Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gemin4

Gene Name Gene ID Reads Annotation
gemin4 ENSDARG00000041252, ENSDARG00000115829 226 gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]










Genes with expression patterns similar to gemin4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
2. fam57ba ENSDARG00000026875 504 1.825 - 0.979 - - - - 0.846 - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
3. pgap2 ENSDARG00000044596 60 1.762 - 0.991 0.771 - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
4. tceanc2 ENSDARG00000062919 32 1.761 0.969 - - 0.792 - - - - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
5. gabrr2a ENSDARG00000052982 21 1.752 0.969 - - 0.783 - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
6. KCNIP4 ENSDARG00000088100 86 1.725 0.969 - - - - - 0.756 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
7. si:dkey-228i19.34 si:dkey-228i19.34 43 1.721 - 0.993 - - - 0.728 - - -
8. cacng6a ENSDARG00000036457 344 1.714 - 0.984 0.730 - - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
9. U1_50 U1_50 62 1.688 0.927 - 0.761 - - - - - -
10. lzts3b ENSDARG00000058558 166 1.687 0.934 - - - - - 0.753 - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
11. BTBD17_1 BTBD17_1 42 1.672 0.969 - - - - 0.703 - - -
12. gphnb ENSDARG00000100851 118 1.663 0.885 - - 0.778 - - - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
13. scn1lab ENSDARG00000062744 155 1.641 0.891 - - - - - 0.750 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
14. dock4b ENSDARG00000024874 32 1.598 0.827 - 0.771 - - - - - - dedicator of cytokinesis 4b [Source:ZFIN;Acc:ZDB-GENE-060130-74]
15. fbxo41 ENSDARG00000078908 95 1.591 0.804 - - - - - 0.787 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
16. lcor ENSDARG00000100908 291 1.579 0.756 0.823 - - - - - - - ligand dependent nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-061201-6]
17. wdr55 ENSDARG00000007217 196 1.567 - - 0.804 - - 0.763 - - - WD repeat domain 55 [Source:ZFIN;Acc:ZDB-GENE-040924-7]
18. xrcc6 ENSDARG00000071551, ENSDARG00000111115, ENSDARG00000114945 724 1.556 - 0.836 0.720 - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:ZFIN;Acc:ZDB-GENE-030131-6420]
19. thrb ENSDARG00000021163 262 1.546 - - 0.767 - - - 0.779 - - thyroid hormone receptor beta [Source:ZFIN;Acc:ZDB-GENE-990415-268]
20. nlgn2b ENSDARG00000079251, ENSDARG00000111576 179 1.535 0.807 - - - - - 0.728 - - neuroligin 2b [Source:ZFIN;Acc:ZDB-GENE-090918-3]
21. six4b ENSDARG00000031983 265 1.513 - - - - - 0.705 0.808 - - SIX homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-010201-1]
22. nhlh2 ENSDARG00000025495 1860 1.513 0.812 - - - - - 0.701 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
23. gpr98 gpr98 717 1.494 0.771 - - - - - 0.723 - -
24. THEM6 ENSDARG00000103914 49 1.492 - - - 0.770 - - 0.722 - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
25. ccdc28b ENSDARG00000011222 528 1.489 0.738 - - - - - 0.751 - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
26. zgc:114037 63 1.476 0.730 - 0.746 - - - - - - zgc:114037
27. trim2b ENSDARG00000076174 250 1.464 0.700 - - - - - 0.764 - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
28. CABZ01080599.2 CABZ01080599.2 192 1.461 0.706 - - - - - 0.755 - -
29. si:dkeyp-13d11.1 ENSDARG00000076343, ENSDARG00000096802 181 1.444 - - 0.713 - - 0.731 - - - si:dkeyp-13d11.1 [Source:ZFIN;Acc:ZDB-GENE-090313-377]
30. MAP3K2 ENSDARG00000062884 34 0.995 - 0.995 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
31. SLC38A9 ENSDARG00000032769 35 0.995 - 0.995 - - - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
32. si:ch211-105d18.6 si:ch211-105d18.6 59 0.994 - 0.994 - - - - - - -
33. CT573322.1 CT573322.1 38 0.993 - 0.993 - - - - - - -
34. U3_5 U3_5 67 0.993 - 0.993 - - - - - - -
35. CABZ01109624.1 CABZ01109624.1 25 0.993 - 0.993 - - - - - - -
36. si:ch211-39a7.1 ENSDARG00000037427 31 0.993 - 0.993 - - - - - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
37. ZP2 ZP2 14 0.993 - 0.993 - - - - - - -
38. ppapdc2 ppapdc2 67 0.992 - 0.992 - - - - - - -
39. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.992 - 0.992 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
40. foxn4 ENSDARG00000010591 2332 0.991 - 0.991 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
41. si:dkey-154p10.3 ENSDARG00000068366 153 0.991 - 0.991 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
42. CR388047.3 ENSDARG00000117023 89 0.99 - 0.990 - - - - - - -
43. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.99 - 0.990 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
44. si:ch1073-155h21.1 ENSDARG00000007582 137 0.99 - 0.990 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
45. smdt1 smdt1 99 0.99 - 0.990 - - - - - - -
46. kcnk13a ENSDARG00000008212 136 0.989 - 0.989 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
47. usp45 ENSDARG00000075013 227 0.989 - 0.989 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
48. zgc:109744 ENSDARG00000070800 262 0.989 - 0.989 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
49. C12H10orf2 C12H10orf2 245 0.989 - 0.989 - - - - - - -
50. si:dkey-114b16.4 si:dkey-114b16.4 35 0.988 - 0.988 - - - - - - -
51. cyp2aa1 ENSDARG00000099003 297 0.988 - 0.988 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
52. CABZ01066717.1 CABZ01066717.1 351 0.987 - 0.987 - - - - - - -
53. unc13d ENSDARG00000078249 91 0.987 - 0.987 - - - - - - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]
54. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.987 - 0.987 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
55. alg9 ENSDARG00000012840 631 0.986 - 0.986 - - - - - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
56. TEAD1 TEAD1 43 0.985 - 0.985 - - - - - - -
57. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.985 - 0.985 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
58. NUDT8 ENSDARG00000007722 329 0.985 - 0.985 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
59. TM2D2 ENSDARG00000035515 561 0.985 - 0.985 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
60. plce1 ENSDARG00000087921 44 0.985 - 0.985 - - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
61. casp3b ENSDARG00000055045 54 0.985 - 0.985 - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
62. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.984 - 0.984 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
63. fam63b 484 0.983 - 0.983 - - - - - - - family with sequence similarity 63, member B
64. cd74a ENSDARG00000009087 20 0.983 - 0.983 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
65. CABZ01114089.1 CABZ01114089.1 127 0.983 - 0.983 - - - - - - -
66. cflara ENSDARG00000055966 464 0.983 - 0.983 - - - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
67. UBASH3B UBASH3B 292 0.982 - 0.982 - - - - - - -
68. CR376783.1 ENSDARG00000074235 259 0.981 - 0.981 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
69. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.98 - 0.980 - - - - - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
70. casp2 ENSDARG00000062052 559 0.979 - 0.979 - - - - - - - caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
71. rnf34a ENSDARG00000038300 179 0.978 - 0.978 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
72. tbcelb ENSDARG00000019525 299 0.978 - 0.978 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
73. cmasb 499 0.974 - 0.974 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
74. acad11 ENSDARG00000045411 350 0.973 - 0.973 - - - - - - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
75. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.973 - 0.973 - - - - - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
76. kcnj1a.4 ENSDARG00000090635 356 0.972 - 0.972 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
77. si:ch211-215d8.2 ENSDARG00000093233 784 0.971 - 0.971 - - - - - - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
78. sh3pxd2aa ENSDARG00000060148 913 0.97 - 0.970 - - - - - - - SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
79. RBMS1 RBMS1 258 0.97 - 0.970 - - - - - - -
80. sowahcb ENSDARG00000059582 178 0.97 - 0.970 - - - - - - - sosondowah ankyrin repeat domain family Cb [Source:ZFIN;Acc:ZDB-GENE-061215-96]
81. esrrd ENSDARG00000015064 291 0.97 - 0.970 - - - - - - - estrogen-related receptor delta [Source:ZFIN;Acc:ZDB-GENE-040616-3]
82. RNF130 ENSDARG00000089767 559 0.97 - 0.970 - - - - - - - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
83. trmt1l ENSDARG00000042057 466 0.97 - 0.970 - - - - - - - tRNA methyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041014-189]
84. six2a ENSDARG00000058004, ENSDARG00000115214 414 0.97 - 0.970 - - - - - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
85. C20H2orf70 C20H2orf70 8 0.969 0.969 - - - - - - - -
86. si:ch211-167j6.3 ENSDARG00000095504 5 0.969 0.969 - - - - - - - - si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]
87. si:ch211-222k6.2 ENSDARG00000087046 144 0.969 0.969 - - - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
88. cpne5 cpne5 16 0.969 0.969 - - - - - - - -
89. si:dkey-14d8.19 si:dkey-14d8.19 12 0.969 0.969 - - - - - - - -
90. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 0.969 0.969 - - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
91. WDPCP ENSDARG00000074590 35 0.969 0.969 - - - - - - - - WD repeat containing planar cell polarity effector [Source:ZFIN;Acc:ZDB-GENE-100405-4]
92. chrna9 ENSDARG00000054680 4 0.969 0.969 - - - - - - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
93. TRIM46 TRIM46 73 0.969 0.969 - - - - - - - -
94. six6a ENSDARG00000025187 40 0.969 0.969 - - - - - - - - SIX homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1282]
95. CR391962.1 CR391962.1 31 0.969 0.969 - - - - - - - -
96. gpr12 ENSDARG00000062934 7 0.969 0.969 - - - - - - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
97. AL935272.2 AL935272.2 37 0.969 0.969 - - - - - - - -
98. zgc:114037_4 57 0.969 0.969 - - - - - - - - zgc:114037
99. taar16a ENSDARG00000054237 1 0.969 0.969 - - - - - - - - trace amine associated receptor 16a [Source:ZFIN;Acc:ZDB-GENE-100514-1]
100. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 0.969 0.969 - - - - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]

There are 1102 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA