Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gata1a

Gene Name Gene ID Reads Annotation
gata1a ENSDARG00000013477, ENSDARG00000117116 902 GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]










Genes with expression patterns similar to gata1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gata1a ENSDARG00000013477, ENSDARG00000117116 902 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
2. AL935210.1 ENSDARG00000088330 24618 5.283 - - 0.854 0.871 0.871 0.949 0.885 - 0.853 hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
3. si:busm1-118j2.5 si:busm1-118j2.5 10462 5.164 - 0.806 0.853 0.880 0.834 0.907 0.884 - -
4. epb41b ENSDARG00000029019 1472 5.032 - 0.846 0.783 - 0.779 0.939 0.827 - 0.858 erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
5. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 4.321 - 0.820 0.807 0.864 - 0.955 - - 0.875 hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
6. slc4a1a ENSDARG00000012881 8972 4.288 - 0.878 0.858 0.901 - - 0.856 - 0.795 solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
7. nt5c2l1 ENSDARG00000034852 1014 4.197 - 0.709 - 0.843 - 0.921 0.902 - 0.822 5'-nucleotidase, cytosolic II, like 1 [Source:ZFIN;Acc:ZDB-GENE-031006-8]
8. cahz ENSDARG00000011166 5771 4.001 - 0.849 0.737 - 0.767 - 0.831 - 0.817 carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
9. epor_1 ENSDARG00000090834 366 3.93 - - 0.704 0.772 0.721 0.939 - - 0.794 erythropoietin receptor [Source:ZFIN;Acc:ZDB-GENE-071116-1]
10. hbz 327 3.893 - 0.704 0.740 0.884 - 0.804 0.761 - - hemoglobin subunit zeta
11. hbae3 ENSDARG00000079305 100050 3.502 - - - 0.864 0.872 0.935 - - 0.831 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
12. hbbe3 ENSDARG00000038147, ENSDARG00000109344 102871 3.405 - 0.780 0.907 0.850 0.868 - - - - hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
13. klfd klfd 625 3.267 - - - 0.900 0.784 0.857 - - 0.726
14. hbae1 14666 3.261 - - 0.761 - 0.734 0.912 0.854 - - hemoglobin, alpha embryonic 1
15. hbae1_1 37308 3.224 - 0.813 0.809 - 0.834 - - - 0.768 hemoglobin, alpha embryonic 1
16. rhd ENSDARG00000002194 269 3.199 - - - 0.782 0.752 0.916 0.749 - - Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
17. hbbe1.1 ENSDARG00000113599 64815 3.196 - 0.732 - 0.832 0.787 - - - 0.845 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
18. urod ENSDARG00000006818 856 3.144 - 0.849 0.796 0.771 0.728 - - - - uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
19. HBQ1 HBQ1 413 2.903 - - 0.768 - 0.711 - 0.711 - 0.713
20. si:dkey-25o16.2 1990 2.544 - - 0.832 - - - 0.882 - 0.830 si:dkey-25o16.2, transcript variant X1
21. hmbsb ENSDARG00000055991 3037 2.307 - - 0.827 - 0.724 - - - 0.756 hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
22. adrb3a ENSDARG00000053646 354 2.295 - 0.778 - 0.809 0.708 - - - - adrenoceptor beta 3a [Source:ZFIN;Acc:ZDB-GENE-080917-21]
23. CR385063.1 CR385063.1 590 2.251 - - - 0.744 - - 0.705 - 0.802
24. nmt1b ENSDARG00000057206 654 2.19 - - - 0.755 0.702 - 0.733 - - N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
25. rfesd ENSDARG00000058725 339 2.128 - - - 0.705 0.718 - 0.705 - - Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
26. RIN2 ENSDARG00000074589 255 1.715 - 0.822 - - - - - 0.893 - Ras and Rab interactor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-194]
27. ctdsplb ENSDARG00000062116 136 1.688 - 0.778 - - - - 0.910 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b [Source:ZFIN;Acc:ZDB-GENE-060929-488]
28. hbbe1.1_1 ENSDARG00000113599 31704 1.682 - - - 0.822 0.860 - - - - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
29. RECQL5 ENSDARG00000059556 483 1.68 - - - - - - 0.829 0.851 - RecQ helicase-like 5 [Source:ZFIN;Acc:ZDB-GENE-071214-1]
30. C12H10orf107 C12H10orf107 8 1.66 - 0.713 - - - 0.947 - - -
31. zgc:174712 zgc:174712 47 1.644 - 0.728 - - - 0.916 - - -
32. CABZ01033130.1 CABZ01033130.1 5 1.629 - 0.713 - - - 0.916 - - -
33. notchl ENSDARG00000088308 28 1.629 - 0.713 - - - 0.916 - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
34. blf ENSDARG00000043126 433 1.614 - 0.880 - - 0.734 - - - - bloody fingers [Source:ZFIN;Acc:ZDB-GENE-050721-1]
35. mterfd1 mterfd1 287 1.611 0.858 0.753 - - - - - - -
36. plac8l1 ENSDARG00000069031 161 1.609 - - 0.739 0.870 - - - - - PLAC8-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-165]
37. si:ch211-250g4.3 ENSDARG00000092945 150 1.606 - 0.854 - - - - - - 0.752 si:ch211-250g4.3 [Source:ZFIN;Acc:ZDB-GENE-060503-506]
38. med18 ENSDARG00000041237 247 1.6 - 0.761 - - - - - 0.839 - mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]
39. klf4b klf4b 533 1.58 - - 0.865 - 0.715 - - - -
40. blvrb ENSDARG00000096829 3296 1.577 - - 0.768 0.809 - - - - - biliverdin reductase B [Source:ZFIN;Acc:ZDB-GENE-030131-1516]
41. CABZ01088346.1 ENSDARG00000099362 30 1.569 - 0.713 - - - 0.856 - - -
42. slc25a37 ENSDARG00000073743 31 1.564 - 0.815 - - - - 0.749 - - solute carrier family 25 (mitochondrial iron transporter), member 37 [Source:ZFIN;Acc:ZDB-GENE-031118-202]
43. CPXM1 CPXM1 201 1.557 0.779 - - - - - - 0.778 -
44. tubb1 ENSDARG00000053066 364 1.546 - - 0.748 0.798 - - - - - tubulin, beta 1 class VI [Source:ZFIN;Acc:ZDB-GENE-110408-5]
45. si:ch73-248e21.7 ENSDARG00000096331 176 1.537 - - - - 0.799 0.738 - - - si:ch73-248e21.7 [Source:ZFIN;Acc:ZDB-GENE-120215-231]
46. zgc:173961 zgc:173961 1540 1.524 - - 0.722 0.802 - - - - -
47. APBA3 APBA3 852 1.52 0.722 0.798 - - - - - - -
48. slain2 ENSDARG00000032114 798 1.518 0.720 0.798 - - - - - - - SLAIN motif family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-251]
49. CU570976.1 ENSDARG00000097183 341 1.507 - 0.706 - 0.801 - - - - -
50. si:ch73-299h12.1 ENSDARG00000102321 233 1.502 - - - 0.771 - 0.731 - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
51. alpk3a ENSDARG00000078989 1992 1.496 - 0.720 - - - - - 0.776 - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
52. CABZ01111953.1 ENSDARG00000099747 38 1.494 - 0.713 - - - 0.781 - - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
53. coro1a ENSDARG00000054610, ENSDARG00000111327 479 1.478 - 0.713 - - - - - 0.765 - coronin, actin binding protein, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-9512]
54. btbd6b ENSDARG00000032369, ENSDARG00000114044 692 1.47 - 0.745 - - - - 0.725 - - BTB (POZ) domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-030829-65]
55. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1.462 - 0.713 - - - - 0.749 - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
56. pnpo ENSDARG00000017612, ENSDARG00000109509 570 1.461 - 0.706 - - - - - 0.755 - pyridoxamine 5'-phosphate oxidase [Source:ZFIN;Acc:ZDB-GENE-060602-2]
57. TIMP4 TIMP4 599 1.453 - - 0.714 - - - 0.739 - -
58. ap1m1 ENSDARG00000096249 227 1.452 0.722 - - - - - 0.730 - - adaptor related protein complex 1 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-110126-1]
59. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 1.436 - 0.706 - - - - - 0.730 - neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
60. ikzf1 ENSDARG00000013539 94 1.425 - - - 0.718 - - 0.707 - - IKAROS family zinc finger 1 (Ikaros) [Source:ZFIN;Acc:ZDB-GENE-980526-304]
61. grin2db ENSDARG00000070620 101 1.418 - 0.711 - 0.707 - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b [Source:ZFIN;Acc:ZDB-GENE-100920-7]
62. smyd3 ENSDARG00000058050 69 0.944 - - - - - - - 0.944 - SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]
63. vav3b ENSDARG00000073713, ENSDARG00000075962 26 0.943 - - - - - 0.943 - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
64. si:ch211-245h7.2 si:ch211-245h7.2 317 0.943 - - - - - 0.943 - - -
65. NGFR NGFR 186 0.941 - - - - - - - 0.941 -
66. mfi2 224 0.939 - - - - - 0.939 - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
67. si:ch211-251p5.3 si:ch211-251p5.3 39 0.939 - - - - - 0.939 - - -
68. atad5b ENSDARG00000101126, ENSDARG00000111647, ENSDARG00000116936 16 0.939 - - - - - 0.939 - - - ATPase family, AAA domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-030131-338]
69. slco2b1 ENSDARG00000054609 68 0.938 - - - - - 0.938 - - - solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
70. C6H21orf58 C6H21orf58 14 0.938 - - - - - 0.938 - - -
71. cd40 ENSDARG00000054968 90 0.935 - - - - - - - 0.935 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
72. bcat1 ENSDARG00000045568 39 0.93 - - - - - 0.930 - - - branched chain amino-acid transaminase 1, cytosolic [Source:ZFIN;Acc:ZDB-GENE-030131-9358]
73. frmd4bb ENSDARG00000076496 18 0.93 - - - - - - - 0.930 - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
74. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.93 - - - - - - - 0.930 - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
75. dusp5 ENSDARG00000019307, ENSDARG00000110831 476 0.93 - - - - - - - 0.930 - dual specificity phosphatase 5 [Source:ZFIN;Acc:ZDB-GENE-010625-1]
76. d2hgdh ENSDARG00000060210 362 0.928 - - - - - - - 0.928 - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
77. RNF115 ENSDARG00000062450 83 0.926 - - - - - - - 0.926 - ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
78. ASTL ASTL 24 0.925 - - - - - - - 0.925 -
79. cyp2k8 ENSDARG00000101190 69 0.925 - - - - - - - 0.925 - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
80. scarb1 ENSDARG00000101557 503 0.925 - - - - - - - 0.925 - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
81. samd11 ENSDARG00000077852 631 0.924 - 0.924 - - - - - - - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
82. traf1 ENSDARG00000069482 50 0.923 - - - - - - - 0.923 - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
83. rrp15 ENSDARG00000013478 1126 0.922 - - - - - - - 0.922 - ribosomal RNA processing 15 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5261]
84. POLRMT ENSDARG00000101220 215 0.921 - - - - - - - 0.921 - polymerase (RNA) mitochondrial (DNA directed) [Source:ZFIN;Acc:ZDB-GENE-030131-1528]
85. si:dkey-93n13.2 ENSDARG00000092816 119 0.92 - - - - - - - 0.920 - si:dkey-93n13.2 [Source:ZFIN;Acc:ZDB-GENE-091204-177]
86. crfb17 511 0.918 - - - - - - - 0.918 - cytokine receptor family member B17
87. zgc:113294 ENSDARG00000032285 132 0.918 - - - - - - - 0.918 - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
88. si:dkey-14d8.2 38 0.917 - - - - - - - 0.917 - si:dkey-14d8.2
89. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.917 - 0.917 - - - - - - - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
90. CABZ01071407.1 CABZ01071407.1 6 0.916 - - - - - 0.916 - - -
91. SYDE1 ENSDARG00000077440 4 0.916 - - - - - 0.916 - - - synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
92. CR847893.4 CR847893.4 2 0.916 - - - - - 0.916 - - -
93. cryaa ENSDARG00000053502, ENSDARG00000113469 80 0.916 - - - - - 0.916 - - - crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
94. il13 ENSDARG00000077809 8 0.916 - - - - - 0.916 - - - interleukin 13 [Source:ZFIN;Acc:ZDB-GENE-100727-2]
95. DPEP1 ENSDARG00000068181 1 0.916 - - - - - 0.916 - - - dipeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-388]
96. slc5a12 ENSDARG00000005004 15 0.916 - - - - - 0.916 - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
97. U1_41 U1_41 1 0.916 - - - - - 0.916 - - -
98. GPR35_1 GPR35_1 1 0.916 - - - - - 0.916 - - -
99. si:ch211-235f1.3 ENSDARG00000095179 27 0.916 - - - - - 0.916 - - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
100. fam169b ENSDARG00000069321 5 0.916 - - - - - 0.916 - - - family with sequence similarity 169, member B [Source:ZFIN;Acc:ZDB-GENE-050419-217]

There are 1013 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA