Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gdnfa

Gene Name Gene ID Reads Annotation
gdnfa ENSDARG00000039959 345 glial cell derived neurotrophic factor a [Source:ZFIN;Acc:ZDB-GENE-010226-1]










Genes with expression patterns similar to gdnfa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gdnfa ENSDARG00000039959 345 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glial cell derived neurotrophic factor a [Source:ZFIN;Acc:ZDB-GENE-010226-1]
2. colec12 ENSDARG00000061140 1323 2.443 - 0.771 - - - 0.885 0.787 - - collectin sub-family member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9807]
3. plekhg6 ENSDARG00000086056 368 1.608 0.868 - - - - - - - 0.740 pleckstrin homology domain containing, family G (with RhoGef domain) member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2517]
4. pipox ENSDARG00000055591 260 1.603 - - - - - 0.845 - - 0.758 pipecolic acid oxidase [Source:ZFIN;Acc:ZDB-GENE-110627-2]
5. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 1.566 0.802 - - - - - - - 0.764 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
6. amotl2b ENSDARG00000061948 974 1.562 - 0.824 - - - 0.738 - - - angiomotin like 2b [Source:ZFIN;Acc:ZDB-GENE-061103-307]
7. ncs1a ENSDARG00000055229 310 1.549 0.734 0.815 - - - - - - - neuronal calcium sensor 1a [Source:ZFIN;Acc:ZDB-GENE-021220-1]
8. TRIM35_10 TRIM35_10 484 1.524 0.759 - - - - - - - 0.765
9. RNASEH2C ENSDARG00000089637 1673 1.517 - 0.811 - - - - 0.706 - - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
10. PLLP ENSDARG00000062756, ENSDARG00000109949 114 1.514 0.782 0.732 - - - - - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
11. pde4ba ENSDARG00000032868, ENSDARG00000110575 1024 1.512 0.763 0.749 - - - - - - - phosphodiesterase 4B, cAMP-specific a [Source:ZFIN;Acc:ZDB-GENE-030131-9570]
12. CABZ01080457.1 CABZ01080457.1 445 1.501 - 0.733 - - - - 0.768 - -
13. CEP170B ENSDARG00000074636 336 1.5 0.768 - - - - - - - 0.732 centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
14. lcmt1 ENSDARG00000045140, ENSDARG00000111263 413 1.492 0.784 0.708 - - - - - - - leucine carboxyl methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-75]
15. tnfaip8l2b ENSDARG00000046148 1133 1.484 0.745 - - - - 0.739 - - - tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
16. sfswap ENSDARG00000005980, ENSDARG00000112551 1022 1.479 0.716 - - - - - 0.763 - - splicing factor SWAP [Source:ZFIN;Acc:ZDB-GENE-040426-931]
17. faxdc2 ENSDARG00000023820 260 1.464 0.709 - - - - - - - 0.755 fatty acid hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2907]
18. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.458 - - - - - 0.701 0.757 - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
19. kank2 ENSDARG00000018393 1804 1.45 - 0.703 - - - - 0.747 - - KN motif and ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-040724-121]
20. nanos1 ENSDARG00000109337 2494 1.436 0.716 - - - - - 0.720 - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
21. nudt22 ENSDARG00000071671 411 1.419 - 0.718 - - - - 0.701 - - nudix (nucleoside diphosphate linked moiety X)-type motif 22 [Source:ZFIN;Acc:ZDB-GENE-041010-171]
22. RAB11FIP5 RAB11FIP5 626 1.413 0.709 - - - - - - - 0.704
23. nanp ENSDARG00000075143, ENSDARG00000114467 328 0.907 0.907 - - - - - - - - N-acetylneuraminic acid phosphatase [Source:ZFIN;Acc:ZDB-GENE-050522-94]
24. PARP6_1 PARP6_1 331 0.896 0.896 - - - - - - - -
25. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 0.88 0.880 - - - - - - - - PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
26. slu7 ENSDARG00000038870 1311 0.878 - - - - - 0.878 - - - SLU7 homolog, splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-62]
27. apoa1bp 529 0.876 0.876 - - - - - - - - apolipoprotein A-I binding protein
28. pnpla3 ENSDARG00000102020 163 0.876 0.876 - - - - - - - - patatin-like phospholipase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-27]
29. dio3b ENSDARG00000095767 521 0.875 - - - - - 0.875 - - - iodothyronine deiodinase 3b [Source:NCBI gene;Acc:798872]
30. gucd1 ENSDARG00000068438, ENSDARG00000111855 438 0.874 - - - - - 0.874 - - - guanylyl cyclase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-872]
31. zhx2 zhx2 365 0.872 0.872 - - - - - - - -
32. hbl4 ENSDARG00000054202, ENSDARG00000109644 248 0.872 0.872 - - - - - - - - hexose-binding lectin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-287]
33. nfe2l1a ENSDARG00000030616, ENSDARG00000116760 68 0.868 0.868 - - - - - - - - nuclear factor, erythroid 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-040630-5]
34. gb:ai877918 ENSDARG00000100179 173 0.866 0.866 - - - - - - - - expressed sequence AI877918 [Source:ZFIN;Acc:ZDB-GENE-090506-8]
35. itga5 ENSDARG00000006353 1876 0.863 - - - - - 0.863 - - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
36. vasnb ENSDARG00000102565 629 0.856 - 0.856 - - - - - - - vasorin b [Source:ZFIN;Acc:ZDB-GENE-110714-1]
37. fam193a ENSDARG00000102787 617 0.854 - - - - - - 0.854 - - family with sequence similarity 193, member A [Source:ZFIN;Acc:ZDB-GENE-080917-25]
38. rps6kb1a ENSDARG00000018399 627 0.85 - - - - - 0.850 - - - ribosomal protein S6 kinase b, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-091113-52]
39. slc47a1 ENSDARG00000046012 1426 0.849 - - - - - 0.849 - - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
40. ZNF337_3 ZNF337_3 561 0.848 - 0.848 - - - - - - -
41. suclg2 ENSDARG00000044914 7950 0.843 - - - - - 0.843 - - - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
42. BX548000.3 BX548000.3 241 0.84 0.840 - - - - - - - -
43. cfhl2 ENSDARG00000103760, ENSDARG00000110252 579 0.84 - - - - - 0.840 - - - complement factor H like 2 [Source:ZFIN;Acc:ZDB-GENE-041114-123]
44. osr1 ENSDARG00000014091 770 0.838 - - - - - 0.838 - - - odd-skipped related transciption factor 1 [Source:ZFIN;Acc:ZDB-GENE-070321-1]
45. fbxw8 ENSDARG00000079089 571 0.837 0.837 - - - - - - - - F-box and WD repeat domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-080204-111]
46. cfd ENSDARG00000039579, ENSDARG00000110892, ENSDARG00000115542 670 0.837 - - - - - 0.837 - - - complement factor D (adipsin) [Source:ZFIN;Acc:ZDB-GENE-050522-411]
47. rabl3 ENSDARG00000040959 271 0.836 0.836 - - - - - - - - RAB, member of RAS oncogene family-like 3 [Source:ZFIN;Acc:ZDB-GENE-040808-11]
48. slc39a5 ENSDARG00000079525 2157 0.836 - - - - - 0.836 - - - solute carrier family 39 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060608-1]
49. si:ch211-203c7.2 si:ch211-203c7.2 885 0.835 - - - - - 0.835 - - -
50. daxx ENSDARG00000000729 734 0.833 - 0.833 - - - - - - - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
51. golga1 ENSDARG00000008979 779 0.827 0.827 - - - - - - - - golgin A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1237]
52. tmem168b ENSDARG00000062168 17 0.826 0.826 - - - - - - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
53. si:ch211-117i10.10 si:ch211-117i10.10 18 0.826 0.826 - - - - - - - -
54. drg2 ENSDARG00000006642 1167 0.821 - - - - - - 0.821 - - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
55. serpinc1 ENSDARG00000042684, ENSDARG00000110644, ENSDARG00000114606 1045 0.82 - - - - - 0.820 - - - serpin peptidase inhibitor, clade C (antithrombin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-264]
56. bfb ENSDARG00000005616, ENSDARG00000110364 30 0.82 0.820 - - - - - - - - complement component bfb [Source:ZFIN;Acc:ZDB-GENE-990415-34]
57. CCDC108 CCDC108 74 0.82 0.820 - - - - - - - -
58. ltc4s ENSDARG00000062598 138 0.818 0.818 - - - - - - - - leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
59. birc7 ENSDARG00000058082, ENSDARG00000109504 299 0.818 0.818 - - - - - - - - baculoviral IAP repeat containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-35]
60. BX004812.1 ENSDARG00000096968 5467 0.818 - - - - - 0.818 - - -
61. grsf1 ENSDARG00000053021 2752 0.817 - - - - - - 0.817 - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
62. FP236789.1 ENSDARG00000105406 57 0.817 0.817 - - - - - - - -
63. rorb ENSDARG00000033498 544 0.817 - - - - - 0.817 - - - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
64. col6a1 ENSDARG00000074908 2339 0.817 - - - - - 0.817 - - - collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
65. ches1 ENSDARG00000043553 96 0.816 0.816 - - - - - - - - checkpoint suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-040217-1]
66. SLC22A23 ENSDARG00000078856 2921 0.815 - - - - - 0.815 - - - solute carrier family 22, member 23 [Source:ZFIN;Acc:ZDB-GENE-030131-3564]
67. SGPP1 ENSDARG00000060534 1802 0.813 - - - - - 0.813 - - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
68. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.813 0.813 - - - - - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
69. crb2a ENSDARG00000060106 1307 0.813 - 0.813 - - - - - - - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
70. lpar1 ENSDARG00000099840 2010 0.812 - - - - - - 0.812 - - lysophosphatidic acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030616-499]
71. asah1b ENSDARG00000034817, ENSDARG00000116060 689 0.81 - - - - - 0.810 - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1512]
72. efnb3a ENSDARG00000112993 399 0.81 - 0.810 - - - - - - - ephrin-B3a [Source:ZFIN;Acc:ZDB-GENE-100316-1]
73. col12a1a ENSDARG00000078322 1833 0.809 - - - - - 0.809 - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
74. AP5B1 ENSDARG00000078805 62 0.809 0.809 - - - - - - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
75. si:dkey-157l19.2 ENSDARG00000060340 635 0.808 - - - - - 0.808 - - - si:dkey-157l19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-190]
76. slc11a2 ENSDARG00000024295 3197 0.807 - - - - - 0.807 - - - solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-021115-1]
77. osbpl3a ENSDARG00000033251 477 0.807 - - - - - - - - 0.807 oxysterol binding protein-like 3a [Source:ZFIN;Acc:ZDB-GENE-040912-77]
78. zgc:113443 359 0.806 0.806 - - - - - - - - zgc:113443, transcript variant X3
79. podxl ENSDARG00000031228 1744 0.806 - - - - - - 0.806 - - podocalyxin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2805]
80. klf11b ENSDARG00000013794 646 0.806 0.806 - - - - - - - - Kruppel-like factor 11b [Source:ZFIN;Acc:ZDB-GENE-061103-82]
81. C19H1orf172 C19H1orf172 105 0.806 0.806 - - - - - - - -
82. eng2a eng2a 186 0.805 0.805 - - - - - - - -
83. slc30a8 ENSDARG00000100917 761 0.805 - - - - - 0.805 - - - solute carrier family 30 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060315-10]
84. nadkb ENSDARG00000060362 957 0.804 - - - - - 0.804 - - - NAD kinase b [Source:ZFIN;Acc:ZDB-GENE-061103-433]
85. DHX29 ENSDARG00000040326 431 0.804 - 0.804 - - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Source:ZFIN;Acc:ZDB-GENE-130530-606]
86. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 0.804 - - - - - 0.804 - - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
87. PRKCA_1 ENSDARG00000099841 12 0.803 0.803 - - - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
88. fam101a 4 0.803 0.803 - - - - - - - - family with sequence similarity 101, member A
89. ZNF648 ENSDARG00000104823 194 0.803 0.803 - - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
90. sntg2 ENSDARG00000101660 19 0.803 0.803 - - - - - - - - syntrophin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-060526-196]
91. si:ch211-67f13.7 ENSDARG00000077845 8 0.803 0.803 - - - - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
92. slc24a4b ENSDARG00000067509 33 0.803 0.803 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
93. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 0.803 0.803 - - - - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
94. SYTL1 ENSDARG00000070094 282 0.803 0.803 - - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
95. si:ch211-76m11.15 ENSDARG00000098979 6 0.803 0.803 - - - - - - - - si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
96. GPR180 73 0.803 0.803 - - - - - - - - G protein-coupled receptor 180, transcript variant X2
97. CR848761.1 CR848761.1 4 0.803 0.803 - - - - - - - -
98. si:dkey-199f5.6 ENSDARG00000094400 51 0.803 0.803 - - - - - - - - si:dkey-199f5.6 [Source:ZFIN;Acc:ZDB-GENE-100922-107]
99. si:dkey-13n15.2 ENSDARG00000061806, ENSDARG00000094417 4 0.803 0.803 - - - - - - - - si:dkey-13n15.2 [Source:ZFIN;Acc:ZDB-GENE-060526-209]
100. si:dkey-197d18.1 si:dkey-197d18.1 4 0.803 0.803 - - - - - - - -

There are 667 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA