Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-1556

Gene Name Gene ID Reads Annotation
gga-mir-1556 ENSGALG00000025512 2 gga-mir-1556 [Source:miRBase;Acc:MI0007281]











Genes with expression patterns similar to gga-mir-1556

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UGT2A1 ENSGALG00000011805 2 1 - - - - - - - - - 1.000 UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus, transcript variant X3
2. ENSGALG00000021386 ENSGALG00000021386 29 1 - - - - - - - - - 1.000
3. PGR ENSGALG00000017195 2 1 - - - - - - - - - 1.000 progesterone receptor [Source:NCBI gene;Acc:396198]
4. SLC26A5 ENSGALG00000008222 3 1 - - - - - - - - - 1.000 solute carrier family 26 member 5 [Source:NCBI gene;Acc:417715]
5. FOLH1 ENSGALG00000017234 9 1 - - - - - - - - - 1.000 folate hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3788]
6. ATXN1 ENSGALG00000012709 2 1 - - - - - - - - - 1.000 ataxin 1 [Source:HGNC Symbol;Acc:HGNC:10548]
7. ENSGALG00000010883 ENSGALG00000010883 10 1 - - - - - - - - - 1.000
8. CNTNAP5 ENSGALG00000011577 2 1 - - - - - - - - - 1.000 contactin associated protein like 5 [Source:NCBI gene;Acc:424231]
9. gga-mir-1556 ENSGALG00000025512 2 1 - - - - - - - - - 1.000 gga-mir-1556 [Source:miRBase;Acc:MI0007281]
10. ENSGALG00000023012 ENSGALG00000023012 2 1 - - - - - - - - - 1.000
11. SLC22A15 ENSGALG00000015016 12 1 - - - - - - - - - 1.000 solute carrier family 22 member 15 [Source:HGNC Symbol;Acc:HGNC:20301]
12. ENSGALG00000013409 ENSGALG00000013409 4 1 - - - - - - - - - 1.000
13. ENSGALG00000008822 ENSGALG00000008822 221 0.996 - - - - - - - - - 0.996
14. ARHGAP39 ENSGALG00000001536 15 0.982 - - - - - - - - - 0.982 Rho GTPase activating protein 39, transcript variant X2
15. ENSGALG00000028367 ENSGALG00000028367 102 0.982 - - - - - - - - - 0.982
16. PALM2 ENSGALG00000015655 20 0.982 - - - - - - - - - 0.982 paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]
17. PLXND1 ENSGALG00000008473 21 0.976 - - - - - - - - - 0.976 plexin D1 [Source:HGNC Symbol;Acc:HGNC:9107]
18. DPY19L4 ENSGALG00000039222 30 0.97 - - - - - - - - - 0.970 dpy-19 like 4 [Source:HGNC Symbol;Acc:HGNC:27829]
19. LRRC31 ENSGALG00000023616 55 0.964 - - - - - - - - - 0.964 leucine rich repeat containing 31 [Source:HGNC Symbol;Acc:HGNC:26261]
20. IRF8 ENSGALG00000005757 5 0.962 - - - - - - - - - 0.962 interferon regulatory factor 8 [Source:NCBI gene;Acc:396385]
21. ENSGALG00000027568 ENSGALG00000027568 3 0.962 - - - - - - - - - 0.962
22. COL11A1 ENSGALG00000005180 244 0.957 - - - - - - - - - 0.957 collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
23. RAB3GAP2 ENSGALG00000009503 36 0.957 - - - - - - - - - 0.957 RAB3 GTPase activating non-catalytic protein subunit 2 [Source:NCBI gene;Acc:421343]
24. CXCL13L2 ENSGALG00000010338 370 0.954 - - - - - - - - - 0.954 C-X-C motif chemokine ligand 13-like 2 [Source:NCBI gene;Acc:422510]
25. C1orf116 ENSGALG00000001091 34 0.946 - - - - - - - - - 0.946 chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:HGNC:28667]
26. KCNJ15 ENSGALG00000016055 66 0.945 - - - - - - - - - 0.945 potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
27. CLDN20 ENSGALG00000027634 25 0.938 - - - - - - - - - 0.938 claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
28. S100A9 ENSGALG00000024272 103 0.937 - - - - - - - - - 0.937 S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
29. SAMD3 ENSGALG00000032409 459 0.933 - - - - - - - - - 0.933 sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
30. PDE8B ENSGALG00000004339 2 0.929 - - - - - - - - - 0.929 phosphodiesterase 8B, transcript variant X3
31. MOV10 ENSGALG00000001558 244 0.926 - - - - - - - - - 0.926 Mov10 RISC complex RNA helicase [Source:NCBI gene;Acc:419872]
32. OSBPL10 45 0.918 - - - - - - - - - 0.918 oxysterol binding protein like 10
33. GMDS 284 0.91 - - - - - - - - - 0.910 GDP-mannose 4,6-dehydratase, transcript variant X3
34. IYD ENSGALG00000012392 315 0.904 - - - - - - - - - 0.904 iodotyrosine deiodinase [Source:HGNC Symbol;Acc:HGNC:21071]
35. DCLRE1B ENSGALG00000028626 48 0.903 - - - - - - - - - 0.903 DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
36. ADAMTSL3 ENSGALG00000006104 57 0.902 - - - - - - - - - 0.902 ADAMTS like 3 [Source:HGNC Symbol;Acc:HGNC:14633]
37. RIMBP2 ENSGALG00000002579 10 0.895 - - - - - - - - - 0.895 RIMS binding protein 2 [Source:NCBI gene;Acc:374105]
38. OSF-2 OSF-2 10433 0.893 - - - - - - - - - 0.893
39. BCMO1 BCMO1 35 0.889 - - - - - - - - - 0.889
40. SAMD15 ENSGALG00000010457 69 0.888 - - - - - - - - - 0.888 sterile alpha motif domain containing 15
41. ZHX2 ENSGALG00000043827 13 0.887 - - - - - - - - - 0.887 zinc fingers and homeoboxes 2 [Source:HGNC Symbol;Acc:HGNC:18513]
42. LAPTM5 ENSGALG00000038636 18 0.884 - - - - - - - - - 0.884 lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
43. ARHGAP26 ENSGALG00000033938 31 0.88 - - - - - - - - - 0.880 Rho GTPase activating protein 26 [Source:NCBI gene;Acc:396113]
44. ZSWIM6 ENSGALG00000014734 7 0.88 - - - - - - - - - 0.880 zinc finger SWIM-type containing 6, transcript variant X2
45. TRPC3 ENSGALG00000011875 9 0.878 - - - - - - - - - 0.878 transient receptor potential cation channel subfamily C member 3 [Source:NCBI gene;Acc:374153]
46. GPR61 ENSGALG00000040168 70 0.878 - - - - - - - - - 0.878 G protein-coupled receptor 61 [Source:HGNC Symbol;Acc:HGNC:13300]
47. VWA3A 6 0.876 - - - - - - - - - 0.876 von Willebrand factor A domain containing 3A, transcript variant X4
48. HECTD2 ENSGALG00000038043 177 0.872 - - - - - - - - - 0.872 HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
49. ENSGALG00000011799 ENSGALG00000011799 37 0.872 - - - - - - - - - 0.872
50. RFX7 ENSGALG00000041896 69 0.871 - - - - - - - - - 0.871 regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
51. AMOTL1 ENSGALG00000017208 5 0.868 - - - - - - - - - 0.868 angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
52. STXBP5 ENSGALG00000012336 20 0.866 - - - - - - - - - 0.866 syntaxin binding protein 5 [Source:HGNC Symbol;Acc:HGNC:19665]
53. LEPRE1 LEPRE1 156 0.862 - - - - - - - - - 0.862
54. PTPRD ENSGALG00000015058 37 0.861 - - - - - - - - - 0.861 protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
55. SLC29A4 ENSGALG00000010497 43 0.858 - - - - - - - - - 0.858 solute carrier family 29 member 4 [Source:HGNC Symbol;Acc:HGNC:23097]
56. CCDC157 ENSGALG00000007907 10 0.854 - - - - - - - - - 0.854 coiled-coil domain containing 157 [Source:HGNC Symbol;Acc:HGNC:33854]
57. SOCS1 ENSGALG00000007158 14 0.844 - - - - - - - - - 0.844 suppressor of cytokine signaling 1 [Source:NCBI gene;Acc:416630]
58. ARHGEF5 ENSGALG00000017276 32 0.842 - - - - - - - - - 0.842 Rho guanine nucleotide exchange factor 5, transcript variant X5
59. MATN4 ENSGALG00000004028 15 0.842 - - - - - - - - - 0.842 matrilin 4 [Source:HGNC Symbol;Acc:HGNC:6910]
60. DCP1A 22 0.835 - - - - - - - - - 0.835 decapping mRNA 1A, transcript variant X3
61. FHOD3 ENSGALG00000013124 195 0.835 - - - - - - - - - 0.835 formin homology 2 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26178]
62. CCPG1 ENSGALG00000004387 205 0.834 - - - - - - - - - 0.834 dyslexia susceptibility 1 candidate 1 [Source:NCBI gene;Acc:415409]
63. SHROOM3 35 0.832 - - - - - - - - - 0.832 shroom family member 3, transcript variant X1
64. UGT8L ENSGALG00000005599 93 0.831 - - - - - - - - - 0.831 UDP glycosyltransferase 8-like
65. TNFSF10 ENSGALG00000009179 226 0.83 - - - - - - - - - 0.830 tumor necrosis factor superfamily member 10 [Source:NCBI gene;Acc:378894]
66. ENSGALG00000025953 ENSGALG00000025953 65 0.829 - - - - - - - - - 0.829
67. GPRC5B ENSGALG00000002028 28 0.827 - - - - - - - - - 0.827 G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
68. RALGAPA2 240 0.826 - - - - - - - - - 0.826 Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
69. RAB38 ENSGALG00000028018 1046 0.825 - - - - - - - - - 0.825 RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
70. H2B-I H2B-I 13 0.825 - - - - - - - - - 0.825
71. RBM46 ENSGALG00000009278 98 0.824 - - - - - - - - - 0.824 RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
72. POMGNT2 ENSGALG00000011518 36 0.814 - - - - - - - - - 0.814 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
73. RREB1 ENSGALG00000012799 125 0.814 - - - - - - - - - 0.814 ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
74. ENSGALG00000007080 ENSGALG00000007080 20 0.81 - - - - - - - - - 0.810
75. T ENSGALG00000011489 2619 0.808 - - - - - - - - - 0.808 T brachyury transcription factor [Source:NCBI gene;Acc:395782]
76. USP31 ENSGALG00000006286 28 0.807 - - - - - - - - - 0.807 ubiquitin specific peptidase 31 [Source:HGNC Symbol;Acc:HGNC:20060]
77. AFF1 ENSGALG00000043935 34 0.805 - - - - - - - - - 0.805 AF4/FMR2 family member 1 [Source:HGNC Symbol;Acc:HGNC:7135]
78. FGB ENSGALG00000009262 1169 0.799 - - - - - - - - - 0.799 fibrinogen beta chain [Source:NCBI gene;Acc:373926]
79. SYNPO2L ENSGALG00000005207 60 0.793 - - - - - - - - - 0.793 synaptopodin 2 like [Source:HGNC Symbol;Acc:HGNC:23532]
80. BLK ENSGALG00000016661 68 0.792 - - - - - - - - - 0.792 BLK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:1057]
81. INSIG1 ENSGALG00000017394 693 0.792 - - - - - - - - - 0.792 insulin induced gene 1 [Source:NCBI gene;Acc:420442]
82. BAFF BAFF 40 0.791 - - - - - - - - - 0.791
83. ITGA4 ENSGALG00000041577 109 0.789 - - - - - - - - - 0.789 integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]
84. BDH1 ENSGALG00000023601 8466 0.789 - - - - - - - - - 0.789 3-hydroxybutyrate dehydrogenase, type 1
85. TMEM230 ENSGALG00000036876 55 0.789 - - - - - - - - - 0.789 transmembrane protein 230 [Source:NCBI gene;Acc:419518]
86. TYRO3 ENSGALG00000008631 23 0.784 - - - - - - - - - 0.784 TYRO3 protein tyrosine kinase [Source:NCBI gene;Acc:395336]
87. ENSGALG00000028652 ENSGALG00000028652 65 0.781 - - - - - - - - - 0.781
88. ENSGALG00000005433 ENSGALG00000005433 55 0.781 - - - - - - - - - 0.781
89. KIAA0232 ENSGALG00000015538 717 0.78 - - - - - - - - - 0.780 KIAA0232 [Source:HGNC Symbol;Acc:HGNC:28992]
90. SHH ENSGALG00000006379 1943 0.78 - - - - - - - - - 0.780 sonic hedgehog [Source:NCBI gene;Acc:395615]
91. TXNRD1 ENSGALG00000035345 4784 0.779 - - - - - - - - - 0.779 Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
92. MAP3K2 42 0.778 - - - - - - - - - 0.778 mitogen-activated protein kinase kinase kinase 2, transcript variant X3
93. CYP26A1 ENSGALG00000033695 2646 0.777 - - - - - - - - - 0.777 cytochrome P450 family 26 subfamily A member 1 [Source:NCBI gene;Acc:408183]
94. SST ENSGALG00000007361 1383 0.775 - - - - - - - - - 0.775 somatostatin [Source:NCBI gene;Acc:396279]
95. ERC2 ENSGALG00000005419 24 0.774 - - - - - - - - - 0.774 ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]
96. MYO1C ENSGALG00000002709 57 0.767 - - - - - - - - - 0.767 myosin IC [Source:NCBI gene;Acc:417555]
97. RAB31 ENSGALG00000022874 418 0.765 - - - - - - - - - 0.765 RAB31, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9771]
98. MEGF10 ENSGALG00000014699 248 0.758 - - - - - - - - - 0.758 multiple EGF like domains 10 [Source:HGNC Symbol;Acc:HGNC:29634]
99. ENSGALG00000019053 ENSGALG00000019053 8 0.755 - - - - - - - - - 0.755
100. CRBN ENSGALG00000008274 27 0.752 - - - - - - - - - 0.752 cereblon [Source:HGNC Symbol;Acc:HGNC:30185]

There are 32 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA