ENSGALG00000002820 2046 0.707 - - 0.707 - - - - - - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
86. PTPN6 ENSGALG00000014561 1399 0.707 - - - - - - - 0.707 - - protein tyrosine phosphatase, non-receptor type 6 [Source:NCBI gene;Acc:427947]
87. TBRG4 ENSGALG00000038102 9269 0.707 - - - - - - - 0.707 - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
88. AARS ENSGALG00000001965 1474 0.705 - - - - - - - 0.705 - - alanyl-tRNA synthetase [Source:NCBI gene;Acc:415668]
89. VSX2 ENSGALG00000033517 30 0.704 - - 0.704 - - - - - - - visual system homeobox 2 [Source:NCBI gene;Acc:395536]
90. NQO2 ENSGALG00000025747 2287 0.704 - - 0.704 - - - - - - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
91. ENSGALG00000004283 ENSGALG00000004283 4771 0.704 - - - - - - - 0.704 - -
92. ENSGALG00000021439 ENSGALG00000021439 628 0.703 - - - - - - - - - 0.703
93. KIAA1671 ENSGALG00000005512 2540 0.703 - - - - - - - 0.703 - - KIAA1671 [Source:NCBI gene;Acc:768701]
94. EPDR1 ENSGALG00000042063 1066 0.703 - - - - - - - - - 0.703 ependymin related 1
95. RPN2 ENSGALG00000003815 18864 0.703 - - - - - - - - - 0.703 ribophorin II [Source:NCBI gene;Acc:419177]
96. B4GAL-T7 B4GAL-T7 12356 0.702 - - - - - - - 0.702 - -
97. CTDSPL2 ENSGALG00000008199 3534 0.702 - - - - - - - 0.702 - - CTD small phosphatase like 2 [Source:NCBI gene;Acc:415574]
98. JAZF1 ENSGALG00000030455 1425 0.702 - - - - - - - 0.702 - - JAZF zinc finger 1 [Source:NCBI gene;Acc:420633]
99. PTBP3 ENSGALG00000015669 16 0.702 - - 0.702 - - - - - - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
100. DHX30 ENSGALG00000039830 5187 0.701 - - - - - - - - 0.701 - DExH-box helicase 30 [Source:NCBI gene;Acc:420376]

There are 2 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA