Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gars

Gene Name Gene ID Reads Annotation
gars ENSDARG00000059070 17015 glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]










Genes with expression patterns similar to gars

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gars ENSDARG00000059070 17015 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
2. eif4h ENSDARG00000042252 6742 3.173 - - 0.720 0.770 - 0.823 0.860 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
3. cct3 ENSDARG00000016173 15869 2.616 - 0.921 - - 0.760 - 0.935 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
4. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 2.615 - 0.925 0.828 - - - 0.862 - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
5. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 2.604 - - 0.747 - 0.929 - 0.928 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
6. eif2s1b ENSDARG00000052178 11961 2.586 0.924 0.736 - - - - 0.926 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
7. fmr1 ENSDARG00000037433 5132 2.558 - 0.882 - - 0.884 - 0.792 - - fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
8. eaf2 ENSDARG00000010432 3768 2.551 - 0.899 0.864 - - - 0.788 - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
9. myom1a ENSDARG00000061249 10230 2.513 0.914 - - - - 0.712 0.887 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
10. immt ENSDARG00000102874 3435 2.511 0.933 - - - - 0.718 0.860 - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
11. acadvl ENSDARG00000016687 5329 2.509 - 0.895 0.824 - - - 0.790 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
12. ftsjd2 ftsjd2 2694 2.491 - - 0.829 - 0.897 - 0.765 - -
13. fmnl2b ENSDARG00000075041 1744 2.477 - - 0.858 0.729 0.890 - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
14. kpna2 ENSDARG00000038066 7954 2.429 0.832 0.888 0.709 - - - - - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
15. celf1 ENSDARG00000005315 5598 2.394 - - - 0.723 - 0.833 0.838 - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
16. plcg1 ENSDARG00000038442 5324 2.344 - - - - 0.762 0.761 0.821 - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
17. tial1 ENSDARG00000009525 1856 2.341 - - 0.856 - - 0.773 0.712 - - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
18. lypla2 ENSDARG00000053656 8971 2.276 - - 0.711 0.750 - - 0.815 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
19. lrrfip2 ENSDARG00000010400 2633 2.256 - - - 0.718 - 0.727 0.811 - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
20. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 2.217 - 0.746 - - - 0.711 0.760 - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
21. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.86 - 0.938 - - - - 0.922 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
22. ddx19 ENSDARG00000005699 4602 1.84 - - - - 0.980 - 0.860 - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
23. col11a1b ENSDARG00000009014 9998 1.831 0.914 - - - - - 0.917 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
24. abcf1 ENSDARG00000031795 8635 1.807 - 0.935 - - - - 0.872 - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
25. cdv3 ENSDARG00000023028 12380 1.801 - 0.947 - - - - 0.854 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
26. sgcd ENSDARG00000098573 4980 1.798 - 0.923 - - - - 0.875 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
27. pvalb4 ENSDARG00000024433 35736 1.794 - - - - - - 0.821 - 0.973 parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
28. ubr4 ENSDARG00000009549 5565 1.792 - 0.928 - - 0.864 - - - - ubiquitin protein ligase E3 component n-recognin 4 [Source:ZFIN;Acc:ZDB-GENE-090313-341]
29. aclya ENSDARG00000099079 2324 1.788 0.893 - - - 0.895 - - - - ATP citrate lyase a [Source:ZFIN;Acc:ZDB-GENE-031113-1]
30. rhoad rhoad 8007 1.787 0.914 0.873 - - - - - - -
31. flncb ENSDARG00000018820 5595 1.785 - 0.908 - - - - 0.877 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
32. tmed10 ENSDARG00000041391, ENSDARG00000110672 23599 1.785 - - 0.793 - - - - - 0.992 transmembrane p24 trafficking protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4915]
33. mat2b ENSDARG00000012932 3146 1.783 0.903 - - - 0.880 - - - - methionine adenosyltransferase II, beta [Source:ZFIN;Acc:ZDB-GENE-030131-786]
34. hoxb3a ENSDARG00000029263 5493 1.781 0.904 - - - 0.877 - - - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
35. chd2 ENSDARG00000060687 3832 1.775 0.882 - - - 0.893 - - - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
36. rpl7l1 ENSDARG00000042864 3256 1.771 - 0.942 0.829 - - - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
37. anxa6 ENSDARG00000013335 3588 1.768 0.904 - - - - - 0.864 - - annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
38. jph1a ENSDARG00000058603 2852 1.765 0.922 - - - - - 0.843 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
39. desi2 ENSDARG00000004460 1593 1.764 - - - - 0.891 - 0.873 - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
40. COMP 2018 1.763 - 0.932 - - - - 0.831 - - cartilage oligomeric matrix protein, transcript variant X1
41. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.759 - - - - - 0.860 0.899 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
42. stm ENSDARG00000035694 1567 1.759 - - 0.861 - 0.898 - - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
43. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 1.747 - 0.857 - - 0.890 - - - - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
44. sltm ENSDARG00000052728 6234 1.746 - 0.901 0.845 - - - - - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
45. ndufb11 ENSDARG00000043467 7495 1.745 - - - - - 0.835 0.910 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
46. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.744 0.866 0.878 - - - - - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
47. eef1db ENSDARG00000030053 5185 1.737 - 0.893 - - - - 0.844 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
48. snoU83B snoU83B 4666 1.737 - 0.925 - - - - 0.812 - -
49. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.735 - 0.870 - - 0.865 - - - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
50. cilp ENSDARG00000053362 1429 1.735 0.911 - - - - - 0.824 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
51. wu:fb12e11 wu:fb12e11 2332 1.733 - 0.868 0.865 - - - - - -
52. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 1.731 - 0.862 - - - - 0.869 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
53. TMEM261 TMEM261 6529 1.728 - - - - - - 0.734 - 0.994
54. col4a5 ENSDARG00000052063 19251 1.724 0.731 - - - - - - - 0.993 collagen, type IV, alpha 5 (Alport syndrome) [Source:ZFIN;Acc:ZDB-GENE-030131-2281]
55. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.722 - - - - 0.806 - 0.916 - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
56. cox7c ENSDARG00000104537 12169 1.72 - - - - - 0.803 0.917 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
57. zgc:193541 ENSDARG00000092873 21276 1.719 - - - - - 0.824 0.895 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
58. ppp3r1b ENSDARG00000069360 2814 1.718 0.873 - - - - - 0.845 - - protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b [Source:ZFIN;Acc:ZDB-GENE-040912-18]
59. PSIP1 PSIP1 5252 1.717 - - - - 0.868 - 0.849 - -
60. ttc3 ENSDARG00000086075 2157 1.716 - 0.876 0.840 - - - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
61. mrpl37 ENSDARG00000062916 1600 1.712 - - 0.863 - - - 0.849 - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
62. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 1.71 - - - - 0.895 - 0.815 - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
63. sipa1l2 ENSDARG00000061640 4545 1.708 - - 0.835 - 0.873 - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
64. ptcd3 ENSDARG00000103856 2107 1.707 - 0.886 - - - - 0.821 - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
65. safb ENSDARG00000020467 5608 1.705 - - 0.833 - 0.872 - - - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
66. nmrk2 ENSDARG00000067848 10293 1.705 0.833 - - - - - 0.872 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
67. tmeff1b ENSDARG00000056740 11253 1.704 - - - 0.782 0.922 - - - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
68. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.703 - 0.855 - - - - 0.848 - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
69. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 1.702 - 0.886 - - - - 0.816 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
70. ndufs6 ENSDARG00000056583 7220 1.701 - - - - - 0.799 0.902 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
71. clstn1 ENSDARG00000031720 5286 1.697 - - 0.772 - 0.925 - - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
72. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.697 - - - - - 0.771 0.926 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
73. tmem182 tmem182 12589 1.694 0.839 - - - - - 0.855 - -
74. poc1bl ENSDARG00000012745 2451 1.692 0.869 - 0.823 - - - - - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
75. atp5e 14858 1.691 - - - - - 0.767 0.924 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
76. cul4b ENSDARG00000060510 6053 1.689 - 0.914 0.775 - - - - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
77. USMG5 USMG5 10356 1.689 - - - - 0.806 - 0.883 - -
78. eprs ENSDARG00000060494 4729 1.689 - - 0.804 - - - 0.885 - - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
79. coq9 ENSDARG00000023583, ENSDARG00000110255, ENSDARG00000111424 6051 1.689 - - 0.785 - - - 0.904 - - coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37]
80. CABZ01076275.1 ENSDARG00000100753 5137 1.683 - - - - 0.892 - 0.791 - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
81. EEF1E1 ENSDARG00000071774 3806 1.683 - - 0.834 - - - 0.849 - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
82. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.683 - - 0.851 - - - 0.832 - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
83. cox5ab ENSDARG00000099663 5689 1.682 - 0.894 - - - - 0.788 - - cytochrome c oxidase subunit 5Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5162]
84. mccc2 ENSDARG00000017571 5635 1.682 - - 0.836 - - - 0.846 - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
85. trim63 trim63 2437 1.68 - 0.906 - - - - 0.774 - -
86. rmnd5b ENSDARG00000043359 3054 1.679 - - - - 0.955 - 0.724 - - required for meiotic nuclear division 5 homolog B [Source:ZFIN;Acc:ZDB-GENE-040426-1744]
87. cfl1 ENSDARG00000021124 78399 1.679 - - - - - - 0.714 - 0.965 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
88. hnrnph1l ENSDARG00000005551 8727 1.678 0.912 - 0.766 - - - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
89. pmp22b ENSDARG00000060457 20406 1.677 0.824 - - - - - 0.853 - - peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
90. rpf1 ENSDARG00000005738, ENSDARG00000112347, ENSDARG00000115372 3522 1.677 - 0.925 - - - 0.752 - - - ribosome production factor 1 homolog [Source:ZFIN;Acc:ZDB-GENE-040625-177]
91. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 1.676 - - - - 0.894 - 0.782 - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
92. TIMM21 ENSDARG00000071594 722 1.675 - - - - 0.897 - 0.778 - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
93. ZNF609 ZNF609 2176 1.673 - - - - 0.925 - 0.748 - -
94. ammecr1 ENSDARG00000012892 14475 1.67 0.884 - - - - 0.786 - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
95. cers5 ENSDARG00000002365 2540 1.669 0.783 - - - 0.886 - - - - ceramide synthase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1740]
96. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.668 - - - - 0.832 - 0.836 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
97. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 1.667 - - 0.861 - - - 0.806 - - sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
98. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.667 - - - - 0.803 - 0.864 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
99. hadhab ENSDARG00000060594 3664 1.667 - - 0.823 - - - 0.844 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
100. phex ENSDARG00000062363 1413 1.666 0.854 - - - - - 0.812 - - phosphate regulating endopeptidase homolog, X-linked [Source:ZFIN;Acc:ZDB-GENE-030103-2]

There are 2059 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA