Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gapdh

Gene Name Gene ID Reads Annotation
gapdh ENSDARG00000043457 68684 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]










Genes with expression patterns similar to gapdh

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gapdh ENSDARG00000043457 68684 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
2. aldoab ENSDARG00000034470 88942 4.694 0.734 - 0.745 0.758 0.751 - - 0.804 0.902 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
3. tgm2a ENSDARG00000070157 4516 4.488 0.732 0.739 0.816 0.724 0.759 0.718 - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
4. tpma ENSDARG00000033683 752432 4.159 0.718 - 0.883 0.876 0.780 - - 0.902 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
5. mylpfb ENSDARG00000002589 70167 4.115 - - 0.850 0.877 0.785 - - 0.853 0.750 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
6. casq2 ENSDARG00000008982 21802 4.033 0.734 - 0.839 0.841 0.829 - - 0.790 - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
7. ttnb ttnb 73721 4.026 0.729 - 0.802 0.928 0.808 - - 0.759 -
8. CR847973.1 ENSDARG00000115516 8754 4.023 0.813 - 0.811 0.843 0.804 - - 0.752 -
9. srl ENSDARG00000104587 11126 4.009 0.805 - 0.743 0.891 0.812 - - 0.758 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
10. tnni2a.4 ENSDARG00000029069 122344 4.003 0.758 - 0.779 0.772 0.844 - - 0.850 - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
11. SYNPO2L SYNPO2L 6697 3.985 0.733 - 0.801 0.880 - 0.734 - 0.837 -
12. ckmb ENSDARG00000040565 505935 3.984 0.706 - 0.815 0.902 0.801 - - 0.760 - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
13. atp2a1 ENSDARG00000020574 291561 3.464 - - 0.856 0.883 0.845 - - 0.880 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
14. tpi1b ENSDARG00000040988, ENSDARG00000113061 29752 3.404 - - 0.860 0.862 0.904 - - 0.778 - triosephosphate isomerase 1b [Source:ZFIN;Acc:ZDB-GENE-020416-4]
15. si:ch211-226o13.2 84923 3.281 - - 0.857 0.893 0.752 - - 0.779 - si:ch211-226o13.2
16. pgam2 ENSDARG00000057571 23387 3.255 - - - 0.897 0.761 - - 0.795 0.802 phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
17. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 3.238 0.765 - 0.850 0.867 0.756 - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
18. tnnt3a ENSDARG00000030270 112506 3.235 - - 0.812 0.860 0.830 - - 0.733 - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
19. acta1b ENSDARG00000055618 195597 3.235 0.716 - 0.854 - 0.755 - - 0.910 - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
20. tmod4 ENSDARG00000020890 17436 3.234 - - 0.818 0.903 0.769 - - 0.744 - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
21. mylz3 ENSDARG00000017441 303597 3.228 - - 0.794 0.896 0.804 - - 0.734 - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
22. tmem38a ENSDARG00000024047 41883 3.227 - - 0.832 0.848 0.737 - - 0.810 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
23. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 3.214 - - 0.781 0.844 0.825 - - 0.764 - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
24. desma ENSDARG00000058656 30292 3.199 0.720 - 0.847 0.839 0.793 - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
25. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.18 0.737 - 0.779 0.901 - 0.763 - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
26. myhz1.3 ENSDARG00000067997 155509 3.178 0.753 - 0.816 0.811 0.798 - - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
27. mybpc2b ENSDARG00000021265 9618 3.172 0.747 - 0.772 0.805 - - - 0.848 - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
28. myl1 ENSDARG00000014196 98943 3.163 - - 0.820 0.744 0.856 - - 0.743 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
29. ank1 ank1 5209 3.159 0.728 - 0.778 0.782 - - - 0.871 -
30. actc1b ENSDARG00000099197 324665 3.145 - - 0.841 0.737 0.842 - - 0.725 - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
31. ckma ENSDARG00000035327, ENSDARG00000114671 418792 3.143 - - 0.786 0.836 0.762 - - 0.759 - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
32. CR354540.2 ENSDARG00000117517 18452 3.131 0.741 - 0.819 0.840 0.731 - - - -
33. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 3.121 0.736 - 0.708 0.877 - - - 0.800 - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
34. pkmb ENSDARG00000099860 25094 3.091 - 0.742 - 0.776 0.727 - - 0.846 - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
35. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 3.09 0.720 - 0.755 - 0.743 - - 0.872 - parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
36. sar1ab ENSDARG00000033320 3984 3.089 - - 0.751 0.837 0.740 - - 0.761 - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
37. ttna ttna 101197 3.068 0.706 - 0.825 - 0.789 - - 0.748 -
38. tmem182 tmem182 12589 3.052 - - 0.745 0.768 - 0.756 - 0.783 -
39. tnnt2d ENSDARG00000002988 7590 3.05 - - 0.732 0.843 0.705 - - 0.770 - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
40. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 3.047 - - 0.770 0.755 0.787 - - 0.735 - myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
41. SYNPO2 SYNPO2 7382 3.029 - - 0.766 0.779 0.712 - - 0.772 -
42. SPEG SPEG 4017 3.026 0.706 0.737 0.772 0.811 - - - - -
43. klhl31 ENSDARG00000039066 13656 3.003 - - 0.769 0.759 0.701 - - 0.774 - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
44. PTPLA PTPLA 4044 3.002 - - 0.717 0.755 - 0.722 - 0.808 -
45. nexn ENSDARG00000057317 10972 2.944 0.721 - 0.755 0.728 - 0.740 - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
46. tnnt3b ENSDARG00000068457 101827 2.544 - - 0.833 0.849 - - - 0.862 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
47. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 2.516 - - 0.830 0.865 - - - 0.821 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
48. myoz1b ENSDARG00000071445 13381 2.468 - - 0.776 0.866 - - - 0.826 - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
49. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 2.445 - - 0.825 - 0.844 - - 0.776 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
50. mat1a ENSDARG00000039605, ENSDARG00000115975 15561 2.443 - - 0.790 0.872 0.781 - - - - methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
51. myom1a ENSDARG00000061249 10230 2.416 - - 0.801 - - 0.734 - 0.881 - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
52. rtn2a ENSDARG00000016088 12184 2.405 - - 0.731 0.826 - - - 0.848 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
53. pvalb4 ENSDARG00000024433 35736 2.394 - - 0.827 0.840 0.727 - - - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
54. ak1 ENSDARG00000001950 26964 2.39 0.726 - - 0.856 0.808 - - - - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
55. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.381 - - 0.815 - 0.739 - - 0.827 - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
56. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.362 - - - 0.835 - 0.709 - 0.818 - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
57. jph1b ENSDARG00000038826 7416 2.344 - - 0.774 0.819 - - - 0.751 - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
58. actn3b ENSDARG00000001431 15747 2.331 0.723 - 0.806 0.802 - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
59. pygma ENSDARG00000055518 15972 2.323 0.715 - - - 0.769 - - 0.839 - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
60. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.323 - - 0.737 0.769 - - - 0.817 - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
61. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 2.317 - - - 0.741 - 0.729 - 0.847 - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
62. rbp4 ENSDARG00000101199 59390 2.317 - - 0.820 0.710 0.787 - - - - retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
63. MYOM2_1 MYOM2_1 4054 2.312 - - 0.714 0.768 - - - 0.830 -
64. atp1b1b ENSDARG00000076833 10324 2.297 - - 0.801 0.748 0.748 - - - - ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]
65. nt5c3a ENSDARG00000058597 14299 2.292 - - 0.807 0.710 0.775 - - - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
66. jph1a ENSDARG00000058603 2852 2.279 - - 0.767 0.784 - - - 0.728 - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
67. cav3 ENSDARG00000024141 14906 2.274 - - - 0.836 0.720 0.718 - - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
68. hhatlb ENSDARG00000005139 6674 2.269 - - 0.791 - - 0.703 - 0.775 - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
69. BX294434.1 ENSDARG00000061272 6493 2.264 - - 0.703 0.812 - - - 0.749 - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
70. eef2l2 ENSDARG00000035256 6815 2.251 - - 0.755 0.780 0.716 - - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
71. tnni1al 8272 2.251 - - 0.726 0.778 - - - 0.747 - troponin I, skeletal, slow like, transcript variant X1
72. suclg1 ENSDARG00000052712 17570 2.248 - - 0.733 - 0.764 - - 0.751 - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
73. EHBP1L1 EHBP1L1 2500 2.217 - - 0.724 0.764 0.729 - - - -
74. ptrfa ptrfa 4363 2.184 0.707 - 0.739 0.738 - - - - -
75. cacna2d1a ENSDARG00000014804 1924 2.178 0.712 - - 0.753 - - - 0.713 - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
76. si:ch211-255p10.3 ENSDARG00000096616 8336 2.174 - - 0.707 - - 0.734 - 0.733 - si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
77. si:ch211-156j16.1 ENSDARG00000092035 7441 2.166 0.712 - 0.734 0.720 - - - - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
78. murcb murcb 13655 1.644 - - - 0.917 - - - 0.727 -
79. hhatla ENSDARG00000039051 6598 1.632 - - 0.808 0.824 - - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
80. ldb3b ENSDARG00000099974 33615 1.628 - - 0.849 - - - - 0.779 - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
81. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.614 - - 0.788 0.826 - - - - -
82. calm1b ENSDARG00000034187 13158 1.609 0.751 - 0.858 - - - - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
83. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 1.595 - - - 0.758 - - - 0.837 - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
84. jph2 ENSDARG00000028625 6706 1.586 - - - 0.798 - - - 0.788 - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
85. apobec2a ENSDARG00000018881 4790 1.581 - - - 0.788 - - - 0.793 - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
86. ca2 ENSDARG00000014488 10141 1.572 - - 0.790 0.782 - - - - - carbonic anhydrase II [Source:ZFIN;Acc:ZDB-GENE-031219-5]
87. NRAP ENSDARG00000009341 3565 1.566 - - 0.732 0.834 - - - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
88. cfl2 ENSDARG00000014106 8051 1.563 - - 0.738 0.825 - - - - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
89. mt2 ENSDARG00000041623, ENSDARG00000113583 15333 1.559 - - 0.761 0.798 - - - - - metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
90. APOA4 APOA4 20822 1.558 - - 0.802 - 0.756 - - - -
91. prx ENSDARG00000017246 6183 1.558 - - 0.723 0.835 - - - - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
92. si:dkey-33i11.4 ENSDARG00000099117 8342 1.557 - - - 0.728 0.829 - - - - si:dkey-33i11.4 [Source:ZFIN;Acc:ZDB-GENE-030131-33]
93. murca murca 6614 1.556 0.780 - - 0.776 - - - - -
94. vcl vcl 6667 1.548 - - 0.815 - 0.733 - - - -
95. xirp2a ENSDARG00000071113 7113 1.538 0.759 - - - 0.779 - - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
96. mybpc3 ENSDARG00000011615 7271 1.537 - - 0.750 - - - - 0.787 - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
97. zgc:158296 ENSDARG00000070923 3935 1.533 - - 0.785 0.748 - - - - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
98. rtn2b ENSDARG00000057027 1391 1.531 - - - 0.789 - - - 0.742 - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
99. eno3 ENSDARG00000039007 11355 1.523 - - 0.715 0.808 - - - - - enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
100. myoz2a ENSDARG00000012311 1373 1.519 - - 0.744 0.775 - - - - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]

There are 246 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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