Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gabpa

Gene Name Gene ID Reads Annotation
gabpa ENSDARG00000069289, ENSDARG00000110923 1536 GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]










Genes with expression patterns similar to gabpa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
2. sin3b ENSDARG00000062472 2025 2.472 - - 0.701 - 0.989 - - - 0.782 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
3. zic5 ENSDARG00000016022 1034 2.457 - 0.720 - - 0.981 - - 0.756 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
4. aldh16a1 ENSDARG00000037935 617 2.428 - 0.731 - - 0.980 - 0.717 - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
5. h1fx ENSDARG00000054058 4075 2.412 - 0.744 - - 0.955 - - - 0.713 H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
6. hmgb2b ENSDARG00000053990 11519 2.144 0.720 - - - 0.720 - - - 0.704 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
7. htatip htatip 1553 1.877 - - - - 0.976 - 0.901 - -
8. smn1 ENSDARG00000018494 1024 1.846 - 0.866 - - 0.980 - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
9. spcs2 ENSDARG00000042823 10032 1.813 - - - - 0.981 - 0.832 - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
10. fam134c fam134c 1550 1.799 - - - - 0.967 - 0.832 - -
11. nol9 ENSDARG00000077751 2471 1.773 - 0.812 - - 0.961 - - - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
12. loxl2b ENSDARG00000044074 1919 1.764 - 0.788 - - 0.976 - - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
13. CR548630.1 CR548630.1 3301 1.744 - 0.762 - - 0.982 - - - -
14. tmem50a ENSDARG00000015757 3244 1.731 - - - - 0.968 - 0.763 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
15. pip5k1bb ENSDARG00000006508 2812 1.723 - - - - 0.980 - 0.743 - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
16. FP245444.1 FP245444.1 1922 1.719 - - - - 0.981 - - - 0.738
17. nuf2 ENSDARG00000034624 2252 1.707 - 0.738 - - 0.969 - - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
18. lsm14ab ENSDARG00000100553 3837 1.703 0.747 - - - 0.956 - - - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
19. crebbpa ENSDARG00000104609 1739 1.696 - 0.884 - - - - 0.812 - - CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
20. rab32a ENSDARG00000029036 2157 1.691 - - - - 0.941 - - 0.750 - RAB32a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031006-10]
21. C24H17orf96 C24H17orf96 1538 1.691 - - - - 0.978 - - - 0.713
22. mrps15 ENSDARG00000109289 3258 1.682 - - - - 0.972 - - 0.710 - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
23. txlna ENSDARG00000077037 2614 1.677 - 0.704 - - 0.973 - - - - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
24. zgc:113442 ENSDARG00000101906 3092 1.676 - 0.730 - - 0.946 - - - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
25. cdk2ap2 ENSDARG00000103145 8024 1.674 - - - - 0.817 - 0.857 - - cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
26. rpl7l1 ENSDARG00000042864 3256 1.672 - - - - 0.866 - - 0.806 - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
27. sf3b2 ENSDARG00000018049 4675 1.658 - - - - 0.927 - 0.731 - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
28. fen1 ENSDARG00000011404 3358 1.657 - - 0.716 - 0.941 - - - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
29. pvrl1b 1645 1.625 - 0.792 - - - - 0.833 - - poliovirus receptor-related 1b
30. e2f7 ENSDARG00000008986 1439 1.623 0.766 - - - - - 0.857 - - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
31. msi1 ENSDARG00000010710 2634 1.622 - - - 0.730 0.892 - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
32. smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 1.604 - 0.742 - - 0.862 - - - - survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]
33. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.597 - 0.788 - - 0.809 - - - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
34. rbm8a ENSDARG00000016516 8789 1.595 - - - - 0.801 - 0.794 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
35. zzz3 ENSDARG00000077581 1343 1.593 - 0.872 - - - - 0.721 - - zinc finger, ZZ-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6450]
36. GIT1 ENSDARG00000039489 1157 1.589 - 0.772 - - - - - 0.817 - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
37. pane1 ENSDARG00000024681 866 1.579 - - - 0.707 - - 0.872 - - proliferation associated nuclear element [Source:ZFIN;Acc:ZDB-GENE-040611-4]
38. f2rl1.2 ENSDARG00000077540 822 1.575 - 0.845 - - - - 0.730 - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
39. pop5 ENSDARG00000053452 1347 1.572 - 0.831 - - - - - 0.741 - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
40. crkl ENSDARG00000028699 2966 1.561 - 0.754 - - - - - 0.807 - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
41. azi1_1 azi1_1 1375 1.555 - 0.763 - - - - 0.792 - -
42. ahi1 ENSDARG00000044056 951 1.553 0.732 0.821 - - - - - - - Abelson helper integration site 1 [Source:ZFIN;Acc:ZDB-GENE-060803-1]
43. psmd4b ENSDARG00000023279 2002 1.552 - 0.738 - - - - 0.814 - - proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
44. ube2e2 ENSDARG00000034670 5918 1.547 - - - - 0.846 - 0.701 - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
45. ndst2a ENSDARG00000086269 754 1.525 - 0.821 - - - - 0.704 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
46. snrpd3l ENSDARG00000076283 7655 1.524 - - - 0.736 0.788 - - - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
47. GANAB_2 GANAB_2 3210 1.507 0.726 - - - - - 0.781 - -
48. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.491 - 0.728 - - - - 0.763 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
49. g2e3 ENSDARG00000001313 1485 1.483 - - - 0.706 - - - 0.777 - G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
50. CABZ01062452.1 CABZ01062452.1 1721 1.481 - 0.744 - - - 0.737 - - -
51. casc3 ENSDARG00000029911 1174 1.48 - 0.701 - - - - 0.779 - - casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
52. fam199x ENSDARG00000009982 967 1.468 0.753 0.715 - - - - - - - family with sequence similarity 199, X-linked [Source:ZFIN;Acc:ZDB-GENE-040808-24]
53. rqcd1 2301 1.464 - 0.732 - - - - 0.732 - - RCD1 required for cell differentiation1 homolog (S. pombe)
54. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.456 - 0.733 0.723 - - - - - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
55. rab34b ENSDARG00000010977 590 1.455 - 0.748 - - - 0.707 - - - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
56. ppp2r1b ppp2r1b 3469 1.448 - - - - - 0.744 0.704 - -
57. efnb2a ENSDARG00000020164 5262 1.439 - - - - - 0.702 - - 0.737 ephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]
58. prmt1 ENSDARG00000010246 11311 1.437 - - - - - - 0.705 0.732 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
59. CPAMD8 ENSDARG00000056530 3481 1.433 - 0.706 - - - - 0.727 - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
60. FRMD4A ENSDARG00000042249 2883 1.432 - 0.725 - - - - 0.707 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
61. LIMD2 ENSDARG00000078092 3414 1.426 - 0.707 - - - - 0.719 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
62. rbb4 rbb4 15541 1.425 - - 0.714 - - - - 0.711 -
63. MSL1_1 MSL1_1 2365 1.425 - - - - - - 0.710 - 0.715
64. TNKS TNKS 2775 1.424 - - - - - - 0.708 - 0.716
65. lmnb1 ENSDARG00000044299 9817 1.415 - - - - - 0.706 0.709 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
66. rfc5 ENSDARG00000035634 974 1.414 - - 0.701 - - - 0.713 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
67. ncoa4 ENSDARG00000021439 4581 1.408 - 0.702 - - - - 0.706 - - nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
68. srsf4 ENSDARG00000105293 9657 1.403 - - - - - 0.700 0.703 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
69. odz4 odz4 822 0.99 - - - - 0.990 - - - -
70. larp7 ENSDARG00000017315 1194 0.989 - - - - 0.989 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
71. exoc3l4 ENSDARG00000058180 923 0.989 - - - - 0.989 - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
72. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.989 - - - - 0.989 - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
73. prdm16 prdm16 1346 0.988 - - - - 0.988 - - - -
74. FOXL2 239 0.988 - - - - 0.988 - - - - forkhead box L2, transcript variant X1
75. ccdc28b ENSDARG00000011222 528 0.988 - - - - 0.988 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
76. BX005008.2 BX005008.2 708 0.988 - - - - 0.988 - - - -
77. cuedc2 ENSDARG00000039365 484 0.987 - - - - 0.987 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
78. cenpi ENSDARG00000052565 482 0.987 - - - - 0.987 - - - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
79. lgi1a ENSDARG00000020493 1218 0.987 - - - - 0.987 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
80. smurf1 ENSDARG00000016086 878 0.987 - - - - 0.987 - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
81. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.987 - - - - 0.987 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
82. slc2a15b ENSDARG00000053269 899 0.987 - - - - 0.987 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
83. FBXO33 ENSDARG00000075400 1164 0.987 - - - - 0.987 - - - - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
84. wdr24 ENSDARG00000025507 505 0.987 - - - - 0.987 - - - - WD repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-040426-2012]
85. ccr10 ENSDARG00000040643 255 0.987 - - - - 0.987 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
86. myl2b ENSDARG00000053424 226 0.986 - - - - 0.986 - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
87. med13b ENSDARG00000003910 1143 0.986 - - - - 0.986 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
88. nefma ENSDARG00000021351 790 0.986 - - - - 0.986 - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
89. gorab ENSDARG00000042031 483 0.986 - - - - 0.986 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
90. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 0.986 - - - - 0.986 - - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
91. fam193b ENSDARG00000102831 442 0.986 - - - - 0.986 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
92. ago4 ENSDARG00000100854 496 0.986 - - - - 0.986 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
93. tmem88a ENSDARG00000056920 536 0.986 - - - - 0.986 - - - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
94. atxn7l3 ENSDARG00000029331 531 0.986 - - - - 0.986 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
95. med14 ENSDARG00000009953 1383 0.986 - - - - 0.986 - - - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
96. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 0.986 - - - - 0.986 - - - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
97. dvl3a ENSDARG00000015707 1132 0.985 - - - - 0.985 - - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
98. aspg ENSDARG00000052942 1406 0.985 - - - - 0.985 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
99. ctdspl2b ENSDARG00000060586 1682 0.985 - - - - 0.985 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
100. lig4 ENSDARG00000060620 369 0.985 - - - - 0.985 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]

There are 1070 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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