Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gfra3

Gene Name Gene ID Reads Annotation
gfra3 ENSDARG00000087704 122 GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]










Genes with expression patterns similar to gfra3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gfra3 ENSDARG00000087704 122 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
2. neurod neurod 1189 3.378 0.742 0.816 - - - 0.928 0.892 - -
3. NPPC ENSDARG00000068126 45 2.863 - 1.000 - - - 0.923 0.940 - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
4. tagln3a ENSDARG00000079805 123 2.755 0.798 1.000 - - - - 0.957 - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
5. pkd2l1 ENSDARG00000022503 372 2.651 - 0.901 - - - 0.824 0.926 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
6. MCTP1 MCTP1 219 2.49 0.751 0.881 - - - - 0.858 - -
7. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 2.308 0.768 0.759 - - - - 0.781 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
8. nkx2.2b ENSDARG00000101549 266 2.304 0.704 - - - - 0.814 0.786 - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
9. urp2 ENSDARG00000067781 85 2.269 - 0.752 - - - 0.744 0.773 - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
10. BX469915.2 BX469915.2 48 2 - 1.000 - - - - 1.000 - -
11. si:dkey-200l5.4 ENSDARG00000095294 13 1.91 - 1.000 - - - 0.910 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
12. nfixa ENSDARG00000043226 14 1.91 - 1.000 - - - 0.910 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
13. si:ch211-38m6.6 ENSDARG00000076959 12 1.907 - 1.000 - - - 0.907 - - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
14. trim46b ENSDARG00000058649 54 1.907 - 1.000 - - - 0.907 - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
15. gucy1b3 92 1.892 - 1.000 - - - - 0.892 - - guanylate cyclase 1, soluble, beta 3
16. nrsn1 ENSDARG00000111235 123 1.881 - 0.913 - - - - 0.968 - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
17. nkx2.2a ENSDARG00000053298 747 1.803 - - - - - 0.944 0.859 - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
18. INSM2 ENSDARG00000020655 122 1.801 - - - - - 0.910 0.891 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
19. olig2 ENSDARG00000040946 1405 1.796 - - - - - 0.961 0.835 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
20. syt9b ENSDARG00000029239 31 1.794 - 1.000 - - 0.794 - - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
21. lrmp ENSDARG00000045574 26 1.779 - 0.907 - - - 0.872 - - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
22. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1.779 - 1.000 - - - - 0.779 - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
23. TRPC4_1 TRPC4_1 212 1.779 - 1.000 - - - - 0.779 - -
24. ptf1a ENSDARG00000014479 349 1.779 - 1.000 - - - - 0.779 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
25. CR391967.1 CR391967.1 135 1.779 - 1.000 - - - - 0.779 - -
26. FP074874.2 ENSDARG00000105724 107 1.774 0.774 1.000 - - - - - - -
27. nkx6.1 ENSDARG00000022569 3779 1.774 - - - - - 0.945 0.829 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
28. si:ch73-265d7.2 ENSDARG00000116713 2142 1.773 - - - - - 0.908 0.865 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
29. porcn ENSDARG00000052558, ENSDARG00000111556 110 1.77 - 1.000 - - - - 0.770 - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
30. KCNAB2 KCNAB2 129 1.77 - 1.000 - - - - 0.770 - -
31. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.77 - 1.000 - - - - 0.770 - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
32. gpr98 gpr98 717 1.763 - - - - - 0.877 0.886 - -
33. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1.76 - 1.000 - - - 0.760 - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
34. SSX2IP SSX2IP 316 1.753 - - - - - 0.898 0.855 - -
35. rims3 ENSDARG00000062305 202 1.75 - 1.000 - - - - 0.750 - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]
36. cacng3b ENSDARG00000076401 91 1.738 - 1.000 - - - - 0.738 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
37. lhfpl4a ENSDARG00000111810 206 1.732 0.884 - - - - 0.848 - - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
38. neflb ENSDARG00000012426 298 1.726 0.726 1.000 - - - - - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
39. ift81 ENSDARG00000007444 97 1.726 - 0.946 - - - - 0.780 - - intraflagellar transport 81 homolog [Source:ZFIN;Acc:ZDB-GENE-040714-3]
40. CABZ01032454.1 CABZ01032454.1 7 1.722 - 0.815 - - - 0.907 - - -
41. nkx2.9 ENSDARG00000020332 357 1.7 - - - - - 0.880 0.820 - - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
42. cdkl1 ENSDARG00000017329 3345 1.699 - - - - - 0.754 0.945 - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
43. BEGAIN BEGAIN 39 1.689 - - - - - 0.910 0.779 - -
44. CELF3 CELF3 163 1.686 - 0.898 - - - 0.788 - - -
45. pbx3a ENSDARG00000089262 97 1.684 - - - - - 0.705 0.979 - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
46. gnb5b ENSDARG00000055377 98 1.674 - 0.898 - - - - 0.776 - - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
47. sst1.1 ENSDARG00000040799 677 1.672 - - - - - 0.824 0.848 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
48. WSCD1 ENSDARG00000098113 35 1.67 0.760 - - - - 0.910 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
49. lrrc4bb ENSDARG00000014792 47 1.666 - 0.889 - - - 0.777 - - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
50. ascl1a ENSDARG00000038386 1290 1.657 - - - - - 0.886 0.771 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
51. nptx1l ENSDARG00000074671 569 1.654 - 0.918 - - - - 0.736 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
52. rnft2 ENSDARG00000053019 270 1.647 - 0.822 - - - - 0.825 - - ring finger protein, transmembrane 2 [Source:ZFIN;Acc:ZDB-GENE-050522-168]
53. rap2ip rap2ip 681 1.644 - 0.907 - - - - 0.737 - -
54. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 1.637 - - - - - 0.742 0.895 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
55. mnx2a ENSDARG00000042106 939 1.634 - - - - - 0.806 0.828 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
56. eef1a1a ENSDARG00000039502 234 1.627 - 0.881 - - - 0.746 - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
57. FAM196A 82 1.622 - 0.901 - - - - 0.721 - - family with sequence similarity 196 member A
58. syt11a ENSDARG00000057913 1145 1.62 - 0.902 - - - - 0.718 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
59. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1.62 - - - - - 0.910 0.710 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
60. si:dkey-286j17.4 ENSDARG00000093402 1 1.614 - 0.704 - - - 0.910 - - - si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]
61. CDH7 16 1.611 - 0.704 - - - 0.907 - - - cadherin 7, type 2, transcript variant X1
62. her12 ENSDARG00000032963 754 1.608 0.882 - - - - - 0.726 - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
63. ksr2 ENSDARG00000094526 134 1.607 - 0.901 - - - - 0.706 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
64. ENTHD1 ENTHD1 235 1.594 - - - - - 0.889 0.705 - -
65. GADD45G_1 GADD45G_1 236 1.592 0.842 - - - - - 0.750 - -
66. ADAMTS3 ENSDARG00000060127 2839 1.59 - - - - - 0.752 0.838 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
67. zgc:113531 ENSDARG00000038794 2063 1.583 - - - - - 0.707 0.876 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
68. GLRA3 ENSDARG00000011066 242 1.579 0.765 0.814 - - - - - - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
69. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.574 - 0.704 - - - - 0.870 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
70. prdm8 ENSDARG00000025017 370 1.569 - - - - - 0.811 0.758 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
71. chrm3a ENSDARG00000071091 72 1.561 - - - - - 0.759 0.802 - - cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]
72. ptprnb ENSDARG00000077047 2743 1.56 0.719 - - - - - 0.841 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
73. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.549 0.766 0.783 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
74. hectd2 ENSDARG00000061194 559 1.548 - - - - - 0.702 0.846 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
75. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.54 - 0.788 - - - - 0.752 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
76. sox2 ENSDARG00000070913 2763 1.535 0.743 - - - - - 0.792 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
77. dacha ENSDARG00000010132 648 1.531 0.721 - - - - - 0.810 - - dachshund a [Source:ZFIN;Acc:ZDB-GENE-020402-3]
78. pdzrn4 ENSDARG00000045687 362 1.527 0.769 - - - - - 0.758 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
79. nes ENSDARG00000088805 2710 1.52 - 0.770 - - - - 0.750 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
80. ctnnd2b ENSDARG00000003779 964 1.517 0.806 - - - - - 0.711 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
81. smc1a ENSDARG00000055754 62 1.517 - - - - - 0.801 0.716 - - structural maintenance of chromosomes 1A [Source:ZFIN;Acc:ZDB-GENE-090506-9]
82. CABZ01071530.2 CABZ01071530.2 47 1.514 - 0.704 - - - 0.810 - - -
83. si:ch73-389b16.2 ENSDARG00000103802 340 1.507 0.726 - - - - - 0.781 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
84. MAP3K2 ENSDARG00000062884 34 1.505 0.726 - - - - - 0.779 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
85. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.505 - - - - - 0.728 0.777 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
86. CNTNAP3 ENSDARG00000067824 25 1.504 0.725 - - - - - 0.779 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
87. tnika ENSDARG00000056218 728 1.501 0.750 - - - - - 0.751 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
88. gpr144 gpr144 479 1.499 0.757 - - - - - 0.742 - -
89. mapk11 ENSDARG00000045836 846 1.497 0.740 - - - - - 0.757 - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
90. st18 663 1.494 0.751 - - - - - 0.743 - - suppression of tumorigenicity 18, zinc finger
91. MSMP ENSDARG00000105581 254 1.493 0.703 - - - - - 0.790 - - microseminoprotein, prostate associated [Source:HGNC Symbol;Acc:HGNC:29663]
92. lingo2 lingo2 67 1.492 - - - - - 0.780 0.712 - -
93. hn1a hn1a 115 1.465 - 0.762 - - - 0.703 - - -
94. ncana 1537 1.453 0.707 - - - - - 0.746 - - neurocan a
95. csf1b ENSDARG00000068263 248 1.438 - 0.714 - - - - 0.724 - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
96. cldn5a ENSDARG00000043716 3865 1.43 0.721 - - - - - 0.709 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
97. cldn19 ENSDARG00000044569 281 1.429 0.726 - - - - - 0.703 - - claudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
98. ldb2b ENSDARG00000034896, ENSDARG00000113987, ENSDARG00000116485 976 1.421 - - - - - 0.710 0.711 - - LIM domain binding 2b [Source:ZFIN;Acc:ZDB-GENE-990415-137]
99. cpeb1b ENSDARG00000008454 37 1 - 1.000 - - - - - - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
100. U6_23 U6_23 0 1 - 1.000 - - - - - - -

There are 1163 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA