Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gcshb

Gene Name Gene ID Reads Annotation
gcshb ENSDARG00000105187 182 glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]










Genes with expression patterns similar to gcshb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gcshb ENSDARG00000105187 182 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
2. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1.858 1.000 - - - 0.858 - - - -
3. sox11a ENSDARG00000077811 25 1.811 1.000 - - - 0.811 - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
4. hspbap1 ENSDARG00000033771 41 1.77 1.000 - 0.770 - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
5. FP103003.1 FP103003.1 167 1.762 - 0.865 - 0.897 - - - - -
6. si:ch211-133l11.10 ENSDARG00000005626 381 1.745 0.849 - - 0.896 - - - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
7. ppil6 ENSDARG00000042157 45 1.735 - - - - 0.840 - 0.895 - - peptidylprolyl isomerase (cyclophilin)-like 6 [Source:ZFIN;Acc:ZDB-GENE-050522-70]
8. foxf1 ENSDARG00000015399 205 1.668 - 0.913 - - 0.755 - - - - forkhead box F1 [Source:ZFIN;Acc:ZDB-GENE-050419-153]
9. nr5a2 ENSDARG00000100940 1488 1.603 - - - 0.817 - - 0.786 - - nuclear receptor subfamily 5, group A, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-79]
10. C12H10orf71 C12H10orf71 595 1.602 - - - 0.871 - 0.731 - - -
11. mecp2 ENSDARG00000014218 269 1.597 - - - 0.803 - - 0.794 - - methyl CpG binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7190]
12. antxr1a ENSDARG00000025672 32 1.592 0.732 - - - 0.860 - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
13. nf1b ENSDARG00000004184 548 1.588 - - - 0.853 - - 0.735 - - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
14. SNORA21 SNORA21 547 1.582 - 0.804 - 0.778 - - - - -
15. rpf2 ENSDARG00000043960 2719 1.578 - - - 0.821 - 0.757 - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
16. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 1.567 - - - 0.831 0.736 - - - -
17. ttll6 ENSDARG00000054023, ENSDARG00000109623 147 1.556 - - - - - 0.799 0.757 - - tubulin tyrosine ligase-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080107-1]
18. cyp2p10 ENSDARG00000042990 176 1.555 0.815 - - - - - 0.740 - - cytochrome P450, family 2, subfamily P, polypeptide 10 [Source:ZFIN;Acc:ZDB-GENE-040120-1]
19. rnf181 ENSDARG00000023958 270 1.555 - 0.716 - 0.839 - - - - - ring finger protein 181 [Source:ZFIN;Acc:ZDB-GENE-040426-1024]
20. tmie ENSDARG00000069423 305 1.544 - 0.705 - 0.839 - - - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
21. ift52 ENSDARG00000045025 606 1.519 - 0.749 - 0.770 - - - - - intraflagellar transport 52 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-3]
22. dffa ENSDARG00000055770 294 1.516 - 0.747 - - - - 0.769 - - DNA fragmentation factor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040718-376]
23. foxc1a ENSDARG00000091481 1059 1.506 - - - - - 0.796 0.710 - - forkhead box C1a [Source:ZFIN;Acc:ZDB-GENE-010302-1]
24. skiv2l ENSDARG00000062206 268 1.502 - - - 0.797 - 0.705 - - - SKI2 homolog, superkiller viralicidic activity 2-like [Source:ZFIN;Acc:ZDB-GENE-010430-5]
25. si:dkey-11c5.11 ENSDARG00000096637 130 1.499 - - - - 0.754 - 0.745 - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
26. si:ch211-10a23.2 ENSDARG00000060656 471 1.499 0.797 0.702 - - - - - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
27. coq3 ENSDARG00000069857, ENSDARG00000110000 708 1.493 - - - 0.760 - 0.733 - - - coenzyme Q3 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040718-364]
28. CABZ01018247.1 CABZ01018247.1 609 1.486 - - - 0.782 - 0.704 - - -
29. C17H14orf159 128 1.471 - - - - - 0.725 0.746 - - c17h14orf159 homolog (H. sapiens)
30. ttc12 ENSDARG00000056896 97 1.459 - - - - - 0.711 0.748 - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
31. tnfaip8l3 ENSDARG00000088709 345 1.457 - - - - - 0.732 0.725 - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
32. TDRD15 TDRD15 46 1 1.000 - - - - - - - -
33. si:dkeyp-69e1.8 ENSDARG00000055731 35 1 1.000 - - - - - - - - si:dkeyp-69e1.8 [Source:ZFIN;Acc:ZDB-GENE-070912-676]
34. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 1.000 - - - - - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
35. si:dkey-262g12.2 si:dkey-262g12.2 9 1 1.000 - - - - - - - -
36. ZNF337_10 ZNF337_10 183 1 1.000 - - - - - - - -
37. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 1.000 - - - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
38. MPP4 MPP4 1 1 1.000 - - - - - - - -
39. fkbp5 ENSDARG00000028396 20 1 1.000 - - - - - - - - FK506 binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-030616-630]
40. BEND2_1 BEND2_1 45 1 1.000 - - - - - - - -
41. FBF1 FBF1 13 1 1.000 - - - - - - - -
42. SLITRK4 ENSDARG00000079781 54 1 1.000 - - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
43. nots ENSDARG00000099824 9 1 1.000 - - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
44. si:dkey-89j23.3 si:dkey-89j23.3 9 1 1.000 - - - - - - - -
45. zfyve19 ENSDARG00000003642 12 1 1.000 - - - - - - - - zinc finger, FYVE domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-040718-109]
46. zgc:92275 ENSDARG00000034048 9 1 1.000 - - - - - - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
47. DNAI2 DNAI2 6 1 1.000 - - - - - - - -
48. si:ch211-225b11.4 ENSDARG00000093563 42 1 1.000 - - - - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
49. AL645691.4 AL645691.4 0 1 1.000 - - - - - - - -
50. rag2 ENSDARG00000052121 15 1 1.000 - - - - - - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
51. U1_32 U1_32 2 1 1.000 - - - - - - - -
52. tctn2 ENSDARG00000035633 84 1 1.000 - - - - - - - - tectonic family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-751]
53. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 1.000 - - - - - - - -
54. atrnl1a ENSDARG00000077188 66 1 1.000 - - - - - - - - attractin-like 1a [Source:ZFIN;Acc:ZDB-GENE-081028-60]
55. zgc:113397 zgc:113397 60 1 1.000 - - - - - - - -
56. CU326366.2 ENSDARG00000068593 11 1 1.000 - - - - - - - -
57. celsr2l celsr2l 1 1 1.000 - - - - - - - -
58. LRRC71 LRRC71 11 1 1.000 - - - - - - - -
59. BIN1 BIN1 11 1 1.000 - - - - - - - -
60. RIMBP2_1 RIMBP2_1 57 1 1.000 - - - - - - - -
61. zgc:171626 zgc:171626 42 1 1.000 - - - - - - - -
62. si:rp71-1f1.4 ENSDARG00000092476 11 1 1.000 - - - - - - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
63. syce2 ENSDARG00000103187 12 1 1.000 - - - - - - - - synaptonemal complex central element protein 2 [Source:ZFIN;Acc:ZDB-GENE-050512-1]
64. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 1.000 - - - - - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
65. CABZ01090303.1 CABZ01090303.1 2 1 1.000 - - - - - - - -
66. rx3 ENSDARG00000052893 43 1 1.000 - - - - - - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
67. si:dkey-35m8.1 ENSDARG00000094587 0 1 1.000 - - - - - - - - si:dkey-35m8.1 [Source:ZFIN;Acc:ZDB-GENE-060526-296]
68. PCBP3 ENSDARG00000054378 17 1 1.000 - - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
69. ZNF135_1 ZNF135_1 1 1 1.000 - - - - - - - -
70. zgc:110434 21 1 1.000 - - - - - - - - zgc:110434
71. KLHDC8A ENSDARG00000061000 13 1 1.000 - - - - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
72. CABZ01078431.1 CABZ01078431.1 183 1 1.000 - - - - - - - -
73. TMEM245 ENSDARG00000070455 85 1 1.000 - - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
74. grm1a ENSDARG00000026796 9 1 1.000 - - - - - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
75. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 1.000 - - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
76. cnn1a ENSDARG00000017193 6 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
77. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
78. si:dkey-57a22.12 si:dkey-57a22.12 23 1 1.000 - - - - - - - -
79. si:ch211-219a15.3 ENSDARG00000087659 12 1 1.000 - - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
80. si:dkey-148a12.2 si:dkey-148a12.2 1 1 1.000 - - - - - - - -
81. tekt1 ENSDARG00000101331 27 1 1.000 - - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
82. BX927369.1 ENSDARG00000105047 21 1 1.000 - - - - - - - -
83. si:ch211-190k17.19 ENSDARG00000095756 19 1 1.000 - - - - - - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
84. si:dkey-204f11.49p si:dkey-204f11.49p 97 1 1.000 - - - - - - - -
85. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
86. cnfn ENSDARG00000041115 21 1 1.000 - - - - - - - - cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110]
87. zgc:172053 ENSDARG00000038321 9 1 1.000 - - - - - - - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
88. tmem179b ENSDARG00000069495 17 1 1.000 - - - - - - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
89. mxc ENSDARG00000024789 68 1 1.000 - - - - - - - - myxovirus (influenza virus) resistance C [Source:ZFIN;Acc:ZDB-GENE-030721-7]
90. mir124-1 10 1 1.000 - - - - - - - - microRNA 124-1
91. znf652 ENSDARG00000062302 17 1 1.000 - - - - - - - - zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
92. U3_10 U3_10 1 1 1.000 - - - - - - - -
93. otx5 ENSDARG00000043483 282 1 1.000 - - - - - - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
94. gnai3 ENSDARG00000030644 29 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
95. CCDC74B CCDC74B 8 1 1.000 - - - - - - - -
96. wbscr27 wbscr27 70 1 1.000 - - - - - - - -
97. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1 1.000 - - - - - - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
98. pdia2 ENSDARG00000018263 74 1 1.000 - - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
99. slc44a5a ENSDARG00000017398 5 1 1.000 - - - - - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
100. si:dkey-188p4.1 si:dkey-188p4.1 1 1 1.000 - - - - - - - -

There are 1065 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA