Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gfra1b

Gene Name Gene ID Reads Annotation
gfra1b ENSDARG00000102564 821 gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]










Genes with expression patterns similar to gfra1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gfra1b ENSDARG00000102564 821 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
2. sema3c ENSDARG00000034300 881 2.591 0.867 - - - - 0.804 0.920 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
3. SLC5A7 SLC5A7 453 2.562 0.846 - - - - 0.789 0.927 - -
4. im:7162084 im:7162084 665 2.556 0.909 - - - - 0.747 0.900 - -
5. chat chat 463 2.532 0.929 - - - - 0.734 0.869 - -
6. BX511121.1 ENSDARG00000029997 1774 2.476 0.898 - - - - 0.808 0.770 - -
7. chga ENSDARG00000008829 1086 2.468 0.825 - - - - 0.716 0.927 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
8. clstn1 ENSDARG00000031720 5286 2.461 0.837 - - - - 0.724 0.900 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
9. hoxa2b ENSDARG00000023031 706 2.452 0.842 - - - - 0.734 0.876 - - homeobox A2b [Source:ZFIN;Acc:ZDB-GENE-990415-98]
10. prdm8 ENSDARG00000025017 370 2.442 0.923 - - - - 0.750 0.769 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
11. neurog1 ENSDARG00000056130 3924 2.428 0.795 - - - - 0.753 0.880 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
12. nes ENSDARG00000088805 2710 2.42 0.835 - - - - 0.717 0.868 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
13. hoxd9a ENSDARG00000059274 3414 2.39 - - - 0.756 - 0.843 0.791 - - homeobox D9a [Source:ZFIN;Acc:ZDB-GENE-990415-121]
14. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.383 0.772 - - - - 0.719 0.892 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
15. ank2b ENSDARG00000043313 3065 2.368 0.824 - - - - 0.771 0.773 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
16. CABZ01029738.1 CABZ01029738.1 327 2.352 0.730 - - - - 0.825 0.797 - -
17. EFCC1 ENSDARG00000077826 1359 2.341 0.752 - - - - 0.724 0.865 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
18. ctnnd2b ENSDARG00000003779 964 2.341 0.763 - - - - 0.734 0.844 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
19. tox ENSDARG00000032317 9126 2.339 0.737 0.737 - - - - 0.865 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
20. map7d2a ENSDARG00000068480 513 2.319 0.759 - - - - 0.707 0.853 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
21. mnx2b ENSDARG00000030350 484 2.317 0.794 - - - - 0.785 0.738 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
22. CABZ01028287.1 CABZ01028287.1 626 2.315 0.821 - - - - 0.782 0.712 - -
23. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.3 0.767 - - - - 0.737 0.796 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
24. AGO1 ENSDARG00000092644 4521 2.272 0.706 - - - - 0.736 0.830 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
25. SSX2IP SSX2IP 316 2.268 0.720 - - - - 0.763 0.785 - -
26. cacng2b ENSDARG00000102376 213 2.259 0.774 - - - - 0.770 0.715 - - calcium channel, voltage-dependent, gamma subunit 2b [Source:ZFIN;Acc:ZDB-GENE-090624-3]
27. RNF145 RNF145 1364 2.234 - 0.705 - - - 0.719 0.810 - -
28. hectd2 ENSDARG00000061194 559 2.202 0.753 - - - - 0.739 0.710 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
29. cbx1b ENSDARG00000054442 1206 2.201 0.704 - - - - 0.782 0.715 - - chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
30. fhdc1 ENSDARG00000074812 934 2.156 - - 0.718 - - 0.720 0.718 - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
31. SNAP91 ENSDARG00000098809 556 1.805 0.887 - - - - - 0.918 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
32. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.805 0.939 - - - - - 0.866 - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
33. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.792 0.891 - - - - - 0.901 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
34. CU928222.1 ENSDARG00000097436 1662 1.784 0.934 - - - - - 0.850 - -
35. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.783 0.898 - - - - - 0.885 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
36. calca ENSDARG00000056590 150 1.783 0.896 - - - - - 0.887 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
37. nkx6.2 ENSDARG00000104735 5081 1.78 0.890 - - - - - 0.890 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
38. slc18a3a ENSDARG00000006356 1285 1.773 0.870 - - - - - 0.903 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
39. chd7 ENSDARG00000075211 12085 1.764 - - - - - 0.881 0.883 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
40. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.763 0.855 - - - - - 0.908 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
41. pdzrn4 ENSDARG00000045687 362 1.753 0.922 - - - - - 0.831 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
42. si:ch211-247j9.1 ENSDARG00000079283 217 1.745 0.886 - - - - - 0.859 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
43. si:ch73-21g5.7 ENSDARG00000093156 9412 1.735 0.848 - - - - - 0.887 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
44. nrarpb ENSDARG00000018958 6225 1.732 0.853 - - - - - 0.879 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
45. dla ENSDARG00000010791 9281 1.73 0.853 - - - - - 0.877 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
46. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.727 - - - - - 0.832 0.895 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
47. sall3b ENSDARG00000057586 982 1.724 0.797 - - - - - 0.927 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
48. her13 ENSDARG00000007097 2000 1.713 0.904 - - - - - 0.809 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
49. wdr78 ENSDARG00000044400, ENSDARG00000109570 48 1.704 - 0.794 0.910 - - - - - - WD repeat domain 78 [Source:ZFIN;Acc:ZDB-GENE-050522-322]
50. tmie ENSDARG00000069423 305 1.702 0.866 - - - - - 0.836 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
51. epha4b ENSDARG00000011600 3110 1.696 0.794 - - - - - 0.902 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
52. dync1i1 ENSDARG00000060948 554 1.691 0.880 - - - - - 0.811 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
53. map2 ENSDARG00000055052 6062 1.69 0.854 - - - - - 0.836 - - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
54. GLRA3 ENSDARG00000011066 242 1.689 0.779 - - - - - 0.910 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
55. nova2 ENSDARG00000017673 7685 1.689 0.832 - - - - - 0.857 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
56. tuba1c ENSDARG00000055216 8384 1.689 0.742 - - - - - 0.947 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
57. gfap ENSDARG00000025301 5584 1.688 0.768 - - - - - 0.920 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
58. tac1 ENSDARG00000014490 781 1.686 0.923 - - - - 0.763 - - - tachykinin 1 [Source:ZFIN;Acc:ZDB-GENE-060503-904]
59. dpysl5a ENSDARG00000011141 1827 1.684 0.774 - - - - - 0.910 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
60. golga7ba ENSDARG00000036295 1460 1.683 0.753 - - - - - 0.930 - - golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
61. clvs2 ENSDARG00000053122 1390 1.68 0.769 - - - - - 0.911 - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
62. hoxc4a ENSDARG00000070338 1382 1.679 0.848 - - - - - 0.831 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
63. prdm12b ENSDARG00000007430 914 1.677 0.755 - - - - - 0.922 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
64. ENTHD1 ENTHD1 235 1.676 0.797 - - - - - 0.879 - -
65. sox21b ENSDARG00000008540 1460 1.676 0.782 - - - - - 0.894 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
66. si:dkey-169l5.3 si:dkey-169l5.3 239 1.674 - - - - - 0.797 0.877 - -
67. CABZ01080599.2 CABZ01080599.2 192 1.674 - - - - - 0.781 0.893 - -
68. ADAMTS3 ENSDARG00000060127 2839 1.673 0.896 - - - - - 0.777 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
69. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.67 0.767 - - - - - 0.903 - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
70. hoxa5a ENSDARG00000102501 1667 1.669 0.839 - - - - - 0.830 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
71. kif5c ENSDARG00000076027 424 1.668 - - - - - 0.806 0.862 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
72. pcsk1 ENSDARG00000002600 404 1.667 0.848 - - - - - 0.819 - - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
73. FAM171A2 FAM171A2 707 1.666 0.756 - - - - - 0.910 - -
74. pcdh1gc5 ENSDARG00000104826 10052 1.666 0.761 - - - - - 0.905 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
75. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.665 0.762 - - - - - 0.903 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
76. foxb1a ENSDARG00000089042 101 1.664 0.920 - - - - - 0.744 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
77. APBB3 ENSDARG00000053771 654 1.664 - - - - - 0.747 0.917 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
78. st18 663 1.656 0.800 - - - - - 0.856 - - suppression of tumorigenicity 18, zinc finger
79. her2 ENSDARG00000038205 3219 1.654 0.762 - - - - - 0.892 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
80. nell2b ENSDARG00000062797 854 1.653 0.737 - - - - - 0.916 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
81. hmp19 2554 1.652 0.801 - - - - - 0.851 - - HMP19 protein
82. BX957337.1 BX957337.1 1685 1.652 0.727 - - - - - 0.925 - -
83. lhfpl4a ENSDARG00000111810 206 1.649 - - - - - 0.802 0.847 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
84. SEMA7A ENSDARG00000078707 465 1.647 0.737 - - - - - 0.910 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
85. cdk5r2a ENSDARG00000071011 167 1.644 - - - - - 0.772 0.872 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
86. elavl4 ENSDARG00000045639 998 1.644 - - - - - 0.705 0.939 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
87. cplx2 ENSDARG00000061918, ENSDARG00000111920 3673 1.642 0.765 - - - - - 0.877 - - complexin 2 [Source:ZFIN;Acc:ZDB-GENE-081113-1]
88. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.642 0.752 - - - - - 0.890 - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
89. pou3f3a ENSDARG00000042032 2835 1.641 - - - - - 0.728 0.913 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
90. ncam1b ENSDARG00000007220 233 1.641 - - 0.747 - - - 0.894 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
91. nhlh2 ENSDARG00000025495 1860 1.641 0.790 - - - - - 0.851 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
92. sox2 ENSDARG00000070913 2763 1.64 0.816 - - - - - 0.824 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
93. elavl3 ENSDARG00000014420 8644 1.638 - - - - - 0.760 0.878 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
94. myt1b ENSDARG00000102879 5411 1.638 0.790 - - - - - 0.848 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
95. atcaya ENSDARG00000071678 344 1.637 0.758 - - - - - 0.879 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
96. myo16 ENSDARG00000078582 714 1.636 - - - - - 0.742 0.894 - - myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
97. lrrtm1 ENSDARG00000052713 1041 1.634 - - - - - 0.800 0.834 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
98. snap91 ENSDARG00000098809 844 1.633 0.717 - - - - - 0.916 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
99. sv2c ENSDARG00000059997 592 1.631 0.814 - - - - - 0.817 - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
100. GADD45G GADD45G 382 1.63 - - - - - 0.742 0.888 - -

There are 1831 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA