Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for fubp3

Gene Name Gene ID Reads Annotation
fubp3 ENSDARG00000086896 21 far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]










Genes with expression patterns similar to fubp3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fubp3 ENSDARG00000086896 21 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
2. si:busm1-180g5.7 si:busm1-180g5.7 15 2.782 - 0.784 - - - 1.000 0.998 - -
3. CR749167.1 ENSDARG00000100165 38 2 - - - - 1.000 1.000 - - -
4. C25H11orf74 C25H11orf74 161 2 1.000 - - - - 1.000 - - -
5. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 2 - 1.000 - - - 1.000 - - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
6. dpyda dpyda 12 2 - - - - 1.000 1.000 - - -
7. CU633740.1 CU633740.1 8 2 - - - - 1.000 1.000 - - -
8. Telomerase-vert Telomerase-vert 8 2 1.000 - - - 1.000 - - - -
9. si:dkey-34f16.9 si:dkey-34f16.9 1 2 1.000 - - - - 1.000 - - -
10. prelp ENSDARG00000070597 99 1.938 - - 0.938 - 1.000 - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
11. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1.938 1.000 - 0.938 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
12. SH3RF3 ENSDARG00000102334 1 1.938 1.000 - 0.938 - - - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
13. si:dkey-246j6.2 si:dkey-246j6.2 0 1.938 - - 0.938 - 1.000 - - - -
14. foxe1 ENSDARG00000079266 6 1.905 - - - - 0.905 1.000 - - - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
15. dennd2c ENSDARG00000073738 161 1.894 0.953 - - - - - 0.941 - - DENN/MADD domain containing 2C [Source:ZFIN;Acc:ZDB-GENE-081105-71]
16. MYO15B ENSDARG00000074852 6 1.885 - 0.885 - - - 1.000 - - - myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
17. si:dkeyp-35e5.5 ENSDARG00000104026 3 1.885 - 0.885 - - 1.000 - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
18. PCOLCE PCOLCE 25 1.885 - 0.885 - - - 1.000 - - -
19. C3AR1 18 1.885 - 0.885 - - - 1.000 - - - C3a anaphylatoxin chemotactic receptor
20. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1.885 - 0.885 - - - 1.000 - - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
21. cd247l ENSDARG00000077240 25 1.885 - 0.885 - - 1.000 - - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
22. CR354382.1 CR354382.1 42 1.885 - 0.885 - - - 1.000 - - -
23. CCDC96 ENSDARG00000035963 5 1.883 - - - - 1.000 0.883 - - - coiled-coil domain containing 96 [Source:ZFIN;Acc:ZDB-GENE-081022-156]
24. lrrcc1 ENSDARG00000078535 118 1.876 - 0.876 - - - 1.000 - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
25. si:ch211-149k23.10 si:ch211-149k23.10 10 1.853 - - 0.853 - 1.000 - - - -
26. si:ch211-63o20.10 13 1.849 - - - - - 1.000 - - 0.849 si:ch211-63o20.10
27. PEG3_17 PEG3_17 15 1.847 - - - - - 1.000 - 0.847 -
28. ssh1a ENSDARG00000056780 3 1.847 - - - - 1.000 - - 0.847 - slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
29. gpr65 ENSDARG00000045957 4 1.847 - - - - - 1.000 - 0.847 - G protein-coupled receptor 65 [Source:ZFIN;Acc:ZDB-GENE-120709-81]
30. BX465851.1 BX465851.1 237 1.839 - 0.938 - - - - 0.901 - -
31. si:dkeyp-8h9.1 si:dkeyp-8h9.1 1 1.836 - - 0.836 - - - - 1.000 -
32. si:ch211-207m11.3 si:ch211-207m11.3 401 1.835 0.906 - - - - - 0.929 - -
33. rab25a ENSDARG00000058800 451 1.834 - 1.000 - - - - 0.834 - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
34. nfixb ENSDARG00000061836 7 1.829 1.000 - - - - - - 0.829 - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
35. si:dkey-250k10.4 ENSDARG00000099751 2 1.823 - 0.885 0.938 - - - - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
36. si:dkey-15h8.13 si:dkey-15h8.13 3 1.823 - 0.885 0.938 - - - - - -
37. si:dkey-56m15.4 si:dkey-56m15.4 39 1.823 - - - - - - 0.976 0.847 -
38. grin2da ENSDARG00000086207 28 1.818 - - - - 0.905 0.913 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a [Source:ZFIN;Acc:ZDB-GENE-041008-124]
39. tfap2d ENSDARG00000023272 308 1.816 - - 0.894 - 0.922 - - - - transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
40. CU915778.1 ENSDARG00000099025 40 1.797 - - - - - 1.000 - - 0.797
41. ECT2L 39 1.784 1.000 0.784 - - - - - - - epithelial cell transforming 2 like, transcript variant X4
42. ctgfb ENSDARG00000104292 69 1.782 - 0.784 - - - - 0.998 - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
43. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 1.773 - 0.784 - - - - 0.989 - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
44. tmem151a ENSDARG00000079908 2 1.768 1.000 - - - - - - - 0.768 transmembrane protein 151A [Source:ZFIN;Acc:ZDB-GENE-091118-118]
45. CABZ01053483.1 CABZ01053483.1 5 1.768 - - 0.938 - 0.830 - - - -
46. CABZ01111604.1 CABZ01111604.1 140 1.757 - - - - - 1.000 - 0.757 -
47. EGR4 ENSDARG00000077799 34 1.754 0.813 - - - 0.941 - - - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]
48. soul5l ENSDARG00000089879 20 1.753 - 0.885 - - - - - - 0.868 heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
49. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 1.749 - 0.780 - - 0.969 - - - - syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
50. habp2 ENSDARG00000057498 75 1.744 - 0.885 - - - 0.859 - - - hyaluronan binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4721]
51. RUNDC1 ENSDARG00000091962 693 1.742 0.849 - - - - - 0.893 - - RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
52. si:ch211-135f11.1 166 1.742 - 0.749 - - - - 0.993 - - si:ch211-135f11.1, transcript variant X3
53. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 1.728 - - - - 0.733 - 0.995 - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
54. ino80da ENSDARG00000104727 8 1.722 - 0.885 - - 0.837 - - - - INO80 complex subunit Da [Source:ZFIN;Acc:ZDB-GENE-091204-416]
55. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.718 - - - - 1.000 0.718 - - -
56. RORC ENSDARG00000087195 9 1.715 - - 0.938 - - - - 0.777 - RAR-related orphan receptor C [Source:ZFIN;Acc:ZDB-GENE-110411-42]
57. znf384l ENSDARG00000001015 137 1.711 1.000 - - - - 0.711 - - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
58. SIPA1L3 ENSDARG00000061699 268 1.707 - 0.846 - - - - 0.861 - - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
59. tapbp tapbp 70 1.692 0.764 - - - - - 0.928 - -
60. CCDC83 ENSDARG00000077179 29 1.678 - 0.885 - - - 0.793 - - - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]
61. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1.677 - - - - 0.830 - - 0.847 - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
62. si:dkey-43f9.4 si:dkey-43f9.4 180 1.647 - 0.726 - - - - 0.921 - -
63. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1.62 0.767 0.853 - - - - - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
64. scdb ENSDARG00000030265 271 1.615 0.762 - - - - - 0.853 - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
65. gnb3b ENSDARG00000002696 46 1.602 - 0.885 - - 0.717 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
66. si:ch211-10m5.3 si:ch211-10m5.3 10 1.6 0.715 0.885 - - - - - - -
67. lonp1 ENSDARG00000102765 507 1.6 - - - - - 0.744 0.856 - - lon peptidase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4006]
68. vwf ENSDARG00000077231 5 1.58 - - - - 0.733 - - 0.847 - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
69. atp8b2 ENSDARG00000099216 21 1.554 - - 0.836 - - 0.718 - - - ATPase phospholipid transporting 8B2 [Source:ZFIN;Acc:ZDB-GENE-030131-2474]
70. STYK1_1 STYK1_1 34 1.549 - 0.719 - - - 0.830 - - -
71. COX19 ENSDARG00000063882 419 1.545 0.769 - - - - - 0.776 - - cytochrome c oxidase assembly factor COX19 [Source:ZFIN;Acc:ZDB-GENE-070410-29]
72. leprel4 leprel4 34 1.535 - 0.767 - - 0.768 - - - -
73. aox1 aox1 14 1.517 - - - - - 0.785 - 0.732 -
74. lrp2bp ENSDARG00000040478 21 1.49 - 0.780 - - - 0.710 - - - LRP2 binding protein [Source:ZFIN;Acc:ZDB-GENE-070615-41]
75. zgc:136872 ENSDARG00000008553 9 1 - - - - - 1.000 - - - zgc:136872 [Source:ZFIN;Acc:ZDB-GENE-060421-5204]
76. igfbp6b ENSDARG00000090833 37 1 - - - - - 1.000 - - - insulin-like growth factor binding protein 6b [Source:ZFIN;Acc:ZDB-GENE-090521-2]
77. RAB37 RAB37 0 1 - - - - - 1.000 - - -
78. UNC119 UNC119 104 1 - - - - 1.000 - - - -
79. si:dkey-162h11.3 41 1 - - - - - 1.000 - - - si:dkey-162h11.3, transcript variant X2
80. si:dkey-46g23.5 ENSDARG00000008835 7 1 1.000 - - - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]
81. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1 - - - - - 1.000 - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
82. GPR113 GPR113 0 1 - - - - - 1.000 - - -
83. cox5aa_1 ENSDARG00000088383 3 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
84. BX119910.9 BX119910.9 7 1 - - - - 1.000 - - - -
85. tnr ENSDARG00000020771 20 1 1.000 - - - - - - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
86. si:dkey-93m18.3 ENSDARG00000092664 30 1 - - - - - 1.000 - - - si:dkey-93m18.3 [Source:ZFIN;Acc:ZDB-GENE-091204-346]
87. BX248496.1 BX248496.1 0 1 - - - - - 1.000 - - -
88. utrnp 0 1 - - - - 1.000 - - - - utrophin, pseudogene
89. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - - - - - 1.000 - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
90. TRIM8 TRIM8 5 1 - - - - 1.000 - - - -
91. RP1 ENSDARG00000077687 6 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
92. si:ch211-193e5.3 si:ch211-193e5.3 0 1 - - - - - 1.000 - - -
93. DGKG ENSDARG00000062696 1 1 - - - - 1.000 - - - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
94. si:dkey-40j3.3 ENSDARG00000103597 5 1 1.000 - - - - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
95. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - - - - - 1.000 - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
96. lrp2b ENSDARG00000007906 23 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
97. dre-mir-429b ENSDARG00000082968 212 1 1.000 - - - - - - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
98. si:ch211-284d12.1 si:ch211-284d12.1 1 1 1.000 - - - - - - - -
99. zgc:154125 ENSDARG00000071463 7 1 - - - - - 1.000 - - - zgc:154125 [Source:ZFIN;Acc:ZDB-GENE-061013-717]
100. BX294653.4 BX294653.4 1 1 - - - - 1.000 - - - -

There are 1981 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA