Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for gabarapa

Gene Name Gene ID Reads Annotation
gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]










Genes with expression patterns similar to gabarapa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
2. gstp1 ENSDARG00000104068 12698 2.557 0.813 0.776 - - - - - - 0.968 glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
3. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 2.553 - 0.753 - - - 0.805 0.995 - - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
4. sf3a3 ENSDARG00000100114 4511 2.474 - 0.735 - - - 0.758 - - 0.981 splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
5. stxbp2 ENSDARG00000007603 1646 2.266 - 0.722 - - - 0.812 - 0.732 - syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
6. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1.983 - - - - - - 0.995 - 0.988 aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
7. arhgef12b ENSDARG00000100913 1358 1.923 0.942 - - - - - - - 0.981 Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
8. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.875 0.878 - - - - - 0.997 - - ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
9. AP3B1 2363 1.853 0.934 0.919 - - - - - - - adaptor related protein complex 3 beta 1 subunit
10. fuca1 fuca1 6176 1.851 - - - - - 0.860 0.991 - -
11. arrdc3a ENSDARG00000052690 2280 1.851 - 0.854 - - - - 0.997 - - arrestin domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2913]
12. epn2 ENSDARG00000008377 5458 1.826 0.956 - - - - 0.870 - - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
13. gorasp1 gorasp1 3075 1.812 0.934 0.878 - - - - - - -
14. si:dkey-13i19.8 ENSDARG00000093058 4617 1.808 - - - - - 0.831 0.977 - - si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
15. myeov2 3351 1.801 0.929 - - - - 0.872 - - - myeloma overexpressed 2
16. txnrd1 11401 1.795 0.919 - - - - 0.876 - - - thioredoxin reductase 1
17. lgals1l1 ENSDARG00000088711 4515 1.789 - - - - - 0.811 - - 0.978 lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
18. SH3BGRL ENSDARG00000058302 4525 1.784 - 0.786 - - - - 0.998 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
19. snrpb ENSDARG00000011125 11729 1.783 0.801 - - - - - - - 0.982 small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
20. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 1.783 - - - - - 0.785 - - 0.998 guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
21. msxd msxd 1750 1.77 - 0.777 - - - - - - 0.993
22. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.77 0.945 0.825 - - - - - - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
23. h3f3d ENSDARG00000045248 43757 1.759 - - - - - - 0.985 - 0.774 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
24. anxa1c ENSDARG00000104359 23181 1.758 - - - - - 0.798 0.960 - - annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
25. dynll1 ENSDARG00000058454 33932 1.752 0.788 - - - - - 0.964 - - dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961]
26. ctsf ENSDARG00000063095 4564 1.743 0.949 0.794 - - - - - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
27. rnasel3 ENSDARG00000036171, ENSDARG00000116275 3928 1.743 0.823 - - - - - 0.920 - - ribonuclease like 3 [Source:ZFIN;Acc:ZDB-GENE-050809-5]
28. cdh1 ENSDARG00000102750 8654 1.743 - 0.764 - - - - 0.979 - - cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
29. rbm39a ENSDARG00000011613 4520 1.732 - - - - - 0.739 - - 0.993 RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
30. mtmr14 ENSDARG00000059642 1405 1.731 - - - - - - 0.996 0.735 - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
31. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.724 0.947 0.777 - - - - - - - connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
32. lsm12b ENSDARG00000109510 14459 1.717 - 0.735 - - - - 0.982 - - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
33. mapk6 ENSDARG00000032103 6422 1.714 - 0.717 - - - - 0.997 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
34. sult6b1 ENSDARG00000086826 2070 1.714 0.944 0.770 - - - - - - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
35. si:ch211-214j24.10 ENSDARG00000045847 5145 1.713 0.902 0.811 - - - - - - - si:ch211-214j24.10 [Source:ZFIN;Acc:ZDB-GENE-030131-6301]
36. selj 884 1.71 0.943 - - - - 0.767 - - - selenoprotein J
37. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 1.709 0.941 0.768 - - - - - - - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]
38. fbl ENSDARG00000053912 5891 1.706 - - - - - 0.709 0.997 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
39. ube2e1 ENSDARG00000116649 10656 1.706 0.947 0.759 - - - - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
40. hrsp12 3981 1.704 - 0.730 - - - - 0.974 - - heat-responsive protein 12, transcript variant 1
41. add1 ENSDARG00000103962 4938 1.698 - - - - - 0.701 - - 0.997 adducin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030909-2]
42. sbf1 ENSDARG00000062968, ENSDARG00000111535 1287 1.697 0.943 0.754 - - - - - - - SET binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-139]
43. itsn1 ENSDARG00000000086 684 1.697 0.952 - - - - 0.745 - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
44. naga ENSDARG00000099313 2483 1.695 0.926 0.769 - - - - - - - N-acetylgalactosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-051113-256]
45. CABZ01080098.1 ENSDARG00000110680 10942 1.684 0.903 0.781 - - - - - - -
46. xpot ENSDARG00000099652 3026 1.684 0.933 - - - - 0.751 - - - exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
47. evi5b ENSDARG00000070839 239 1.679 0.939 - - - - 0.740 - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
48. mid1ip1b ENSDARG00000019302 1589 1.678 - 0.790 - - - 0.888 - - - MID1 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1720]
49. ppig ENSDARG00000044431 3427 1.678 0.953 - - - - 0.725 - - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
50. lama5 ENSDARG00000058543 2782 1.672 0.947 - - - - 0.725 - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
51. efna1a ENSDARG00000030326 1692 1.67 0.929 - - - - 0.741 - - - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
52. lipin2 2021 1.667 0.930 0.737 - - - - - - - lipin 2, transcript variant X2
53. itih2 ENSDARG00000045516 1893 1.66 0.888 0.772 - - - - - - - inter-alpha-trypsin inhibitor heavy chain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1942]
54. capn5a ENSDARG00000103317 1923 1.66 0.956 - - - - 0.704 - - - calpain 5a [Source:ZFIN;Acc:ZDB-GENE-061103-214]
55. fkbp2 ENSDARG00000044540 1615 1.659 - - - - - 0.750 - 0.909 - FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
56. C6H2orf40 C6H2orf40 4224 1.648 - 0.779 - - - 0.869 - - -
57. cnih4 ENSDARG00000087759 3937 1.639 0.930 0.709 - - - - - - - cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
58. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 1.639 0.937 0.702 - - - - - - - cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
59. pgm1 ENSDARG00000013561 11984 1.638 0.865 0.773 - - - - - - - phosphoglucomutase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1245]
60. sec11a ENSDARG00000008936, ENSDARG00000116303 6529 1.628 - 0.848 - - - 0.780 - - - SEC11 homolog A, signal peptidase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040718-227]
61. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.624 0.846 0.778 - - - - - - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
62. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.621 0.842 - - - - 0.779 - - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
63. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.615 0.890 0.725 - - - - - - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
64. ctbp2 ctbp2 3255 1.609 0.895 0.714 - - - - - - -
65. arpc4l ENSDARG00000058225 10107 1.609 0.882 0.727 - - - - - - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
66. KPNA6 ENSDARG00000044980 543 1.607 - 0.789 - - - 0.818 - - - karyopherin alpha 6 (importin alpha 7) [Source:ZFIN;Acc:ZDB-GENE-130530-626]
67. tgm1 ENSDARG00000017799 442 1.603 - - - - - 0.848 - 0.755 - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
68. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.602 - 0.712 - - - 0.890 - - - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
69. nrg1 ENSDARG00000104314 1081 1.595 - 0.790 - - - 0.805 - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
70. rrbp1a ENSDARG00000013763 4723 1.594 - 0.784 - - - 0.810 - - - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
71. gsna ENSDARG00000011459, ENSDARG00000115062, ENSDARG00000116084 1623 1.582 - 0.815 - - - 0.767 - - - gelsolin a [Source:ZFIN;Acc:ZDB-GENE-030131-9653]
72. cln6a ENSDARG00000077584 1090 1.58 - - - - - 0.868 - 0.712 - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
73. ftr83 ENSDARG00000025403, ENSDARG00000110533 1428 1.577 - 0.795 - - - 0.782 - - - finTRIM family, member 83 [Source:ZFIN;Acc:ZDB-GENE-031002-11]
74. tefb ENSDARG00000098103 370 1.576 - - - - - 0.830 - 0.746 - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
75. NID2 NID2 5282 1.574 0.832 0.742 - - - - - - -
76. cldnf ENSDARG00000043133 1006 1.571 - - - - - 0.801 - 0.770 - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
77. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 1.57 - 0.831 - - - 0.739 - - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
78. cenpe ENSDARG00000063385 4428 1.57 0.847 - - - - 0.723 - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
79. mcl1a ENSDARG00000009779 2058 1.569 - 0.706 - - - 0.863 - - - MCL1, BCL2 family apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-7]
80. arpc1a ENSDARG00000008383 7353 1.563 0.841 0.722 - - - - - - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
81. ppapdc1b ppapdc1b 2866 1.562 - 0.756 - - - 0.806 - - -
82. tmem258 ENSDARG00000078785 9578 1.555 0.815 0.740 - - - - - - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
83. vta1 ENSDARG00000013732 6072 1.553 - - - - - 0.822 - 0.731 - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
84. maff ENSDARG00000028957, ENSDARG00000111050 1809 1.55 - - - - - 0.822 - 0.728 - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F [Source:ZFIN;Acc:ZDB-GENE-040426-1280]
85. atg5 ENSDARG00000023396 1726 1.549 - 0.715 - - - 0.834 - - - ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]
86. zgc:100918 ENSDARG00000087243 5451 1.549 - 0.713 - - - 0.836 - - - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
87. limk2 ENSDARG00000005104 2598 1.546 - 0.813 - - - - - 0.733 - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
88. arpc5a ENSDARG00000039142 5482 1.54 - 0.718 - - - 0.822 - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
89. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 1.539 - 0.768 - - - - - 0.771 - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
90. tnikb ENSDARG00000009031 1836 1.529 - 0.812 - - - 0.717 - - - TRAF2 and NCK interacting kinase b [Source:ZFIN;Acc:ZDB-GENE-051113-320]
91. tgm1l4 ENSDARG00000101407 800 1.527 - 0.755 - - - 0.772 - - - transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
92. macc1 ENSDARG00000040717 1669 1.526 - 0.808 - - - 0.718 - - - metastasis associated in colon cancer 1 [Source:ZFIN;Acc:ZDB-GENE-091006-3]
93. trpm7 ENSDARG00000036232 925 1.524 - 0.728 - - - 0.796 - - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
94. zgc:112964 ENSDARG00000101200 4751 1.519 0.737 0.782 - - - - - - - zgc:112964 [Source:ZFIN;Acc:ZDB-GENE-050306-47]
95. RBMS1 RBMS1 258 1.517 - - - - - 0.760 - 0.757 -
96. bckdk ENSDARG00000016904 3775 1.515 - 0.708 - - - 0.807 - - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
97. ppt1 ENSDARG00000039980 1599 1.515 - 0.742 - - - 0.773 - - - palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) [Source:ZFIN;Acc:ZDB-GENE-040426-2653]
98. prdm4 ENSDARG00000017366 454 1.502 - - - - - 0.768 - 0.734 - PR domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-131]
99. rhpn2 ENSDARG00000014577 2537 1.501 - 0.781 - - - - - 0.720 - rhophilin, Rho GTPase binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9927]
100. atf4b1 atf4b1 17316 1.5 0.746 - - - - 0.754 - - -

There are 1444 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA