Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gdf9

Gene Name Gene ID Reads Annotation
gdf9 ENSDARG00000003229 4 growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]










Genes with expression patterns similar to gdf9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gdf9 ENSDARG00000003229 4 6 1.000 - 1.000 1.000 - 1.000 - 1.000 1.000 growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]
2. lrguk ENSDARG00000069698 5 2.873 - - 1.000 1.000 - 0.873 - - - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
3. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 2 1.000 - - - - 1.000 - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
4. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 2 1.000 - 1.000 - - - - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
5. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 2 - - - - - 1.000 - - 1.000 si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
6. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 2 1.000 - 1.000 - - - - - -
7. mcm5_1 ENSDARG00000019507 10 2 1.000 - - - - 1.000 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
8. chia.4 ENSDARG00000008541 14 2 - - 1.000 1.000 - - - - - chitinase, acidic.4 [Source:ZFIN;Acc:ZDB-GENE-030131-9279]
9. EVI5L ENSDARG00000052766 8 2 - - - 1.000 - 1.000 - - - ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
10. RBBP6_3 RBBP6_3 34 2 1.000 - - - - 1.000 - - -
11. CR927050.1 ENSDARG00000099180 5 2 - - - 1.000 - 1.000 - - -
12. BX537350.1 BX537350.1 8 1.897 - - - - - 1.000 - - 0.897
13. si:dkey-188i13.10 ENSDARG00000075151 22 1.86 0.860 - 1.000 - - - - - - si:dkey-188i13.10 [Source:ZFIN;Acc:ZDB-GENE-090313-208]
14. MDFI ENSDARG00000089564 8 1.844 1.000 - - - - - - 0.844 - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
15. TMEM121 TMEM121 4 1.844 - - - 1.000 - - - 0.844 -
16. ENSDARG00000043008 ENSDARG00000043008 8 1.844 - - - 1.000 - - - 0.844 -
17. SNORD18_2 SNORD18_2 7 1.844 1.000 - - - - - - 0.844 -
18. BX005410.2 BX005410.2 44 1.79 - - 1.000 - - 0.790 - - -
19. zgc:113886 ENSDARG00000077712, ENSDARG00000100587, ENSDARG00000108812 19 1.79 - - 1.000 - - - - 0.790 - zgc:113886 [Source:ZFIN;Acc:ZDB-GENE-050913-91]
20. p4ha3 ENSDARG00000103692 2 1.775 - - 0.775 - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide III [Source:ZFIN;Acc:ZDB-GENE-041010-4]
21. cers4a ENSDARG00000031387 19 1.747 - - - - - 1.000 - - 0.747 ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
22. hcrt ENSDARG00000070932 4 1.744 1.000 - 0.744 - - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
23. HIPK1 HIPK1 8 1.739 - - - - - 1.000 - - 0.739
24. nudt18 ENSDARG00000041576 61 1.724 0.724 - - - - 1.000 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
25. cryba2b ENSDARG00000041925 4329 1.719 0.719 - - - - 1.000 - - - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
26. NEK11 ENSDARG00000087564 40 1.713 - - 1.000 - - 0.713 - - - NIMA-related kinase 11 [Source:ZFIN;Acc:ZDB-GENE-100922-73]
27. wasb ENSDARG00000026350 139 1.669 0.812 - - - - 0.857 - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
28. gnrh2 ENSDARG00000044754, ENSDARG00000116186 55 1.664 - - - - - 0.842 - 0.822 - gonadotropin-releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-030516-1]
29. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1.641 - - - - - 0.744 - - 0.897 si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
30. ggh ENSDARG00000037176 9 1.586 0.825 - - - - 0.761 - - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
31. GIGYF1_2 GIGYF1_2 22 1.584 - - 0.819 - - 0.765 - - -
32. PEG3_27 PEG3_27 10 1.523 - - - - - 0.717 - - 0.806
33. si:dkey-66i24.10 si:dkey-66i24.10 6 1 - - - - - 1.000 - - -
34. CU469509.3 CU469509.3 1 1 1.000 - - - - - - - -
35. si:dkey-190j3.4 ENSDARG00000100743 1 1 - - - 1.000 - - - - - si:dkey-190j3.4 [Source:ZFIN;Acc:ZDB-GENE-070424-218]
36. CU633991.1 CU633991.1 16 1 - - - 1.000 - - - - -
37. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - - 1.000 - - - - -
38. CABZ01089980.1 ENSDARG00000117446 16 1 - - 1.000 - - - - - -
39. RAB38 122 1 - - - - - 1.000 - - - RAB38, member RAS oncogene family
40. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - 1.000 - - - - -
41. sult1st8 sult1st8 6 1 - - 1.000 - - - - - -
42. SLC26A6 ENSDARG00000055835, ENSDARG00000097292 62 1 1.000 - - - - - - - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
43. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1 1.000 - - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
44. nots ENSDARG00000099824 9 1 - - 1.000 - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
45. rhcgb ENSDARG00000100265 4 1 - - 1.000 - - - - - - Rh family, C glycoprotein b [Source:ZFIN;Acc:ZDB-GENE-040426-2595]
46. irge4 ENSDARG00000070317 1 1 - - - - - 1.000 - - - immunity-related GTPase family, e4 [Source:ZFIN;Acc:ZDB-GENE-051212-2]
47. CT027569.1 CT027569.1 5 1 - - - - - 1.000 - - -
48. LRFN4_1 LRFN4_1 5 1 - - - 1.000 - - - - -
49. CABZ01066439.2 CABZ01066439.2 5 1 1.000 - - - - - - - -
50. si:dkey-228i19.32 si:dkey-228i19.32 9 1 - - 1.000 - - - - - -
51. hlcs ENSDARG00000039934 2 1 - - - - - 1.000 - - - holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) [Source:ZFIN;Acc:ZDB-GENE-030131-5333]
52. e2f5 ENSDARG00000038812 388 1 1.000 - - - - - - - - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
53. zgc:113691 ENSDARG00000038898 36 1 1.000 - - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
54. rnaset2l ENSDARG00000058413 17 1 - - 1.000 - - - - - - ribonuclease T2, like [Source:ZFIN;Acc:ZDB-GENE-090819-2]
55. zgc:100951 ENSDARG00000111442 24 1 - - 1.000 - - - - - - zgc:100951 [Source:ZFIN;Acc:ZDB-GENE-040801-141]
56. CU467646.3 ENSDARG00000099076 36 1 - - - - - 1.000 - - - mucin-2-like [Source:NCBI gene;Acc:108179180]
57. cpo ENSDARG00000077688 1 1 - - 1.000 - - - - - - carboxypeptidase O [Source:ZFIN;Acc:ZDB-GENE-070619-6]
58. BX511061.2 BX511061.2 30 1 1.000 - - - - - - - -
59. kcnj1a.2 ENSDARG00000090866 8 1 - - - - - 1.000 - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050327-22]
60. si:ch211-76m11.15 ENSDARG00000098979 6 1 - - - - - 1.000 - - - si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
61. si:dkey-105n5.3 si:dkey-105n5.3 9 1 - - - 1.000 - - - - -
62. Metazoa_SRP_15 Metazoa_SRP_15 2 1 - - - - - 1.000 - - -
63. CU633857.1 ENSDARG00000115315 21 1 - - - - - 1.000 - - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
64. crfb13 crfb13 2 1 1.000 - - - - - - - -
65. mmp23bb ENSDARG00000009825 133 1 1.000 - - - - - - - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
66. sult3st3 ENSDARG00000042920, ENSDARG00000094089 1 1 - - - - - 1.000 - - - sulfotransferase family 3, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-628]
67. ZNRF4 ZNRF4 16 1 - - - - - 1.000 - - -
68. ttc12 ENSDARG00000056896 97 1 1.000 - - - - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
69. vwa2 ENSDARG00000075441 44 1 - - - 1.000 - - - - - von Willebrand factor A domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100302-1]
70. CU459084.1 CU459084.1 4 1 - - - 1.000 - - - - -
71. si:dkey-30f3.1 si:dkey-30f3.1 0 1 - - 1.000 - - - - - -
72. si:ch211-222f23.6 ENSDARG00000042880 3 1 - - - - - 1.000 - - - si:ch211-222f23.6 [Source:ZFIN;Acc:ZDB-GENE-070912-208]
73. si:ch211-150o20.5 si:ch211-150o20.5 1 1 1.000 - - - - - - - -
74. MFAP4_1 MFAP4_1 3 1 - - 1.000 - - - - - -
75. BX465203.1 ENSDARG00000113985 8 1 1.000 - - - - - - - -
76. BX005376.2 BX005376.2 1 1 - - - - - 1.000 - - -
77. il15l ENSDARG00000007743, ENSDARG00000109605 17 1 1.000 - - - - - - - - interleukin 15, like [Source:ZFIN;Acc:ZDB-GENE-041111-173]
78. oxtrl ENSDARG00000044175 10 1 - - 1.000 - - - - - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
79. HELZ2 ENSDARG00000012600 2 1 - - 1.000 - - - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
80. si:ch211-1e14.4 si:ch211-1e14.4 1 1 1.000 - - - - - - - -
81. fam169b ENSDARG00000069321 5 1 - - 1.000 - - - - - - family with sequence similarity 169, member B [Source:ZFIN;Acc:ZDB-GENE-050419-217]
82. fem1a ENSDARG00000067966 11 1 - - - - - 1.000 - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
83. brwd3 ENSDARG00000035540 92 1 - - - - - 1.000 - - - bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
84. FRMD7 ENSDARG00000068958 17 1 - - 1.000 - - - - - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
85. zgc:153311 ENSDARG00000015964 85 1 - - - - - 1.000 - - - zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
86. zgc:123107 ENSDARG00000101675 3 1 - - 1.000 - - - - - - zgc:123107 [Source:ZFIN;Acc:ZDB-GENE-051113-192]
87. si:dkey-209n16.2 ENSDARG00000095914 27 1 1.000 - - - - - - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
88. erbb4a ENSDARG00000063207 55 1 1.000 - - - - - - - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
89. f13b ENSDARG00000101353 2 1 - - - - - 1.000 - - - coagulation factor XIII, B polypeptide [Source:ZFIN;Acc:ZDB-GENE-050208-701]
90. mei4 ENSDARG00000043912 10 1 - - - - - 1.000 - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
91. CABZ01078919.1 CABZ01078919.1 0 1 - - - 1.000 - - - - -
92. CT583625.3 ENSDARG00000095148 0 1 - - - 1.000 - - - - -
93. GMIP ENSDARG00000077249 43 1 1.000 - - - - - - - - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
94. si:dkey-21h14.8 ENSDARG00000096083 1 1 - - - - - 1.000 - - - si:dkey-21h14.8 [Source:ZFIN;Acc:ZDB-GENE-110913-34]
95. raf1a ENSDARG00000096415, ENSDARG00000102328 2 1 - - - - - 1.000 - - - Raf-1 proto-oncogene, serine/threonine kinase a [Source:ZFIN;Acc:ZDB-GENE-990415-41]
96. si:dkey-208a9.1 si:dkey-208a9.1 3 1 - - - 1.000 - - - - -
97. pik3r5 ENSDARG00000102762 56 1 1.000 - - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
98. CABZ01021454.2 CABZ01021454.2 3 1 - - 1.000 - - - - - -
99. fank1 ENSDARG00000039657 9 1 1.000 - - - - - - - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
100. si:dkey-58f10.14 ENSDARG00000095026 7 1 - - - - - 1.000 - - - si:dkey-58f10.14 [Source:ZFIN;Acc:ZDB-GENE-060526-316]

There are 808 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA