Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gap43

Gene Name Gene ID Reads Annotation
gap43 ENSDARG00000099744 4114 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]










Genes with expression patterns similar to gap43

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gap43 ENSDARG00000099744 4114 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
2. tuba1c ENSDARG00000055216 8384 5.434 0.912 - - 0.988 - 0.982 0.965 0.723 0.864 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
3. AGO1 ENSDARG00000092644 4521 5.112 0.881 0.754 - 0.991 - 0.850 0.933 - 0.703 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
4. si:ch211-11c15.3 si:ch211-11c15.3 1279 5.08 0.836 0.754 - - - 0.975 0.905 0.758 0.852
5. mllt11 ENSDARG00000071026 2518 5.046 0.925 0.718 - - - 0.963 0.931 0.720 0.789 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
6. rtn1b ENSDARG00000021143 1682 4.928 0.832 0.756 - - - 0.943 0.891 0.729 0.777 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
7. tox ENSDARG00000032317 9126 4.435 0.803 - - 0.987 - 0.893 0.922 - 0.830 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
8. dpysl3 ENSDARG00000002587 4381 4.375 0.955 0.751 - - - 0.915 0.953 - 0.801 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
9. scrt2 ENSDARG00000056175 4331 4.334 0.900 0.769 - - - 0.952 0.910 0.803 - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
10. st18 663 4.303 - 0.812 - - - 0.940 0.911 0.803 0.837 suppression of tumorigenicity 18, zinc finger
11. nbeaa ENSDARG00000070080 862 4.281 0.845 - - - - 0.878 0.950 0.778 0.830 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
12. tuba2 ENSDARG00000045014 1490 4.253 0.833 - - - - 0.910 0.878 0.764 0.868 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
13. dpysl5a ENSDARG00000011141 1827 4.249 0.743 0.753 - - - 0.946 0.950 - 0.857 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
14. nadl1.1 1200 4.236 0.823 0.782 - - - 0.922 0.925 - 0.784 neural adhesion molecule L1.1, transcript variant X1
15. gnao1a ENSDARG00000016676 8184 4.23 0.898 0.768 - - - - 0.967 0.833 0.764 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
16. rbfox3 rbfox3 1443 4.206 0.955 0.727 0.710 - - 0.879 0.935 - -
17. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 4.195 0.847 0.725 - - - 0.852 0.940 - 0.831 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
18. Sep-03 Sep-03 1124 4.154 0.737 0.760 - - - 0.948 0.844 - 0.865
19. si:ch73-21g5.7 ENSDARG00000093156 9412 4.144 0.741 0.804 - - - 0.909 0.972 - 0.718 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
20. fez1 ENSDARG00000023174 701 4.127 0.904 - - - - 0.867 0.857 0.707 0.792 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
21. myt1b ENSDARG00000102879 5411 4.012 0.704 0.706 - - - 0.942 0.953 - 0.707 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
22. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 3.917 0.737 - - - - 0.805 0.873 0.751 0.751 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
23. stmn2a ENSDARG00000033234 2272 3.756 0.964 0.861 - - - 0.954 0.977 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
24. DACT3_1 DACT3_1 1235 3.733 0.824 - - - - 0.801 0.705 0.702 0.701
25. snap25a ENSDARG00000020609 4537 3.719 0.970 0.873 - - - 0.955 0.921 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
26. stx1b ENSDARG00000000503 2724 3.618 0.896 0.825 - - - 0.943 0.954 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
27. amph ENSDARG00000007663 599 3.614 0.968 0.815 - - - 0.894 0.937 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
28. CRIP2 ENSDARG00000070670 323 3.614 0.733 - - - - 0.707 0.736 0.728 0.710 cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
29. scn8aa ENSDARG00000005775 792 3.607 0.923 0.795 - - - 0.962 0.927 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
30. TUBB8P7_1 TUBB8P7_1 2722 3.606 0.938 0.807 - - - 0.950 0.911 - -
31. TUSC5 TUSC5 1436 3.606 0.965 0.818 - - - 0.915 0.908 - -
32. nova2 ENSDARG00000017673 7685 3.603 0.824 0.917 - - - 0.912 0.950 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
33. pcdh1gc5 ENSDARG00000104826 10052 3.595 0.845 0.822 - - - 0.976 0.952 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
34. stmn2b ENSDARG00000070537 1586 3.576 0.886 0.843 - - - 0.977 0.870 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
35. MAP1A MAP1A 847 3.573 0.909 0.793 - - - 0.965 0.906 - -
36. mapk12b ENSDARG00000006409 2246 3.57 0.889 0.820 - - - 0.901 0.960 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
37. cadm3 ENSDARG00000057013 1545 3.567 0.916 - - - - 0.974 0.881 - 0.796 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
38. syt11a ENSDARG00000057913 1145 3.556 0.877 0.787 - - - 0.961 0.931 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
39. lhx5 ENSDARG00000057936 785 3.552 0.946 - - - - 0.924 0.899 0.783 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
40. slc32a1 ENSDARG00000059775 1092 3.549 0.875 0.828 - - - 0.920 0.926 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
41. atp6v0cb ENSDARG00000036577 3472 3.542 0.796 - - - - 0.956 0.958 - 0.832 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
42. ZFHX3 ENSDARG00000103057 7759 3.538 0.868 - - - - 0.952 0.933 0.785 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
43. slc1a2b ENSDARG00000102453 3136 3.531 0.939 0.716 - - - 0.954 0.922 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
44. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 3.528 0.957 0.718 - - - 0.940 0.913 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
45. adam23a ENSDARG00000062323 580 3.523 0.895 0.825 - - - 0.888 0.915 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
46. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.522 0.983 0.707 - - - 0.896 0.936 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
47. slc1a3a ENSDARG00000104431 9888 3.52 0.937 0.703 - - - 0.978 0.902 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
48. atp2b3b ENSDARG00000023445 1424 3.515 0.903 0.811 - - - 0.912 0.889 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
49. tmem35 ENSDARG00000052567 5685 3.512 0.915 - - - - 0.821 0.926 - 0.850 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
50. aplp1 ENSDARG00000098368 2317 3.508 0.930 0.768 - - - 0.941 - - 0.869 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
51. nrn1a ENSDARG00000071860 1311 3.503 0.905 0.726 - - - 0.960 0.912 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
52. zic4 ENSDARG00000031307 1228 3.499 0.880 0.821 - - - 0.964 0.834 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
53. adcyap1b ENSDARG00000027740 1539 3.493 0.974 - - - - 0.948 0.836 0.735 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
54. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 3.486 0.912 0.707 - - - 0.910 0.957 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
55. SV2B SV2B 208 3.484 0.892 0.815 - - - 0.903 0.874 - -
56. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 3.48 0.910 0.738 - - - 0.968 0.864 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
57. ndrg4 ENSDARG00000103937 1234 3.475 0.744 - - - - 0.973 0.912 - 0.846 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
58. hmp19 2554 3.473 0.711 - - - - 0.961 0.918 - 0.883 HMP19 protein
59. ELOVL4 ELOVL4 3026 3.466 0.940 0.808 - - - - 0.871 - 0.847
60. dnajc5aa ENSDARG00000042948 2885 3.465 0.864 - - - - 0.881 0.942 - 0.778 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
61. pcsk1nl ENSDARG00000076170 1232 3.46 0.778 0.817 - - - 0.930 0.935 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
62. sh3gl2 sh3gl2 1305 3.458 0.809 0.787 - - - 0.940 0.922 - -
63. negr1 ENSDARG00000021607 1051 3.454 0.909 - - - - 0.842 0.894 - 0.809 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
64. zic1 ENSDARG00000015567 2520 3.446 0.952 0.717 - - - 0.901 0.876 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
65. SPOCK1 ENSDARG00000074644 794 3.438 0.862 - - - - 0.873 0.955 - 0.748 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
66. C7H4orf48 C7H4orf48 1455 3.436 0.782 - - - - 0.951 0.891 0.812 -
67. nes ENSDARG00000088805 2710 3.433 0.795 0.825 - - - 0.870 0.943 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
68. vsnl1a ENSDARG00000023228 1584 3.432 0.803 0.825 - - - 0.959 0.845 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
69. rusc1 ENSDARG00000078125 617 3.421 0.908 - - - - 0.893 0.909 0.711 - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
70. add2 ENSDARG00000074581 1402 3.409 0.785 - - - - 0.961 0.911 - 0.752 adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
71. MAP6 MAP6 643 3.398 0.897 0.769 - - - 0.818 0.914 - -
72. slc17a6b ENSDARG00000041150 823 3.397 0.750 - - - - 0.915 0.934 - 0.798 solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
73. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 3.392 0.801 - - - - 0.960 0.895 - 0.736 neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
74. nrxn2a ENSDARG00000061454 291 3.382 0.889 - - - - 0.800 0.861 - 0.832 neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
75. hmgb3a ENSDARG00000056725 15668 3.381 0.829 - - - - 0.908 0.865 - 0.779 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
76. elavl4 ENSDARG00000045639 998 3.38 0.887 - - - - 0.758 0.932 - 0.803 ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
77. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 3.376 0.864 0.723 - - - 0.964 0.825 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
78. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 3.374 0.779 - - - - - 0.946 0.752 0.897 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
79. clvs2 ENSDARG00000053122 1390 3.369 0.848 - - - - - 0.949 0.768 0.804 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
80. atp1a3a ENSDARG00000018259 5393 3.367 0.795 0.829 - - - 0.861 - 0.882 - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
81. gng3 ENSDARG00000009553 2530 3.356 0.904 0.778 - - - 0.719 0.955 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
82. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 3.353 - 0.818 - - - 0.914 0.893 - 0.728 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
83. sox2 ENSDARG00000070913 2763 3.329 0.812 0.822 - - - 0.777 0.918 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
84. jag1a ENSDARG00000030289 1275 3.325 0.823 0.831 - - - 0.765 0.906 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
85. dbx2 2971 3.324 0.838 0.759 - - - 0.777 0.950 - - developing brain homeobox 2
86. lhx1a ENSDARG00000014018 958 3.318 0.860 - - - - 0.813 0.881 - 0.764 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
87. ARHGAP22 ENSDARG00000076434 1406 3.316 0.852 0.823 - - - 0.850 - - 0.791 Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
88. pax6a ENSDARG00000103379 3061 3.309 0.725 0.734 - - - 0.925 0.925 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
89. CABZ01111990.1 CABZ01111990.1 4374 3.308 0.861 - - - - 0.797 0.949 0.701 -
90. hnrnpub ENSDARG00000004735 16496 3.305 0.746 - - - - 0.848 0.855 - 0.856 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
91. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 3.304 - - - - - 0.894 0.885 0.791 0.734 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
92. sox21b ENSDARG00000008540 1460 3.302 0.845 0.763 - - - - 0.963 0.731 - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
93. cd99l2 ENSDARG00000056722 5036 3.299 0.750 0.829 - - - 0.898 0.822 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
94. adarb1a ENSDARG00000041609 476 3.299 0.803 - - - - 0.821 0.952 - 0.723 adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
95. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 3.297 0.704 0.799 - - - 0.892 0.902 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
96. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.292 - 0.766 - - - 0.955 0.854 - 0.717 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
97. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 3.29 - - - - - 0.846 0.868 0.749 0.827 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
98. CHL1 CHL1 1553 3.287 0.747 0.807 - - - 0.837 0.896 - -
99. scn2b ENSDARG00000101713 796 3.286 0.832 0.815 - - - 0.709 0.930 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
100. cspg5a ENSDARG00000069981 1699 3.285 0.877 0.722 - - - 0.753 0.933 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]

There are 2348 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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