Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gabra1

Gene Name Gene ID Reads Annotation
gabra1 ENSDARG00000068989 581 gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-061013-194]










Genes with expression patterns similar to gabra1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gabra1 ENSDARG00000068989 581 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-061013-194]
2. reep2 ENSDARG00000031382, ENSDARG00000112622 563 1.63 - - - - - - 0.873 0.757 - receptor accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-125]
3. AP5B1 ENSDARG00000078805 62 1.619 - - - - - 0.703 0.916 - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
4. dscama ENSDARG00000024865 75 1.597 - - - - - 0.701 0.896 - - Down syndrome cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-050310-7]
5. CSGALNACT1 CSGALNACT1 116 1.525 - - 0.773 - - - - - 0.752
6. ogfrl1 ENSDARG00000061223 64 1.514 0.811 - - - - 0.703 - - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
7. zgc:172079 ENSDARG00000056762, ENSDARG00000077644, ENSDARG00000105644 102 1.502 0.747 - - - - - 0.755 - - zgc:172079 [Source:ZFIN;Acc:ZDB-GENE-080204-103]
8. pagr1 ENSDARG00000076966 1430 1.445 - - - - - 0.714 0.731 - - PAXIP1 associated glutamate-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4801]
9. efr3a_1 ENSDARG00000005163, ENSDARG00000115083 571 1.421 - - - - - - 0.703 - 0.718 EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
10. kcnh7 ENSDARG00000062687 172 0.95 - - - - - - 0.950 - - potassium channel, voltage gated eag related subfamily H, member 7 [Source:ZFIN;Acc:ZDB-GENE-120214-39]
11. raver2 ENSDARG00000075034 290 0.945 - - - - - - 0.945 - - ribonucleoprotein, PTB-binding 2 [Source:ZFIN;Acc:ZDB-GENE-090713-1]
12. cntn1b ENSDARG00000045685 159 0.938 - - - - - - 0.938 - - contactin 1b [Source:ZFIN;Acc:ZDB-GENE-041210-236]
13. fosb ENSDARG00000055751 170 0.932 - - - - - - 0.932 - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
14. scn3b ENSDARG00000062359 242 0.929 - - - - - - 0.929 - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
15. ndufb7 ENSDARG00000033789 5898 0.929 - - - - - - - 0.929 - NADH:ubiquinone oxidoreductase subunit B7 [Source:ZFIN;Acc:ZDB-GENE-040426-1886]
16. CDH8 172 0.928 - - - - - - 0.928 - - cadherin 8
17. rasl12 ENSDARG00000002701 66 0.924 - - - - - - 0.924 - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
18. gfm2 ENSDARG00000005561 302 0.923 - - - - - - 0.923 - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
19. sirt3 ENSDARG00000035819 101 0.923 - - - - - - 0.923 - - sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]
20. cadpsa ENSDARG00000043661 160 0.923 - - - - - - 0.923 - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
21. si:rp71-36a1.5_1 ENSDARG00000077252, ENSDARG00000090882 93 0.922 - - - - - - 0.922 - - si:rp71-36a1.5 [Source:ZFIN;Acc:ZDB-GENE-091204-428]
22. si:dkey-222l20.1 si:dkey-222l20.1 375 0.921 - - - - - - 0.921 - -
23. wdr47a ENSDARG00000078136 522 0.916 - - - - - - 0.916 - - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
24. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 0.916 - - - - - - 0.916 - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
25. CABZ01112521.1 CABZ01112521.1 83 0.915 - - - - - - 0.915 - -
26. nlgn4a 102 0.914 - - - - - - 0.914 - - neuroligin 4a, transcript variant X1
27. HERC4 ENSDARG00000059936 369 0.914 - - - - - - 0.914 - - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
28. cbln2a ENSDARG00000074601 12 0.914 - - - - - - 0.914 - - cerebellin 2a precursor [Source:ZFIN;Acc:ZDB-GENE-070912-591]
29. kcnk10b ENSDARG00000045956 43 0.907 - - - - - - 0.907 - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
30. tcp11l1 ENSDARG00000031890 257 0.907 - - - - - 0.907 - - - t-complex 11, testis-specific-like 1 [Source:ZFIN;Acc:ZDB-GENE-050327-11]
31. CCDC34 CCDC34 313 0.905 - - - - - - 0.905 - -
32. hic1 ENSDARG00000055493 219 0.903 0.903 - - - - - - - - hypermethylated in cancer 1 [Source:ZFIN;Acc:ZDB-GENE-040713-2]
33. zbtb14 ENSDARG00000098273 36 0.902 - - - - - - 0.902 - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
34. fasn ENSDARG00000087657 99 0.902 0.902 - - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
35. HHIPL2 ENSDARG00000060008 162 0.901 - - - - - - 0.901 - - HHIP-like 2 [Source:ZFIN;Acc:ZDB-GENE-131120-145]
36. PTP4A2 PTP4A2 185 0.9 - - - - - 0.900 - - -
37. arhgef12b ENSDARG00000100913 1358 0.9 - - - - - - 0.900 - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
38. usp9 ENSDARG00000013708 9057 0.899 - - - - - - - 0.899 - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
39. si:zfos-364h11.1 99 0.899 - - - - - - 0.899 - - si:zfos-364h11.1, transcript variant X4
40. PRRT4 ENSDARG00000088343 36 0.898 - - - - - - 0.898 - - proline-rich transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-140106-210]
41. mrap ENSDARG00000091992 9 0.898 - - - - - - 0.898 - - melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
42. dgat1b ENSDARG00000054914 119 0.898 - - - - - - 0.898 - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
43. SHF SHF 92 0.893 - - - - - - 0.893 - -
44. arpc5lb ENSDARG00000035433 726 0.893 - - - - - - 0.893 - - actin related protein 2/3 complex, subunit 5-like, b [Source:ZFIN;Acc:ZDB-GENE-060531-161]
45. egln3 ENSDARG00000032553 280 0.891 - - - - - - 0.891 - - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
46. cyp27a1.4 ENSDARG00000055159 47 0.891 - - - - - - 0.891 - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
47. AL954676.2 AL954676.2 50 0.889 - - - - - - 0.889 - -
48. BX936303.1 ENSDARG00000103105 26 0.889 - - - - - - 0.889 - -
49. gas8 ENSDARG00000101431 140 0.883 - - - - - - 0.883 - - growth arrest-specific 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1980]
50. si:ch211-113a14.14_2 si:ch211-113a14.14_2 156 0.883 - - - - - - 0.883 - -
51. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 0.882 - - - - - - 0.882 - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
52. satb1a ENSDARG00000057649 250 0.88 - - - - - - 0.880 - - SATB homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-031010-36]
53. FHOD3 FHOD3 422 0.88 - - - - - - 0.880 - -
54. AL929092.1 ENSDARG00000092217 50 0.88 - - - - - - 0.880 - -
55. otx5 ENSDARG00000043483 282 0.878 - - - - - - 0.878 - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
56. zgc:114046 ENSDARG00000091728 68 0.877 - - - - - - 0.877 - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
57. usp33 ENSDARG00000016163 651 0.877 - - - - - - 0.877 - - ubiquitin specific peptidase 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2323]
58. ephx1 ENSDARG00000042854 161 0.876 - - - - - - 0.876 - - epoxide hydrolase 1, microsomal (xenobiotic) [Source:ZFIN;Acc:ZDB-GENE-040426-913]
59. dvl3a ENSDARG00000015707 1132 0.876 - - - - - - 0.876 - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
60. HEATR2 HEATR2 6 0.874 - - - - - - 0.874 - -
61. dlx6a ENSDARG00000042291 185 0.874 - - - - - - 0.874 - - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
62. CABZ01054405.1 CABZ01054405.1 115 0.874 - - - - - - 0.874 - -
63. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 0.874 - - - - - - 0.874 - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
64. wu:fi34b01 38 0.874 - - - - - - 0.874 - - wu:fi34b01
65. GPR158 GPR158 64 0.874 - - - - - - 0.874 - -
66. PRKCA_1 ENSDARG00000099841 12 0.874 - - - - - - 0.874 - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
67. lppr5b lppr5b 23 0.874 - - - - - - 0.874 - -
68. HIST1H4J HIST1H4J 31 0.874 - - - - - - 0.874 - -
69. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.874 - - - - - - 0.874 - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
70. pla1a ENSDARG00000102176, ENSDARG00000109274 29 0.874 - - - - - - 0.874 - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
71. si:dkeyp-100a1.6 ENSDARG00000092141 33 0.874 - - - - - - 0.874 - - si:dkeyp-100a1.6 [Source:ZFIN;Acc:ZDB-GENE-081104-448]
72. BX324215.3 BX324215.3 12 0.874 - - - - - - 0.874 - -
73. FP085412.2 FP085412.2 5 0.874 - - - - - - 0.874 - -
74. rad51c ENSDARG00000068919 98 0.874 - - - - - - 0.874 - - RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-204]
75. dapp1 ENSDARG00000039535 23 0.874 - - - - - - 0.874 - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
76. C24H7orf10 C24H7orf10 7 0.874 - - - - - - 0.874 - -
77. ins ENSDARG00000035350, ENSDARG00000116735 317 0.874 - - - - - - 0.874 - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
78. lrrc24 ENSDARG00000101704 224 0.87 - - - - - - 0.870 - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
79. kcnk5a ENSDARG00000023587, ENSDARG00000111204 128 0.868 - - - - - - 0.868 - - potassium channel, subfamily K, member 5a [Source:ZFIN;Acc:ZDB-GENE-051113-112]
80. ECEL1 ENSDARG00000060549 62 0.868 - - - - - - 0.868 - - endothelin converting enzyme-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-692]
81. drd4a ENSDARG00000038363 82 0.867 - - - - - - 0.867 - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
82. mlh1 ENSDARG00000025948 130 0.867 - - - - - - 0.867 - - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
83. olfml2bb ENSDARG00000021480 256 0.866 - - - - - - 0.866 - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
84. slc5a11 ENSDARG00000019932 160 0.866 - - - - - - 0.866 - - solute carrier family 5 (sodium/inositol cotransporter), member 11 [Source:ZFIN;Acc:ZDB-GENE-041114-9]
85. si:ch211-218c6.9 si:ch211-218c6.9 40 0.865 - - - - - - 0.865 - -
86. si:ch211-113e8.11 ENSDARG00000076585 721 0.864 - - - - - - 0.864 - - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
87. C21H5orf24 C21H5orf24 333 0.863 - - - - - 0.863 - - -
88. emc9 ENSDARG00000034633 686 0.862 - - - - - 0.862 - - - ER membrane protein complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-040426-693]
89. scml4 ENSDARG00000017266 194 0.862 - - - - - - 0.862 - - Scm polycomb group protein like 4 [Source:ZFIN;Acc:ZDB-GENE-041210-338]
90. telo2 ENSDARG00000000830, ENSDARG00000111572 241 0.861 - - - - - 0.861 - - - TEL2, telomere maintenance 2, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061103-523]
91. dusp7 ENSDARG00000101413 1307 0.861 - - - - - - 0.861 - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
92. itsn1 ENSDARG00000000086 684 0.861 - - - - - - 0.861 - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
93. CU570684.5 CU570684.5 55 0.86 - - - - - - 0.860 - -
94. zdhhc24_1 ENSDARG00000105134, ENSDARG00000110259, ENSDARG00000116301 40 0.86 - - - - - - 0.860 - - zinc finger, DHHC-type containing 24 [Source:ZFIN;Acc:ZDB-GENE-040718-8]
95. ulk1a ENSDARG00000062518 10 0.86 - - - - - - 0.860 - - unc-51 like autophagy activating kinase 1a [Source:ZFIN;Acc:ZDB-GENE-080723-31]
96. hs3st3l ENSDARG00000059903 184 0.86 - - - - - - 0.860 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
97. CABZ01079241.1 ENSDARG00000098424 88 0.859 - - - - - - 0.859 - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
98. hspa12a ENSDARG00000070603 1474 0.859 - - - - - - 0.859 - - heat shock protein 12A [Source:ZFIN;Acc:ZDB-GENE-031001-1]
99. PPP1R35 ENSDARG00000068916 94 0.855 - - - - - - 0.855 - - protein phosphatase 1, regulatory subunit 35 [Source:ZFIN;Acc:ZDB-GENE-060825-232]
100. CU694368.1 CU694368.1 56 0.853 0.853 - - - - - - - -

There are 461 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA