Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gcshb

Gene Name Gene ID Reads Annotation
gcshb ENSDARG00000105187 182 glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]










Genes with expression patterns similar to gcshb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gcshb ENSDARG00000105187 182 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
2. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1.858 1.000 - - - 0.858 - - - -
3. sox11a ENSDARG00000077811 25 1.811 1.000 - - - 0.811 - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
4. hspbap1 ENSDARG00000033771 41 1.77 1.000 - 0.770 - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
5. FP103003.1 FP103003.1 167 1.762 - 0.865 - 0.897 - - - - -
6. si:ch211-133l11.10 ENSDARG00000005626 381 1.745 0.849 - - 0.896 - - - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
7. ppil6 ENSDARG00000042157 45 1.735 - - - - 0.840 - 0.895 - - peptidylprolyl isomerase (cyclophilin)-like 6 [Source:ZFIN;Acc:ZDB-GENE-050522-70]
8. foxf1 ENSDARG00000015399 205 1.668 - 0.913 - - 0.755 - - - - forkhead box F1 [Source:ZFIN;Acc:ZDB-GENE-050419-153]
9. nr5a2 ENSDARG00000100940 1488 1.603 - - - 0.817 - - 0.786 - - nuclear receptor subfamily 5, group A, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-79]
10. C12H10orf71 C12H10orf71 595 1.602 - - - 0.871 - 0.731 - - -
11. mecp2 ENSDARG00000014218 269 1.597 - - - 0.803 - - 0.794 - - methyl CpG binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7190]
12. antxr1a ENSDARG00000025672 32 1.592 0.732 - - - 0.860 - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
13. nf1b ENSDARG00000004184 548 1.588 - - - 0.853 - - 0.735 - - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
14. SNORA21 SNORA21 547 1.582 - 0.804 - 0.778 - - - - -
15. rpf2 ENSDARG00000043960 2719 1.578 - - - 0.821 - 0.757 - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
16. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 1.567 - - - 0.831 0.736 - - - -
17. ttll6 ENSDARG00000054023, ENSDARG00000109623 147 1.556 - - - - - 0.799 0.757 - - tubulin tyrosine ligase-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080107-1]
18. cyp2p10 ENSDARG00000042990 176 1.555 0.815 - - - - - 0.740 - - cytochrome P450, family 2, subfamily P, polypeptide 10 [Source:ZFIN;Acc:ZDB-GENE-040120-1]
19. rnf181 ENSDARG00000023958 270 1.555 - 0.716 - 0.839 - - - - - ring finger protein 181 [Source:ZFIN;Acc:ZDB-GENE-040426-1024]
20. tmie ENSDARG00000069423 305 1.544 - 0.705 - 0.839 - - - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
21. ift52 ENSDARG00000045025 606 1.519 - 0.749 - 0.770 - - - - - intraflagellar transport 52 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-3]
22. dffa ENSDARG00000055770 294 1.516 - 0.747 - - - - 0.769 - - DNA fragmentation factor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040718-376]
23. foxc1a ENSDARG00000091481 1059 1.506 - - - - - 0.796 0.710 - - forkhead box C1a [Source:ZFIN;Acc:ZDB-GENE-010302-1]
24. skiv2l ENSDARG00000062206 268 1.502 - - - 0.797 - 0.705 - - - SKI2 homolog, superkiller viralicidic activity 2-like [Source:ZFIN;Acc:ZDB-GENE-010430-5]
25. si:ch211-10a23.2 ENSDARG00000060656 471 1.499 0.797 0.702 - - - - - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
26. si:dkey-11c5.11 ENSDARG00000096637 130 1.499 - - - - 0.754 - 0.745 - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
27. coq3 ENSDARG00000069857, ENSDARG00000110000 708 1.493 - - - 0.760 - 0.733 - - - coenzyme Q3 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040718-364]
28. CABZ01018247.1 CABZ01018247.1 609 1.486 - - - 0.782 - 0.704 - - -
29. C17H14orf159 128 1.471 - - - - - 0.725 0.746 - - c17h14orf159 homolog (H. sapiens)
30. ttc12 ENSDARG00000056896 97 1.459 - - - - - 0.711 0.748 - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
31. tnfaip8l3 ENSDARG00000088709 345 1.457 - - - - - 0.732 0.725 - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
32. CABZ01087549.1 CABZ01087549.1 108 1 1.000 - - - - - - - -
33. zfyve19 ENSDARG00000003642 12 1 1.000 - - - - - - - - zinc finger, FYVE domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-040718-109]
34. FBF1 FBF1 13 1 1.000 - - - - - - - -
35. lenep ENSDARG00000095553 11 1 1.000 - - - - - - - - lens epithelial protein [Source:ZFIN;Acc:ZDB-GENE-060130-3]
36. si:dkey-239h2.4 si:dkey-239h2.4 0 1 1.000 - - - - - - - -
37. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
38. MIER3 MIER3 114 1 1.000 - - - - - - - -
39. foxl2 61 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
40. ACTN4_2 ACTN4_2 1 1 1.000 - - - - - - - -
41. cldnd ENSDARG00000006580 17 1 1.000 - - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
42. znf652 ENSDARG00000062302 17 1 1.000 - - - - - - - - zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
43. or111-2 ENSDARG00000025658 2 1 1.000 - - - - - - - - odorant receptor, family D, subfamily 111, member 2 [Source:ZFIN;Acc:ZDB-GENE-010308-19]
44. si:ch211-208f21.2 ENSDARG00000094177 61 1 1.000 - - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
45. opcml ENSDARG00000013005 18 1 1.000 - - - - - - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
46. QDPR QDPR 11 1 1.000 - - - - - - - -
47. zswim7 ENSDARG00000067608 179 1 1.000 - - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
48. zgc:153151 ENSDARG00000069563 126 1 1.000 - - - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
49. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 1 1.000 - - - - - - - - regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
50. PCBP3 ENSDARG00000054378 17 1 1.000 - - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
51. pdia2 ENSDARG00000018263 74 1 1.000 - - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
52. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 1.000 - - - - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
53. scospondin ENSDARG00000067859 4 1 1.000 - - - - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
54. si:dkey-204f11.49p si:dkey-204f11.49p 97 1 1.000 - - - - - - - -
55. CR936465.1 CR936465.1 7 1 1.000 - - - - - - - -
56. DNAI2 DNAI2 6 1 1.000 - - - - - - - -
57. ZNF135_1 ZNF135_1 1 1 1.000 - - - - - - - -
58. fam160b1 ENSDARG00000060168 22 1 1.000 - - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
59. ddrgk1 ENSDARG00000037172 14 1 1.000 - - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
60. gnai3 ENSDARG00000030644 29 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
61. U1_29 U1_29 0 1 1.000 - - - - - - - -
62. lifra ENSDARG00000098857 11 1 1.000 - - - - - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
63. CABZ01024686.1 CABZ01024686.1 1 1 1.000 - - - - - - - -
64. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 1.000 - - - - - - - -
65. rhpn1 ENSDARG00000052454 3 1 1.000 - - - - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
66. zgc:92275 ENSDARG00000034048 9 1 1.000 - - - - - - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
67. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
68. otx5 ENSDARG00000043483 282 1 1.000 - - - - - - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
69. gh1 ENSDARG00000038185 1 1 1.000 - - - - - - - - growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
70. CU457819.2 ENSDARG00000105374 8 1 1.000 - - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
71. Mar-01 Mar-01 176 1 1.000 - - - - - - - -
72. RIMBP2_1 RIMBP2_1 57 1 1.000 - - - - - - - -
73. tctn2 ENSDARG00000035633 84 1 1.000 - - - - - - - - tectonic family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-751]
74. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1 1.000 - - - - - - - -
75. Metazoa_SRP_27 Metazoa_SRP_27 2 1 1.000 - - - - - - - -
76. si:dkey-7l6.3 ENSDARG00000094514 146 1 1.000 - - - - - - - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
77. BIN1 BIN1 11 1 1.000 - - - - - - - -
78. si:dkey-253d23.9 ENSDARG00000074820 24 1 1.000 - - - - - - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
79. si:ch211-219a15.3 ENSDARG00000087659 12 1 1.000 - - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
80. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 1.000 - - - - - - - -
81. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 1.000 - - - - - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
82. wbscr27 wbscr27 70 1 1.000 - - - - - - - -
83. si:dkey-57a22.12 si:dkey-57a22.12 23 1 1.000 - - - - - - - -
84. AL645691.4 AL645691.4 0 1 1.000 - - - - - - - -
85. vsx2 ENSDARG00000005574 102 1 1.000 - - - - - - - - visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
86. CABZ01086354.1_1 CABZ01086354.1_1 89 1 1.000 - - - - - - - -
87. ddr2b ENSDARG00000058695 7 1 1.000 - - - - - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
88. si:ch211-26b3.4 ENSDARG00000075491 50 1 1.000 - - - - - - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
89. nots ENSDARG00000099824 9 1 1.000 - - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
90. U3_10 U3_10 1 1 1.000 - - - - - - - -
91. si:ch211-225b11.4 ENSDARG00000093563 42 1 1.000 - - - - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
92. gas5 279 1 1.000 - - - - - - - - growth arrest-specific 5, transcript variant X4
93. WIPI1 ENSDARG00000040657 138 1 1.000 - - - - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
94. rx3 ENSDARG00000052893 43 1 1.000 - - - - - - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
95. cnn1a ENSDARG00000017193 6 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
96. zgc:195633_1 142 1 1.000 - - - - - - - - zgc:195633
97. si:ch211-202m22.1 ENSDARG00000094491 24 1 1.000 - - - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
98. SLITRK4 ENSDARG00000079781 54 1 1.000 - - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
99. CABZ01090303.1 CABZ01090303.1 2 1 1.000 - - - - - - - -
100. celsr2l celsr2l 1 1 1.000 - - - - - - - -

There are 1065 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA