Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-10b

Gene Name Gene ID Reads Annotation
gga-mir-10b ENSGALG00000018331 147 gga-mir-10b [Source:miRBase;Acc:MI0001216]











Genes with expression patterns similar to gga-mir-10b

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-10b ENSGALG00000018331 147 7 - 1.000 1.000 1.000 1.000 1.000 1.000 - - 1.000 gga-mir-10b [Source:miRBase;Acc:MI0001216]
2. KCNU1 ENSGALG00000045668 2 1 - - - 1.000 - - - - - - potassium calcium-activated channel subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:18867]
3. HOXA9 ENSGALG00000028983 9298 1 - - - 1.000 - - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
4. DISP2 ENSGALG00000031266 5 1 - - - 1.000 - - - - - - dispatched RND transporter family member 2 [Source:HGNC Symbol;Acc:HGNC:19712]
5. C1orf228 3 1 - - - 1.000 - - - - - - chromosome 1 open reading frame 228, transcript variant X5
6. ENSGALG00000025865 ENSGALG00000025865 1 1 - - - 1.000 - - - - - -
7. ENSGALG00000026580 ENSGALG00000026580 4 1 - - - 1.000 - - - - - -
8. ENSGALG00000010883 ENSGALG00000010883 10 1 - - - 1.000 - - - - - -
9. DM5L ENSGALG00000003022 1 1 - - - 1.000 - - - - - - dimethylaniline monooxygenase [N-oxide-forming] 5-like
10. DCDC2B ENSGALG00000046649 3 1 - - - 1.000 - - - - - - doublecortin domain containing 2B [Source:HGNC Symbol;Acc:HGNC:32576]
11. snosnR60 snosnR60 3 1 - - - 1.000 - - - - - -
12. ENSGALG00000007498 ENSGALG00000007498 2 1 - - - 1.000 - - - - - -
13. ENSGALG00000022901 ENSGALG00000022901 19 0.97 - - - 0.970 - - - - - -
14. TFRC 31 0.968 - - - 0.968 - - - - - - transferrin receptor, transcript variant X1
15. MOG ENSGALG00000022875 9 0.961 - - - 0.961 - - - - - - myelin oligodendrocyte glycoprotein, transcript variant X50
16. TAL2 ENSGALG00000023114 17 0.927 - - - 0.927 - - - - - - TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]
17. DSC1 ENSGALG00000015140 16 0.898 - - - 0.898 - - - - - - desmocollin 1, transcript variant X1
18. ENSGALG00000022967 ENSGALG00000022967 240 0.863 - - 0.863 - - - - - - -
19. ENSGALG00000026666 ENSGALG00000026666 78 0.851 - - - - - - 0.851 - - -
20. HYAL2 ENSGALG00000002138 237 0.851 - - - - - - 0.851 - - - hyaluronoglucosaminidase 2 [Source:HGNC Symbol;Acc:HGNC:5321]
21. STXBP5L ENSGALG00000032361 41 0.851 - - - - - - 0.851 - - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
22. STARD13 ENSGALG00000017065 18 0.851 - - - - - - 0.851 - - - StAR related lipid transfer domain containing 13, transcript variant X3
23. PIKFYVE ENSGALG00000008842 3 0.851 - - - - - - 0.851 - - - phosphoinositide kinase, FYVE-type zinc finger containing [Source:HGNC Symbol;Acc:HGNC:23785]
24. SNORD95 SNORD95 6 0.851 - - - - - - 0.851 - - -
25. GPC6 ENSGALG00000016900 13 0.851 - - - - - - 0.851 - - - glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
26. SOX30 ENSGALG00000045860 5 0.851 - - - - - - 0.851 - - - SRY-box 30 [Source:HGNC Symbol;Acc:HGNC:30635]
27. PDXK ENSGALG00000016205 26 0.851 - - - - - - 0.851 - - - pyridoxal kinase [Source:NCBI gene;Acc:418549]
28. ENSGALG00000027175 ENSGALG00000027175 3 0.851 - - - - - - 0.851 - - -
29. CCDC28B ENSGALG00000003241 459 0.851 - - - - - - 0.851 - - - coiled-coil domain containing 28B [Source:NCBI gene;Acc:419647]
30. AGAP1 ENSGALG00000004045 47 0.851 - - - - - - 0.851 - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:16922]
31. ENDOD1 ENSGALG00000017205 3 0.851 - - - - - - 0.851 - - - endonuclease domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29129]
32. ENSGALG00000026032 ENSGALG00000026032 1 0.851 - - - - - - 0.851 - - -
33. CD3D ENSGALG00000007418 314 0.851 - - - - - - 0.851 - - - CD3d molecule [Source:NCBI gene;Acc:396518]
34. ENSGALG00000023852 ENSGALG00000023852 31 0.851 - - - - - - 0.851 - - -
35. GAK ENSGALG00000015352 99 0.851 - - - - - - 0.851 - - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
36. GIT1 ENSGALG00000023703 174 0.851 - - - - - - 0.851 - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:NCBI gene;Acc:417584]
37. PQLC3 ENSGALG00000016449 39 0.851 - - - - - - 0.851 - - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
38. BSX ENSGALG00000006515 1 0.851 - - - - - - 0.851 - - - brain specific homeobox [Source:NCBI gene;Acc:395183]
39. CCNT2 ENSGALG00000012207 14 0.851 - - - - - - 0.851 - - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
40. GTSF1 ENSGALG00000001109 15 0.851 - - - - - - 0.851 - - - gametocyte specific factor 1 [Source:HGNC Symbol;Acc:HGNC:26565]
41. ENSGALG00000023424 ENSGALG00000023424 1 0.851 - - - - - - 0.851 - - -
42. ASS1 ENSGALG00000023689 327 0.851 - - - - - - 0.851 - - - argininosuccinate synthase 1 [Source:NCBI gene;Acc:417185]
43. ENSGALG00000020819 ENSGALG00000020819 2 0.851 - - - - - - 0.851 - - -
44. PTH ENSGALG00000042878 40 0.843 - - - 0.843 - - - - - - parathyroid hormone [Source:NCBI gene;Acc:396436]
45. NRAP ENSGALG00000008914 24 0.843 - - - 0.843 - - - - - - nebulin related anchoring protein [Source:HGNC Symbol;Acc:HGNC:7988]
46. SGCG ENSGALG00000017122 13 0.84 - - - 0.840 - - - - - - sarcoglycan gamma [Source:HGNC Symbol;Acc:HGNC:10809]
47. MIP-3ALPHA MIP-3ALPHA 14 0.837 - - - - 0.837 - - - - -
48. PTPRZ1 ENSGALG00000040114 3410 0.833 - - 0.833 - - - - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
49. PLAC8 PLAC8 20 0.83 - - - - 0.830 - - - - -
50. gga-mir-6659 ENSGALG00000028216 6 0.83 - - - - 0.830 - - - - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
51. TRPV2 ENSGALG00000004519 7 0.83 - - - - 0.830 - - - - - transient receptor potential cation channel subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:18082]
52. CCDC84 ENSGALG00000007689 18 0.83 - - - - 0.830 - - - - - coiled-coil domain containing 84 [Source:HGNC Symbol;Acc:HGNC:30460]
53. ENSGALG00000027164 ENSGALG00000027164 8 0.83 - - - - 0.830 - - - - -
54. PKDREJ 3 0.83 - - - - 0.830 - - - - - polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)
55. KCNJ3 ENSGALG00000012537 6 0.83 - - - - 0.830 - - - - - potassium voltage-gated channel subfamily J member 3 [Source:NCBI gene;Acc:396369]
56. GLDC ENSGALG00000015053 103 0.83 - - - - 0.830 - - - - - glycine decarboxylase [Source:NCBI gene;Acc:374222]
57. CREB3 ENSGALG00000002523 23 0.83 - - - 0.830 - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
58. TAF5L ENSGALG00000011098 17 0.83 - - - - 0.830 - - - - - TATA-box binding protein associated factor 5 like [Source:HGNC Symbol;Acc:HGNC:17304]
59. DPP10 ENSGALG00000012156 20 0.83 - - - - 0.830 - - - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
60. ABCA9 ENSGALG00000021395 5 0.83 - - - - 0.830 - - - - - ATP binding cassette subfamily A member 9
61. MFN2 ENSGALG00000004523 10 0.816 - - - 0.816 - - - - - - mitofusin 2 [Source:HGNC Symbol;Acc:HGNC:16877]
62. PSD ENSGALG00000042551 6 0.816 - - - 0.816 - - - - - - pleckstrin and Sec7 domain containing [Source:HGNC Symbol;Acc:HGNC:9507]
63. ENSGALG00000003611 ENSGALG00000003611 22 0.816 - - - 0.816 - - - - - -
64. HES5 ENSGALG00000001141 6514 0.814 - - 0.814 - - - - - - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
65. ZIC1 ENSGALG00000040532 6543 0.804 - - 0.804 - - - - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
66. PAX3 ENSGALG00000030944 2987 0.802 - - 0.802 - - - - - - - paired box 3 [Source:NCBI gene;Acc:374127]
67. OPTC ENSGALG00000003554 3698 0.801 - - 0.801 - - - - - - - opticin [Source:NCBI gene;Acc:395130]
68. EML5 ENSGALG00000010639 25 0.797 - - - 0.797 - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
69. ATP11A ENSGALG00000041644 74 0.795 - - - - - - 0.795 - - - ATPase phospholipid transporting 11A [Source:HGNC Symbol;Acc:HGNC:13552]
70. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 0.789 - - - - 0.789 - - - - - family with sequence similarity 214 member B, transcript variant X14
71. DENND5B 4077 0.788 - - 0.788 - - - - - - - DENN domain containing 5B, transcript variant X1
72. DRAXIN ENSGALG00000004631 3122 0.787 - - 0.787 - - - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
73. BCMO1 BCMO1 35 0.786 - - - - 0.786 - - - - -
74. OXCT1 ENSGALG00000014846 17 0.785 - - - - 0.785 - - - - - 3-oxoacid CoA-transferase 1 [Source:NCBI gene;Acc:427190]
75. RNF19A ENSGALG00000038772 380 0.785 - - - 0.785 - - - - - - ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
76. CYTIP ENSGALG00000012545 25 0.783 - - - 0.783 - - - - - - cytohesin 1 interacting protein [Source:HGNC Symbol;Acc:HGNC:9506]
77. ENSGALG00000018479 ENSGALG00000018479 10 0.783 - - - 0.783 - - - - - -
78. ENSGALG00000026584 ENSGALG00000026584 77 0.78 - - 0.780 - - - - - - -
79. TNFSF11 ENSGALG00000026163 26 0.779 - - - - 0.779 - - - - - TNF superfamily member 11 [Source:NCBI gene;Acc:428067]
80. Mar-01 Mar-01 3 0.775 - - - - 0.775 - - - - -
81. NPAS3 ENSGALG00000029022 1950 0.769 - - 0.769 - - - - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
82. DHX58 ENSGALG00000023821 15 0.768 - - 0.768 - - - - - - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
83. KIAA1549L ENSGALG00000012020 33 0.765 - - - - - - - - - 0.765 KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
84. DNAH12 ENSGALG00000005601 80 0.762 - - - - 0.762 - - - - - dynein, axonemal, heavy chain 12, transcript variant X6
85. PHF21B ENSGALG00000014218 10 0.762 - - - 0.762 - - - - - - PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
86. PRSS35 ENSGALG00000015847 52 0.758 - - 0.758 - - - - - - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
87. ERCC6L2 ENSGALG00000012621 77 0.758 - - - 0.758 - - - - - - excision repair cross-complementation group 6 like 2, transcript variant X8
88. RNF19B ENSGALG00000039716 662 0.757 - - - - - - - - - 0.757 ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
89. LFNG ENSGALG00000038515 5178 0.755 - - 0.755 - - - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
90. LASP-2 LASP-2 4415 0.752 - - 0.752 - - - - - - -
91. RGS8 ENSGALG00000026263 124 0.746 - - - - 0.746 - - - - - regulator of G protein signaling 8 [Source:HGNC Symbol;Acc:HGNC:16810]
92. GNG10 ENSGALG00000015683 6905 0.746 - - 0.746 - - - - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
93. MTMR1 ENSGALG00000009085 9 0.745 - - - 0.745 - - - - - - myotubularin related protein 1 [Source:HGNC Symbol;Acc:HGNC:7449]
94. RRP12 ENSGALG00000041331 3369 0.742 - - - - - - - - - 0.742 ribosomal RNA processing 12 homolog [Source:NCBI gene;Acc:423845]
95. ENSGALG00000019568 ENSGALG00000019568 25 0.741 - - - - - - 0.741 - - -
96. WNT4 ENSGALG00000041708 1277 0.735 - - 0.735 - - - - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
97. PEAK1 ENSGALG00000002759 39 0.731 - - - - - - - - - 0.731 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
98. SCNN1B ENSGALG00000006202 87 0.73 - - - - 0.730 - - - - - sodium channel epithelial 1 beta subunit [Source:HGNC Symbol;Acc:HGNC:10600]
99. PCLO 249 0.728 - - - - - - 0.728 - - - piccolo presynaptic cytomatrix protein
100. ENSGALG00000026155 ENSGALG00000026155 49 0.727 - - - 0.727 - - - - - -

There are 32 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA