Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gfm1

Gene Name Gene ID Reads Annotation
gfm1 ENSDARG00000063624 523 G elongation factor, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-061013-79]










Genes with expression patterns similar to gfm1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gfm1 ENSDARG00000063624 523 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 G elongation factor, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-061013-79]
2. slc25a26 ENSDARG00000058208, ENSDARG00000110562, ENSDARG00000111558 584 1.549 0.706 - 0.843 - - - - - - solute carrier family 25 (S-adenosylmethionine carrier), member 26 [Source:ZFIN;Acc:ZDB-GENE-050913-126]
3. zgc:110366 ENSDARG00000004167 314 1.454 0.753 - - - - - - 0.701 - zgc:110366 [Source:ZFIN;Acc:ZDB-GENE-050417-302]
4. tpm1 ENSDARG00000087402 1666 1.452 - 0.701 - - - - 0.751 - - tropomyosin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-854]
5. slc25a32b ENSDARG00000026835 502 1.451 - 0.719 - - - 0.732 - - - solute carrier family 25 (mitochondrial folate carrier), member 32b [Source:ZFIN;Acc:ZDB-GENE-050306-39]
6. CU633479.5 ENSDARG00000114818 1815 1.445 - 0.709 - - - 0.736 - - -
7. NUDT12 ENSDARG00000100813 378 1.444 - - 0.733 - - - - 0.711 - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
8. apex1 ENSDARG00000045843 6345 1.441 - 0.703 - - - - 0.738 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
9. ntmt1 ENSDARG00000022399 5779 1.426 - - - - - 0.719 0.707 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
10. nmd3 ENSDARG00000015676 303 1.407 - 0.704 0.703 - - - - - - NMD3 ribosome export adaptor [Source:ZFIN;Acc:ZDB-GENE-050320-149]
11. THOP1 ENSDARG00000013776 2717 1.404 - 0.701 - - - - 0.703 - - thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
12. ldlrad3 ENSDARG00000078600 926 0.964 - - - - - - - 0.964 - low density lipoprotein receptor class A domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1533]
13. alad ENSDARG00000100372 1711 0.89 - - - - - - - 0.890 - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
14. si:dkey-93m18.3 ENSDARG00000092664 30 0.889 - - 0.889 - - - - - - si:dkey-93m18.3 [Source:ZFIN;Acc:ZDB-GENE-091204-346]
15. lysmd1 ENSDARG00000054789 277 0.889 - - - - - 0.889 - - - LysM, putative peptidoglycan-binding, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1094]
16. cdca5 ENSDARG00000044437 2041 0.882 - - - - - - - 0.882 - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
17. slc25a21 ENSDARG00000060564 344 0.88 - - 0.880 - - - - - - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
18. hsf2 ENSDARG00000053097 1188 0.875 - - - - - - - 0.875 - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
19. pdk4 ENSDARG00000054848 258 0.869 - - 0.869 - - - - - - pyruvate dehydrogenase kinase, isozyme 4 [Source:ZFIN;Acc:ZDB-GENE-060503-754]
20. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 0.867 - - 0.867 - - - - - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
21. CR848706.1 CR848706.1 128 0.862 - - 0.862 - - - - - -
22. chrna5 ENSDARG00000003420 137 0.86 - - 0.860 - - - - - - cholinergic receptor, nicotinic, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-050417-440]
23. si:ch211-162i8.4 ENSDARG00000087168, ENSDARG00000094484 69 0.854 - - 0.854 - - - - - - si:ch211-162i8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-48]
24. ncam1b ENSDARG00000007220 233 0.852 - - 0.852 - - - - - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
25. cep170a cep170a 652 0.852 - 0.852 - - - - - - -
26. pias1b ENSDARG00000062445 538 0.851 - - - - - - - 0.851 - protein inhibitor of activated STAT, 1b [Source:ZFIN;Acc:ZDB-GENE-050419-202]
27. VPS37B ENSDARG00000039319, ENSDARG00000109293 150 0.848 - - 0.848 - - - - - - vacuolar protein sorting 37 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-254]
28. zbtb25 ENSDARG00000042383 94 0.846 - - 0.846 - - - - - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
29. cacnb4a ENSDARG00000009738 28 0.846 - - 0.846 - - - - - - calcium channel, voltage-dependent, beta 4a subunit [Source:ZFIN;Acc:ZDB-GENE-080320-2]
30. galnt14 ENSDARG00000023448 102 0.846 - - 0.846 - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
31. slc12a10.2 ENSDARG00000071173 92 0.845 - - 0.845 - - - - - - solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-425]
32. si:ch211-262i10.2 12 0.844 - - 0.844 - - - - - - si:ch211-262i10.2
33. apnl ENSDARG00000090900 21 0.843 - - 0.843 - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
34. zgc:113184 ENSDARG00000098181 500 0.843 - - 0.843 - - - - - - zgc:113184 [Source:ZFIN;Acc:ZDB-GENE-050522-9]
35. si:dkey-122c11.1 ENSDARG00000093747 19 0.843 - - 0.843 - - - - - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
36. si:ch211-181d7.3 ENSDARG00000068621 87 0.843 - - 0.843 - - - - - - si:ch211-181d7.3 [Source:ZFIN;Acc:ZDB-GENE-121214-30]
37. CABZ01078314.1 CABZ01078314.1 44 0.842 - - 0.842 - - - - - -
38. si:dkey-16n15.3 223 0.842 - - - - - 0.842 - - - si:dkey-16n15.3
39. prdx1 ENSDARG00000058734 4582 0.84 - 0.840 - - - - - - - peroxiredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-050320-35]
40. tsr2 ENSDARG00000005772 1155 0.839 - 0.839 - - - - - - - TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-021231-2]
41. BX571739.1 BX571739.1 45 0.838 - - 0.838 - - - - - -
42. nup153 ENSDARG00000099972 1462 0.838 - 0.838 - - - - - - - nucleoporin 153 [Source:ZFIN;Acc:ZDB-GENE-030131-4581]
43. ft1 ENSDARG00000059056 102 0.838 - - 0.838 - - - - - - alpha(1,3)fucosyltransferase gene 1 [Source:ZFIN;Acc:ZDB-GENE-990715-17]
44. si:dkeyp-84g1.3 si:dkeyp-84g1.3 25 0.837 - - 0.837 - - - - - -
45. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 0.837 - - 0.837 - - - - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
46. si:ch211-243a22.1 si:ch211-243a22.1 42 0.836 - - 0.836 - - - - - -
47. dclk1a ENSDARG00000018856 177 0.835 - - 0.835 - - - - - - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
48. stab1 ENSDARG00000076484 717 0.832 - 0.832 - - - - - - - stabilin 1 [Source:ZFIN;Acc:ZDB-GENE-050208-554]
49. zgc:113389 zgc:113389 123 0.83 - - 0.830 - - - - - -
50. gpr183 gpr183 25 0.829 - - 0.829 - - - - - -
51. rassf10a 417 0.829 - - 0.829 - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
52. zgc:165539 ENSDARG00000027639 20 0.828 - - 0.828 - - - - - - zgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]
53. DUSP28 ENSDARG00000059695 1135 0.828 - - 0.828 - - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
54. ccl-c5a ccl-c5a 217 0.826 - - 0.826 - - - - - -
55. extl2 ENSDARG00000063191 118 0.826 - - 0.826 - - - - - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
56. sh3bp2 ENSDARG00000021982 61 0.825 - - 0.825 - - - - - - SH3-domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-268]
57. fam175b fam175b 37 0.825 - - 0.825 - - - - - -
58. mark2b ENSDARG00000032458 821 0.825 - - - - - - 0.825 - - MAP/microtubule affinity-regulating kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080215-4]
59. AREL1 ENSDARG00000100359 260 0.824 - 0.824 - - - - - - - apoptosis resistant E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20363]
60. SLC3A2 SLC3A2 135 0.824 - - 0.824 - - - - - -
61. ABCF3 ENSDARG00000089705 195 0.822 - - 0.822 - - - - - - ATP-binding cassette, sub-family F (GCN20), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-32]
62. bloc1s4 ENSDARG00000007597 365 0.82 - 0.820 - - - - - - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino [Source:ZFIN;Acc:ZDB-GENE-040801-215]
63. neurl1b ENSDARG00000099694 716 0.819 - 0.819 - - - - - - - neuralized E3 ubiquitin protein ligase 1B [Source:ZFIN;Acc:ZDB-GENE-050522-102]
64. hbegfb ENSDARG00000031246 236 0.819 - - 0.819 - - - - - - heparin-binding EGF-like growth factor b [Source:ZFIN;Acc:ZDB-GENE-070820-6]
65. FARS2 ENSDARG00000091247 202 0.819 - - 0.819 - - - - - - phenylalanyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-38]
66. narfl ENSDARG00000062216 768 0.819 - - - - - - - 0.819 - nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]
67. shrprbck1r ENSDARG00000059871 362 0.819 - - - - - 0.819 - - - sharpin and rbck1 related [Source:ZFIN;Acc:ZDB-GENE-080220-52]
68. ppp4cb ENSDARG00000076439 1693 0.817 - 0.817 - - - - - - - protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
69. cep76 ENSDARG00000058319 143 0.817 - - 0.817 - - - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
70. si:ch211-236p5.3 ENSDARG00000086418 138 0.817 - - 0.817 - - - - - - si:ch211-236p5.3 [Source:ZFIN;Acc:ZDB-GENE-081028-31]
71. tyw3 ENSDARG00000038222 385 0.816 - 0.816 - - - - - - - tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040718-355]
72. emc8 ENSDARG00000017093 1947 0.816 - - 0.816 - - - - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
73. SLC24A2 ENSDARG00000042988 242 0.814 - - 0.814 - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-277]
74. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 0.812 - 0.812 - - - - - - - ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
75. gcc1 ENSDARG00000045541 1821 0.812 - - - - - - - 0.812 - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
76. add3a ENSDARG00000040874 4938 0.811 - - - - - - 0.811 - - adducin 3 (gamma) a [Source:ZFIN;Acc:ZDB-GENE-030131-2721]
77. ric8b ENSDARG00000005972, ENSDARG00000116212 1119 0.81 - - - - - - 0.810 - - RIC8 guanine nucleotide exchange factor B [Source:ZFIN;Acc:ZDB-GENE-030131-6435]
78. CU856539.1 ENSDARG00000010023 190 0.808 - - 0.808 - - - - - - hippocampus abundant transcript 1 protein-like [Source:NCBI gene;Acc:557306]
79. mob1bb ENSDARG00000012953 873 0.807 - 0.807 - - - - - - - MOB kinase activator 1Bb [Source:ZFIN;Acc:ZDB-GENE-050522-58]
80. rreb1b ENSDARG00000042652 2731 0.807 - 0.807 - - - - - - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
81. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 0.807 - 0.807 - - - - - - - ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
82. ap5m1 ENSDARG00000031533 153 0.806 - - 0.806 - - - - - - adaptor related protein complex 5 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-050522-231]
83. raver1 ENSDARG00000052617 1189 0.806 - 0.806 - - - - - - - ribonucleoprotein, PTB-binding 1 [Source:ZFIN;Acc:ZDB-GENE-050522-99]
84. TACO1 ENSDARG00000062943, ENSDARG00000100552, ENSDARG00000115990 83 0.806 - - 0.806 - - - - - - translational activator of mitochondrially encoded cytochrome c oxidase I [Source:ZFIN;Acc:ZDB-GENE-070410-35]
85. mir21-1 606 0.805 - - - - - - - 0.805 - microRNA 21-1
86. CCDC106 CCDC106 1908 0.805 - - - - - - - 0.805 -
87. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 0.805 - - - - - 0.805 - - - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
88. tesk2 ENSDARG00000061450 261 0.805 - 0.805 - - - - - - - testis associated actin remodelling kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070209-68]
89. ssh2a ENSDARG00000088440 1149 0.804 - - - - - - - 0.804 - slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
90. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 0.803 - - 0.803 - - - - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
91. zgc:158257 831 0.803 - - 0.803 - - - - - - zgc:158257
92. si:dkey-81p22.11 ENSDARG00000093797 68 0.802 - - 0.802 - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
93. F2RL3 ENSDARG00000079399 29 0.802 - - 0.802 - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
94. ALDH1L2 ENSDARG00000070230 2550 0.802 - - 0.802 - - - - - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
95. fat1 fat1 3934 0.801 - 0.801 - - - - - - -
96. si:ch211-214p16.2 ENSDARG00000094975 59 0.801 - - 0.801 - - - - - - si:ch211-214p16.2 [Source:NCBI gene;Acc:368902]
97. wfdc2 ENSDARG00000089187 653 0.799 - - 0.799 - - - - - - WAP four-disulfide core domain 2 [Source:ZFIN;Acc:ZDB-GENE-090313-47]
98. dera ENSDARG00000005897 406 0.798 - 0.798 - - - - - - - deoxyribose-phosphate aldolase (putative) [Source:ZFIN;Acc:ZDB-GENE-041010-200]
99. wfdc1 ENSDARG00000058003 850 0.798 - 0.798 - - - - - - - WAP four-disulfide core domain 1 [Source:ZFIN;Acc:ZDB-GENE-070112-352]
100. pigo ENSDARG00000011743 928 0.798 - 0.798 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]

There are 541 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA