Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for fxr1

Gene Name Gene ID Reads Annotation
fxr1 ENSDARG00000022968 2831 fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]










Genes with expression patterns similar to fxr1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fxr1 ENSDARG00000022968 2831 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
2. nexn ENSDARG00000057317 10972 4.021 0.878 - - 0.708 0.774 0.758 0.903 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
3. fermt2 ENSDARG00000020242 9351 3.49 0.827 0.923 - - - 0.844 0.896 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
4. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 3.369 0.918 - - - 0.772 0.764 0.915 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
5. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.363 0.905 - - 0.732 - 0.841 0.885 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
6. txlnbb ENSDARG00000076241 6396 3.314 0.826 - 0.706 - - 0.887 0.895 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
7. cacng1 cacng1 3118 3.289 0.901 - - - 0.715 0.828 0.845 - -
8. SYNPO2L SYNPO2L 6697 3.221 0.830 0.973 - 0.705 - - - - 0.713
9. PTPLA PTPLA 4044 3.174 0.791 - - 0.741 - 0.724 0.918 - -
10. NAT16 ENSDARG00000086222 4682 3.162 0.920 - - - 0.749 0.712 0.781 - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
11. hsp90aa1.1 ENSDARG00000010478 47784 3.159 0.732 - - - 0.733 0.785 0.909 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
12. alpk3a ENSDARG00000078989 1992 3.092 0.854 - - - 0.710 0.750 0.778 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
13. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 3.086 0.725 - 0.727 - - 0.728 0.906 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
14. smyd2b ENSDARG00000005629 8181 2.967 0.830 - - - 0.703 0.713 - 0.721 - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
15. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 2.756 0.872 0.969 - - - - 0.915 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
16. smpx ENSDARG00000045302 2175 2.701 - 0.978 - - - 0.807 0.916 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
17. adss ENSDARG00000002071 5497 2.693 0.819 0.971 - - - - 0.903 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
18. si:ch211-156j16.1 ENSDARG00000092035 7441 2.657 0.816 0.926 - - - - 0.915 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
19. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 2.654 0.764 0.977 - - - - 0.913 - - RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
20. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 2.648 0.817 0.924 - - - - 0.907 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
21. si:ch211-151o1.2 si:ch211-151o1.2 3580 2.615 0.836 0.970 - - - - 0.809 - -
22. sox6 ENSDARG00000015536 7728 2.6 0.938 - - - - 0.759 0.903 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
23. unc45b ENSDARG00000008433 8298 2.592 0.861 0.798 - - - - 0.933 - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
24. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.586 0.884 - - - - 0.844 0.858 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
25. klhl40a ENSDARG00000039052 2537 2.568 0.885 - - - - 0.785 0.898 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
26. zgc:92518 ENSDARG00000016343 3837 2.563 0.878 - - - - 0.782 0.903 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
27. mir133b_1 671 2.56 0.873 - - - - 0.857 0.830 - - microRNA 133b
28. atp1b3b ENSDARG00000042837 5163 2.552 0.845 - - - - 0.783 0.924 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
29. flncb ENSDARG00000018820 5595 2.542 0.893 - - - - 0.803 0.846 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
30. NRAP ENSDARG00000009341 3565 2.533 0.799 - - - - 0.815 0.919 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
31. limch1a ENSDARG00000074275 2981 2.526 0.841 - - - - 0.776 0.909 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
32. alpk2 ENSDARG00000079637 1483 2.524 0.798 - - - - 0.815 0.911 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
33. ryr3 ENSDARG00000071331 6795 2.519 0.816 - - - - 0.804 0.899 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
34. MYOT ENSDARG00000076312 1791 2.517 0.914 - - - - 0.740 0.863 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
35. ppapdc3 ppapdc3 4924 2.514 0.855 - - - - 0.738 0.921 - -
36. CABZ01074435.1 CABZ01074435.1 4551 2.513 0.842 - - - - 0.790 0.881 - -
37. mafa ENSDARG00000015890 2140 2.503 0.796 - - - - 0.823 0.884 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
38. kcnma1a ENSDARG00000079840 2584 2.5 0.836 - - - - 0.831 0.833 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
39. synpo2lb ENSDARG00000078696 2361 2.491 0.791 - - - - 0.863 0.837 - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
40. murcb murcb 13655 2.479 0.850 - - 0.720 - - 0.909 - -
41. fitm1 ENSDARG00000056464 1759 2.474 0.824 - - - - 0.792 0.858 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
42. trdn ENSDARG00000041779 4283 2.469 0.850 - - - - 0.713 0.906 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
43. sh3bgr ENSDARG00000021633 3498 2.467 0.794 - - - - 0.762 0.911 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
44. klhl41b ENSDARG00000006757 10762 2.466 0.827 - - - - 0.713 0.926 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
45. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 2.465 0.730 0.950 - - - 0.785 - - - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
46. obsl1b ENSDARG00000077388 2511 2.46 0.797 - - - - 0.809 0.854 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
47. PTGES3L PTGES3L 4801 2.457 0.803 - - - - 0.768 0.886 - -
48. anxa6 ENSDARG00000013335 3588 2.456 - - - - - 0.853 0.875 0.728 - annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
49. myoz2a ENSDARG00000012311 1373 2.445 0.706 - - - - 0.836 0.903 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
50. cnbpb ENSDARG00000070922 14606 2.444 0.821 - - - - 0.764 0.859 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
51. si:ch211-242b18.1 ENSDARG00000054723 2929 2.438 0.767 - - - - 0.820 0.851 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
52. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 2.436 0.804 - - - - 0.780 0.852 - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
53. smtnl1 ENSDARG00000041257 7410 2.435 0.802 - - - - 0.731 0.902 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
54. cap2 ENSDARG00000104478 3266 2.433 0.743 - - - - 0.747 0.943 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
55. PTP4A3 ENSDARG00000039997 3814 2.427 0.881 - - - - 0.824 0.722 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
56. pbxip1a ENSDARG00000071015 4960 2.425 0.801 - - - 0.705 - 0.919 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
57. sptb ENSDARG00000030490 7128 2.422 0.784 - 0.714 - - - 0.924 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
58. zgc:158296 ENSDARG00000070923 3935 2.419 - - - - - 0.821 0.893 0.705 - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
59. asb5b ENSDARG00000053222 1207 2.414 0.811 - - - - 0.784 0.819 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
60. crip2 ENSDARG00000070670 4844 2.411 0.752 - - - - 0.827 0.832 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
61. METTL21C METTL21C 1717 2.408 0.767 - - - - 0.771 0.870 - -
62. trim101 ENSDARG00000018264 827 2.405 0.777 - - - - 0.788 0.840 - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
63. myhc4 ENSDARG00000035438 1322 2.401 0.747 - - - - 0.744 0.910 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
64. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.395 0.794 - - - - 0.712 0.889 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
65. chrne ENSDARG00000034307, ENSDARG00000112263 1022 2.395 0.769 - - - - 0.828 0.798 - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
66. CR847973.1 ENSDARG00000115516 8754 2.393 0.765 - - - - 0.740 0.888 - -
67. mdh1b ENSDARG00000018008 3196 2.392 0.787 - - - - 0.706 0.899 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
68. hars ENSDARG00000003693 7217 2.389 0.752 - - - - 0.856 0.781 - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
69. DUSP27 ENSDARG00000099889 1197 2.385 0.790 - - - - 0.788 0.807 - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
70. twf2a ENSDARG00000094792 687 2.379 0.722 - - - - 0.764 0.893 - - twinfilin actin-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7638]
71. TRIM63 TRIM63 1600 2.375 0.791 - - - - 0.720 0.864 - -
72. stac3 ENSDARG00000098883 1765 2.364 0.767 - - - - 0.739 0.858 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
73. stc2a ENSDARG00000056680, ENSDARG00000109468 1156 2.364 0.828 - - - - 0.747 0.789 - - stanniocalcin 2a [Source:ZFIN;Acc:ZDB-GENE-041008-14]
74. six1b ENSDARG00000026473 1908 2.36 0.778 - - - - 0.714 0.868 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
75. trim63 trim63 2437 2.353 0.787 - - - 0.708 - 0.858 - -
76. nid1a ENSDARG00000068710 3948 2.349 0.728 - - - - 0.733 0.888 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
77. arvcfb ENSDARG00000061688 2388 2.321 0.828 - - - - 0.718 0.775 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
78. plxnb1a ENSDARG00000075821 1702 2.319 0.784 - - - - 0.703 0.832 - - plexin b1a [Source:ZFIN;Acc:ZDB-GENE-050302-63]
79. lrrfip1a ENSDARG00000030012 1263 2.299 0.721 - - - - 0.748 0.830 - - leucine rich repeat (in FLII) interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-99]
80. mdh2 ENSDARG00000043371 14485 2.278 0.718 - - - - - 0.839 - 0.721 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
81. cct7 ENSDARG00000007385 1513 2.277 0.779 - - - - 0.701 0.797 - - chaperonin containing TCP1, subunit 7 (eta) [Source:ZFIN;Acc:ZDB-GENE-020419-7]
82. FRMD5 ENSDARG00000075942 569 2.277 0.702 - - - - 0.708 0.867 - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
83. obsl1a ENSDARG00000003684 1288 2.264 0.739 - - - - 0.823 0.702 - - obscurin-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-649]
84. tnnt2c ENSDARG00000032242 28801 2.263 0.726 - - - 0.725 - 0.812 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
85. meox1 ENSDARG00000007891, ENSDARG00000115382 1584 2.258 0.711 - - - - 0.776 0.771 - - mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]
86. ndufv1 ENSDARG00000036438 8437 2.239 0.815 - - - - 0.710 - 0.714 - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
87. si:ch1073-184j22.2 ENSDARG00000078598 707 2.238 0.783 - - - - 0.734 0.721 - - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
88. klhl31 ENSDARG00000039066 13656 2.231 - - - - 0.750 - 0.741 - 0.740 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
89. fam212aa 1132 2.197 0.751 - - - - 0.746 0.700 - - family with sequence similarity 212, member Aa, transcript variant X1
90. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 2.194 0.745 - - - - - 0.730 - 0.719 ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
91. tnni2b.1 ENSDARG00000035958 51597 2.188 0.743 - 0.711 - 0.734 - - - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
92. phlda1 ENSDARG00000099129 711 2.174 0.755 - - - - 0.711 0.708 - - pleckstrin homology-like domain, family A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041010-103]
93. rps25 ENSDARG00000041811 52182 2.151 0.712 - - - - 0.717 0.722 - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
94. calm1b ENSDARG00000034187 13158 1.828 0.921 - - - - 0.907 - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
95. rtn2a ENSDARG00000016088 12184 1.827 0.885 - - - - - 0.942 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
96. cacna2d1a ENSDARG00000014804 1924 1.808 0.856 - - - - - 0.952 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
97. COL22A1 COL22A1 4473 1.806 0.887 - - - - - 0.919 - -
98. jph2 ENSDARG00000028625 6706 1.8 0.868 - - - - - 0.932 - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
99. rtn2b ENSDARG00000057027 1391 1.792 - - - - - 0.880 0.912 - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
100. sgcd ENSDARG00000098573 4980 1.789 0.896 - - - - - 0.893 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]

There are 1331 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA