Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gbx1

Gene Name Gene ID Reads Annotation
gbx1 ENSDARG00000071418 871 gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]










Genes with expression patterns similar to gbx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gbx1 ENSDARG00000071418 871 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
2. si:ch211-138k19.2 si:ch211-138k19.2 398 2.82 - 0.909 - - - 1.000 0.911 - -
3. itm2ca ENSDARG00000043448 1265 2.716 0.999 0.820 - - - - 0.897 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
4. stxbp1a ENSDARG00000001994 5154 2.587 0.850 0.836 - - - - 0.901 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
5. rims2a ENSDARG00000101606 1088 2.539 0.989 0.811 - - - - 0.739 - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
6. nes ENSDARG00000088805 2710 2.484 - 0.952 - - 0.726 - 0.806 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
7. CHL1 CHL1 1553 2.418 - 0.866 0.707 - - - 0.845 - -
8. rd3 ENSDARG00000031600 1085 2.414 - 0.846 - 0.798 - - 0.770 - - retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
9. sox19b ENSDARG00000040266 532 2.393 - 0.768 - 0.800 - - 0.825 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
10. CR848045.1 CR848045.1 459 2.302 - 0.714 0.704 - - - 0.884 - -
11. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 1.991 0.996 - - - - 0.995 - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
12. pcp4a ENSDARG00000053130 1024 1.968 - - - - - 0.992 0.976 - - Purkinje cell protein 4a [Source:ZFIN;Acc:ZDB-GENE-031118-105]
13. amph ENSDARG00000007663 599 1.965 - 1.000 - - - - 0.965 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
14. nova1 ENSDARG00000020178 4129 1.952 0.986 - - - - - 0.966 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
15. SV2B SV2B 208 1.952 - 1.000 - - - - 0.952 - -
16. scrt2 ENSDARG00000056175 4331 1.944 - 0.976 - - - - 0.968 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
17. CABZ01070258.1 ENSDARG00000105687 3643 1.932 - - - - - 0.989 0.943 - -
18. sv2bb ENSDARG00000060711 196 1.921 - 0.985 - - - - 0.936 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
19. MAP1A MAP1A 847 1.919 - 0.967 - - - - 0.952 - -
20. hnrnpm ENSDARG00000061735 19428 1.914 0.956 - - - - 0.958 - - - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
21. kpna2 ENSDARG00000038066 7954 1.913 0.945 - - - - 0.968 - - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
22. lhx1a ENSDARG00000014018 958 1.893 - 0.939 - - - - 0.954 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
23. scn2b ENSDARG00000101713 796 1.889 - 1.000 - - - - 0.889 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
24. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.888 0.994 - - - - - 0.894 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
25. stx1b ENSDARG00000000503 2724 1.88 - 0.918 - - - - 0.962 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
26. gng3 ENSDARG00000009553 2530 1.875 - 0.957 - - - - 0.918 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
27. lingo1a ENSDARG00000034165 179 1.872 - 0.909 - - - - 0.963 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
28. dbx2 2971 1.869 - 0.925 - - - - 0.944 - - developing brain homeobox 2
29. snap25a ENSDARG00000020609 4537 1.865 - 0.945 - - - - 0.920 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
30. sez6l2 ENSDARG00000076052 360 1.846 - 0.940 - - - - 0.906 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
31. TUSC5 TUSC5 1436 1.84 - 0.868 - - - - 0.972 - -
32. stmn2a ENSDARG00000033234 2272 1.837 - 0.900 - - - - 0.937 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
33. prdm14 ENSDARG00000045371 106 1.836 - 0.909 - - - - 0.927 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
34. CABZ01084273.1 CABZ01084273.1 16 1.836 - 0.909 - - - - 0.927 - -
35. si:dkey-122c11.4 si:dkey-122c11.4 13 1.836 - 0.909 - - - - 0.927 - -
36. arl11l arl11l 31 1.836 - 0.909 - - - - 0.927 - -
37. slc17a6a ENSDARG00000001127 337 1.836 - 0.909 - - - - 0.927 - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
38. her3 ENSDARG00000076857 131 1.836 - 0.909 - - - - 0.927 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
39. nebl ENSDARG00000021200 40 1.836 - 0.909 - - - - 0.927 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
40. tecrl2 tecrl2 11 1.836 - 0.909 - - - - 0.927 - -
41. fam163b ENSDARG00000073914 46 1.836 - 0.909 - - - - 0.927 - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
42. CABZ01066439.2 CABZ01066439.2 5 1.836 - 0.909 - - - - 0.927 - -
43. rbfox3l rbfox3l 34 1.836 - 0.909 - - - - 0.927 - -
44. C10H5orf63 C10H5orf63 17 1.836 - 0.909 - - - - 0.927 - -
45. clvs2 ENSDARG00000053122 1390 1.834 - - - - - 0.997 0.837 - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
46. trim46b ENSDARG00000058649 54 1.834 - 0.909 - - - - 0.925 - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
47. GLRA3 ENSDARG00000011066 242 1.833 - 0.899 - - - - 0.934 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
48. slc1a2b ENSDARG00000102453 3136 1.828 - 0.897 - - - - 0.931 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
49. si:ch211-152f6.6 si:ch211-152f6.6 278 1.825 - 0.959 - - - - 0.866 - -
50. FAM171A2 FAM171A2 707 1.82 - 0.859 - - - - 0.961 - -
51. slc32a1 ENSDARG00000059775 1092 1.814 - 0.861 - - - - 0.953 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
52. scn8aa ENSDARG00000005775 792 1.814 - 0.876 - - - - 0.938 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
53. slc17a6b ENSDARG00000041150 823 1.814 - 0.909 - - - - 0.905 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
54. rbfox3 rbfox3 1443 1.811 - 0.854 - - - - 0.957 - -
55. elavl3 ENSDARG00000014420 8644 1.81 0.955 - - - - - 0.855 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
56. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.809 - 0.909 - - - - 0.900 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
57. HSPA4L ENSDARG00000053544 363 1.808 - 0.872 - - - - 0.936 - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
58. neflb ENSDARG00000012426 298 1.805 - 0.909 - - - - 0.896 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
59. socs3a ENSDARG00000025428 349 1.804 - - - 0.805 - 0.999 - - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
60. CHRNB4 ENSDARG00000101677 128 1.801 - 0.959 - - - - 0.842 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
61. jag1a ENSDARG00000030289 1275 1.8 - 0.890 - - - - 0.910 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
62. LRRN3 LRRN3 261 1.795 - 0.896 - - - - 0.899 - -
63. syt4 ENSDARG00000036505 421 1.793 - 0.838 - - - - 0.955 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
64. fsd1 ENSDARG00000062017 207 1.79 - 0.868 - - - - 0.922 - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
65. dbx1a ENSDARG00000086393 3161 1.788 - 0.808 - - - - 0.980 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
66. AL935029.1 AL935029.1 514 1.787 0.997 - - - - - 0.790 - -
67. penka ENSDARG00000004869 161 1.787 - 0.937 - - - - 0.850 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
68. glrx ENSDARG00000028106 16225 1.785 0.846 - - - - 0.939 - - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
69. pcsk1nl ENSDARG00000076170 1232 1.782 - 0.896 - - - - 0.886 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
70. MAP6 MAP6 643 1.781 - 0.936 - - - - 0.845 - -
71. GJD2_1 GJD2_1 3045 1.778 - 0.909 - - - - 0.869 - -
72. cadm3 ENSDARG00000057013 1545 1.777 - 0.821 - - - - 0.956 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
73. lrrc4.1 ENSDARG00000069402 323 1.776 - 0.846 - - - - 0.930 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
74. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.768 - 0.910 - - - - 0.858 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
75. pax6a ENSDARG00000103379 3061 1.766 - 0.792 - - - - 0.974 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
76. NTRK3 NTRK3 163 1.766 - 0.909 - - - - 0.857 - -
77. fam219ab ENSDARG00000013813 591 1.766 - 0.909 - - - - 0.857 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
78. tmem91 ENSDARG00000068456 81 1.764 - 0.909 - - - - 0.855 - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
79. mir10d-1 mir10d-1 860 1.764 - 0.870 - - - - 0.894 - -
80. st8sia1_1 ENSDARG00000098221 16 1.763 - 0.909 - - - - 0.854 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
81. si:ch73-21g5.7 ENSDARG00000093156 9412 1.762 - 0.875 - - - - 0.887 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
82. nkx1.2lb ENSDARG00000099427 220 1.761 - 0.791 - - - - 0.970 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
83. hoxb3a ENSDARG00000029263 5493 1.76 0.984 - - - - - - - 0.776 homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
84. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.754 - 0.893 - - - - 0.861 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
85. rap2ip rap2ip 681 1.753 - 0.940 - - - - 0.813 - -
86. nova2 ENSDARG00000017673 7685 1.749 - 0.895 - - - - 0.854 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
87. syt11a ENSDARG00000057913 1145 1.747 - 0.936 - - - - 0.811 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
88. SLC5A7 SLC5A7 453 1.742 - 0.809 - - - - 0.933 - -
89. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 1.738 - 0.752 - - - 0.986 - - - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
90. SNAP91 ENSDARG00000098809 556 1.734 - 0.799 - - - - 0.935 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
91. vsnl1a ENSDARG00000023228 1584 1.734 - 0.849 - - - - 0.885 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
92. entpd3 ENSDARG00000035309 263 1.731 - 0.804 - - - - 0.927 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
93. KCNS3 KCNS3 82 1.731 - 0.909 - - - - 0.822 - -
94. calca ENSDARG00000056590 150 1.727 - 0.844 - - - - 0.883 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
95. slc18a3a ENSDARG00000006356 1285 1.725 - 0.829 - - - - 0.896 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
96. irx3a ENSDARG00000101076 3106 1.725 - - 0.731 - - 0.994 - - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
97. si:dkey-97l20.5 si:dkey-97l20.5 33 1.723 - 0.909 - 0.814 - - - - -
98. nadl1.1 1200 1.721 - 0.855 - - - - 0.866 - - neural adhesion molecule L1.1, transcript variant X1
99. NPPC_1 NPPC_1 11 1.718 - 0.791 - - - - 0.927 - -
100. whsc1 1701 1.718 0.998 - - 0.720 - - - - - Wolf-Hirschhorn syndrome candidate 1

There are 2067 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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