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Results for gga-mir-125b

Gene Name Gene ID Reads Annotation
gga-mir-125b gga-mir-125b 146











Genes with expression patterns similar to gga-mir-125b

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-125b gga-mir-125b 146 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ENSGALG00000026422 ENSGALG00000026422 34 1.613 - - 0.708 - - - - 0.905 - -
3. ARFGEF1 ENSGALG00000034610 238 1.601 - - - - 0.716 - - 0.885 - - ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]
4. ZHX1 ENSGALG00000034999 21 0.998 - - - - - - - 0.998 - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
5. AGO2 ENSGALG00000040957 25 0.998 - - - - - - - 0.998 - - argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
6. EHF ENSGALG00000007817 11 0.998 - - - - - - - 0.998 - - ETS homologous factor [Source:NCBI gene;Acc:425791]
7. FAM167B ENSGALG00000003301 11 0.998 - - - - - - - 0.998 - - family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133]
8. TTLL7 ENSGALG00000008850 49 0.998 - - - - - - - 0.998 - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
9. IL6 ENSGALG00000010915 8 0.998 - - - - - - - 0.998 - - interleukin 6 [Source:NCBI gene;Acc:395337]
10. uc uc 37 0.998 - - - - - - - 0.998 - -
11. IL15RA ENSGALG00000008153 3 0.998 - - - - - - - 0.998 - - interleukin 15 receptor, alpha, transcript variant X2
12. DCBLD1 ENSGALG00000014907 19 0.998 - - - - - - - 0.998 - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
13. DUS4L ENSGALG00000023661 29 0.998 - - - - - - - 0.998 - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
14. CCDC28B ENSGALG00000003241 459 0.997 - - - - - - - 0.997 - - coiled-coil domain containing 28B [Source:NCBI gene;Acc:419647]
15. ANO3 ENSGALG00000013311 16 0.991 - - - - - - - 0.991 - - anoctamin 3 [Source:NCBI gene;Acc:422968]
16. SLC16A4 ENSGALG00000000417 168 0.991 - - - - - - - 0.991 - - solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]
17. MAPK8 ENSGALG00000006109 51 0.986 - - - - - - - 0.986 - - mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]
18. ARL16 49 0.982 - - - - - - - 0.982 - - ADP ribosylation factor like GTPase 16, transcript variant X1
19. DNAH9 ENSGALG00000001111 28 0.976 - - - 0.976 - - - - - - dynein axonemal heavy chain 9
20. TTBK1 ENSGALG00000008627 8 0.976 - - - 0.976 - - - - - - tau tubulin kinase 1 [Source:NCBI gene;Acc:416713]
21. GPR87 ENSGALG00000010377 3 0.976 - - - 0.976 - - - - - - G protein-coupled receptor 87 [Source:HGNC Symbol;Acc:HGNC:4538]
22. FES ENSGALG00000008340 223 0.976 - - - 0.976 - - - - - - FES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]
23. TMEM71 ENSGALG00000044996 4 0.976 - - - 0.976 - - - - - - transmembrane protein 71 [Source:HGNC Symbol;Acc:HGNC:26572]
24. CELSR3 ENSGALG00000036763 4 0.976 - - - 0.976 - - - - - - cadherin EGF LAG seven-pass G-type receptor 3 [Source:HGNC Symbol;Acc:HGNC:3230]
25. C3orf17 C3orf17 3 0.976 - - - 0.976 - - - - - -
26. ZBBX ENSGALG00000028207 59 0.97 - - - - - - - 0.970 - - zinc finger B-box domain containing, transcript variant X5
27. MSL2 ENSGALG00000039294 55 0.966 - - - - - - - 0.966 - - MSL complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25544]
28. UBE2O ENSGALG00000001971 77 0.962 - - - - - - - 0.962 - - ubiquitin conjugating enzyme E2 O [Source:HGNC Symbol;Acc:HGNC:29554]
29. ENSGALG00000020578 ENSGALG00000020578 25 0.962 - - - - - - - 0.962 - -
30. LEO1 ENSGALG00000004696 111 0.96 - - - - - - - 0.960 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
31. PQLC3 ENSGALG00000016449 39 0.957 - - - - - - - 0.957 - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
32. LCA5 ENSGALG00000015878 160 0.954 - - - - - - - 0.954 - - LCA5, lebercilin [Source:HGNC Symbol;Acc:HGNC:31923]
33. SIK2 ENSGALG00000036873 7 0.954 - - - - - - - 0.954 - - salt inducible kinase 2 [Source:HGNC Symbol;Acc:HGNC:21680]
34. SNORD2 SNORD2 51 0.948 - - - - - - - 0.948 - -
35. ASTN1 ENSGALG00000004472 855 0.94 - - - - - - - 0.940 - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
36. SLC35A3 12 0.939 - - - 0.939 - - - - - - solute carrier family 35 member A3, transcript variant X7
37. SFMBT2 ENSGALG00000009279 125 0.934 - - - - - - - 0.934 - - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
38. DGKE ENSGALG00000003131 17 0.918 - - - - - - - 0.918 - - diacylglycerol kinase epsilon [Source:HGNC Symbol;Acc:HGNC:2852]
39. DUSP11 DUSP11 765 0.915 - - - - - - - 0.915 - -
40. PARP8 ENSGALG00000032991 17 0.914 - - - - - - - 0.914 - - poly(ADP-ribose) polymerase family member 8 [Source:HGNC Symbol;Acc:HGNC:26124]
41. CFTR ENSGALG00000032986 424 0.911 - - - - - - - 0.911 - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
42. TRAF3IP2 ENSGALG00000015026 26 0.905 - - - - - - - 0.905 - - TRAF3 interacting protein 2, transcript variant X1
43. AZI2 ENSGALG00000011428 24 0.898 - - - - - - - 0.898 - - 5-azacytidine induced 2 [Source:HGNC Symbol;Acc:HGNC:24002]
44. CCDC171 ENSGALG00000015103 349 0.896 - - - - - - - 0.896 - - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
45. MGAT4C ENSGALG00000000225, ENSGALG00000028360 358 0.895 - - - 0.895 - - - - - - MGAT4 family member C [Source:HGNC Symbol;Acc:HGNC:30871]
46. VEGFRKDRL ENSGALG00000007646 18 0.894 - - - 0.894 - - - - - - vascular endothelial growth factor receptor kdr-like, transcript variant X2
47. SNCG1 SNCG1 56 0.89 - - - - - - - 0.890 - -
48. CCDC71 ENSGALG00000006787 48 0.889 - - - - - - - 0.889 - - coiled-coil domain containing 71 [Source:HGNC Symbol;Acc:HGNC:25760]
49. CCDC178 6 0.887 - - - 0.887 - - - - - - coiled-coil domain containing 178, transcript variant X3
50. MXRA7 ENSGALG00000001805 945 0.886 - - - - - - - 0.886 - - matrix remodeling associated 7 [Source:HGNC Symbol;Acc:HGNC:7541]
51. PITPNM2 ENSGALG00000003645 17 0.882 - - - 0.882 - - - - - - phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
52. RAB40B ENSGALG00000001545 8 0.877 - - - 0.877 - - - - - - RAB40B, member RAS oncogene family [Source:NCBI gene;Acc:417338]
53. NEFM ENSGALG00000000317 6992 0.876 - - - - - - - 0.876 - - neurofilament medium [Source:NCBI gene;Acc:396206]
54. FIP1L1 ENSGALG00000013943 15 0.875 - - - - - - - 0.875 - - factor interacting with PAPOLA and CPSF1, transcript variant X5
55. CCDC84 ENSGALG00000007689 18 0.875 - - - - - - - 0.875 - - coiled-coil domain containing 84 [Source:HGNC Symbol;Acc:HGNC:30460]
56. CCDC157 ENSGALG00000007907 10 0.874 - - - 0.874 - - - - - - coiled-coil domain containing 157 [Source:HGNC Symbol;Acc:HGNC:33854]
57. MCMBP ENSGALG00000009455 90 0.868 - - - - - - - 0.868 - - minichromosome maintenance complex binding protein [Source:NCBI gene;Acc:423933]
58. TJP3 ENSGALG00000000748 45 0.868 - - - - - - - 0.868 - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
59. KLHL42 ENSGALG00000017296 62 0.867 - - - - - - - 0.867 - - kelch like family member 42 [Source:HGNC Symbol;Acc:HGNC:29252]
60. ELMOD2 ENSGALG00000009836 177 0.861 - - - - - - - 0.861 - - ELMO domain containing 2 [Source:NCBI gene;Acc:422449]
61. KIAA1244 KIAA1244 62 0.86 - - - - - - - 0.860 - -
62. PBLD ENSGALG00000003935 105 0.857 - - - - - - - 0.857 - - phenazine biosynthesis like protein domain containing [Source:NCBI gene;Acc:423685]
63. CERS6 ENSGALG00000010902 14 0.855 - - - 0.855 - - - - - - ceramide synthase 6 [Source:HGNC Symbol;Acc:HGNC:23826]
64. PDLIM3 ENSGALG00000013414 52 0.853 - - - - - - - 0.853 - - PDZ and LIM domain 3 [Source:NCBI gene;Acc:414873]
65. OSBPL6 ENSGALG00000009172 96 0.852 - - - 0.852 - - - - - - oxysterol binding protein like 6 [Source:HGNC Symbol;Acc:HGNC:16388]
66. REV-ERBB REV-ERBB 331 0.85 - - - - 0.850 - - - - -
67. TEX11 ENSGALG00000005775 58 0.85 - - - 0.850 - - - - - - testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]
68. CAT-1 CAT-1 115 0.842 - - - 0.842 - - - - - -
69. TRERF1 ENSGALG00000009896 42 0.841 - - - 0.841 - - - - - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
70. GPR146 ENSGALG00000004058 302 0.839 - - - - 0.839 - - - - - G protein-coupled receptor 146 [Source:NCBI gene;Acc:416456]
71. RND2 ENSGALG00000002804 9 0.837 - - - - - - - 0.837 - - Rho family GTPase 2 [Source:NCBI gene;Acc:428307]
72. ARV1 ENSGALG00000011155 38 0.833 - - - 0.833 - - - - - - ARV1 homolog, fatty acid homeostasis modulator [Source:HGNC Symbol;Acc:HGNC:29561]
73. EXOC1 ENSGALG00000013778 93 0.833 - - - - - - - 0.833 - - exocyst complex component 1 [Source:HGNC Symbol;Acc:HGNC:30380]
74. GABRP ENSGALG00000002152 17 0.833 - - - 0.833 - - - - - - gamma-aminobutyric acid type A receptor pi subunit [Source:HGNC Symbol;Acc:HGNC:4089]
75. RASA1 ENSGALG00000017706 224 0.832 - - - - - - - 0.832 - - RAS p21 protein activator 1
76. PLK3 ENSGALG00000010129 933 0.831 - - - - - - - 0.831 - - polo like kinase 3 [Source:HGNC Symbol;Acc:HGNC:2154]
77. INADL INADL 51 0.831 - - - - - - - 0.831 - -
78. NPY ENSGALG00000010983 441 0.829 - - - - - - - 0.829 - - neuropeptide Y [Source:NCBI gene;Acc:396464]
79. TSPAN2 ENSGALG00000002554 32 0.825 - - - - - - - 0.825 - - tetraspanin 2 [Source:HGNC Symbol;Acc:HGNC:20659]
80. C11orf63 93 0.821 - - - 0.821 - - - - - - chromosome 11 open reading frame 63, transcript variant X2
81. MBTD1 ENSGALG00000002954 254 0.82 - - - 0.820 - - - - - - mbt domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19866]
82. TNRC6B ENSGALG00000012050 613 0.815 - - - - - - - 0.815 - - trinucleotide repeat containing 6B, transcript variant X10
83. PROCR ENSGALG00000006547 645 0.815 - - - - - - - 0.815 - - protein C receptor [Source:NCBI gene;Acc:424867]
84. SLITRK4 ENSGALG00000007242 165 0.811 - - - - - - - 0.811 - - SLIT and NTRK like family member 4 [Source:HGNC Symbol;Acc:HGNC:23502]
85. RGS10 ENSGALG00000009422 10 0.809 - - - - - - - 0.809 - - regulator of G protein signaling 10 [Source:HGNC Symbol;Acc:HGNC:9992]
86. TMEM80 ENSGALG00000045337 775 0.809 - - - - - - - 0.809 - - transmembrane protein 80 [Source:HGNC Symbol;Acc:HGNC:27453]
87. GABARAPL3 GABARAPL3 32 0.809 - - - 0.809 - - - - - -
88. FBP2 ENSGALG00000012612 17 0.807 - - - 0.807 - - - - - - fructose-bisphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3607]
89. PTK2B ENSGALG00000016564 406 0.807 - - - 0.807 - - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
90. NCAPD3 ENSGALG00000001491 221 0.801 - - - - - - - 0.801 - - non-SMC condensin II complex subunit D3, transcript variant X3
91. DDI2 115 0.801 - - - - - - - 0.801 - - DNA damage inducible 1 homolog 2, transcript variant X2
92. C1H13ORF27 C1H13ORF27 635 0.8 - - - - - - - 0.800 - -
93. FANCI ENSGALG00000006658 908 0.8 - - - - - - - 0.800 - - Fanconi anemia complementation group I [Source:NCBI gene;Acc:415491]
94. CDH6 ENSGALG00000012917 17 0.797 - - - - 0.797 - - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
95. BTBD19 ENSGALG00000028978 20 0.797 - - - - 0.797 - - - - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
96. ST8SIA1 ENSGALG00000013211 14 0.797 - - - - 0.797 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
97. ENSGALG00000015097 ENSGALG00000015097 93 0.797 - - - - 0.797 - - - - -
98. ZFPM2 ENSGALG00000040079 942 0.796 - - - - - - - 0.796 - - zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
99. UBXN7 ENSGALG00000006385 28 0.795 - - - - - - - 0.795 - - UBX domain protein 7 [Source:HGNC Symbol;Acc:HGNC:29119]
100. SLC22A18 ENSGALG00000006454 24 0.791 - - - 0.791 - - - - - - solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]

There are 91 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA