Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for fubp1

Gene Name Gene ID Reads Annotation
fubp1 ENSDARG00000029248 15259 far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]










Genes with expression patterns similar to fubp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fubp1 ENSDARG00000029248 15259 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
2. si:rp71-45k5.4 ENSDARG00000035679 10411 3.57 - 0.937 0.935 - - - 0.994 - 0.704 si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
3. akirin2 ENSDARG00000058729 13245 3.268 - 0.903 - 0.716 - - - 0.706 0.943 akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
4. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.638 - 0.937 - 0.822 - 0.879 - - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
5. snrpf ENSDARG00000105037 10241 2.638 - - 0.971 0.790 0.877 - - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
6. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 2.625 - - - 0.753 0.875 - 0.997 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
7. cdca7a ENSDARG00000077620 9345 2.579 - 0.948 0.922 0.709 - - - - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
8. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 2.56 - 0.891 - 0.759 0.910 - - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
9. eif3s6ip ENSDARG00000101082 18515 2.55 - 0.717 - - - 0.840 0.993 - - eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
10. wu:fk48d07 wu:fk48d07 13245 2.54 - 0.869 - 0.835 - 0.836 - - -
11. srsf2a ENSDARG00000057484 25721 2.533 - - 0.911 0.828 - 0.794 - - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
12. h3f3d ENSDARG00000045248 43757 2.527 - - - 0.801 - - 0.988 0.738 - H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
13. cdc42se1 ENSDARG00000023724 3901 2.463 - 0.929 - - 0.782 0.752 - - - CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
14. notch3 ENSDARG00000052139 15033 2.462 - 0.900 - 0.728 - - - 0.834 - notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]
15. hnrnpab hnrnpab 72354 2.455 - - 0.801 - - - 0.851 0.803 -
16. wu:fq41a10 wu:fq41a10 7009 2.425 - - - 0.736 - 0.838 - 0.851 -
17. ubc ENSDARG00000102632 36050 2.422 - - - 0.728 - - - 0.774 0.920 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
18. hnrnpub ENSDARG00000004735 16496 2.394 - - - 0.834 - - - 0.832 0.728 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
19. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 2.375 - - - 0.825 - 0.768 - - 0.782 protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
20. rrm1 ENSDARG00000014017 7296 2.32 - - - 0.752 0.834 - - 0.734 - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
21. meis1 meis1 6937 1.912 - - - - - 0.915 0.997 - -
22. mapre1b ENSDARG00000002659 9119 1.889 - - - - 0.892 - 0.997 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
23. fbl ENSDARG00000053912 5891 1.861 - - - - 0.864 - 0.997 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
24. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.858 - 0.861 - - - - 0.997 - - ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
25. hoxb3a ENSDARG00000029263 5493 1.855 - - - - - 0.858 0.997 - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
26. mapk6 ENSDARG00000032103 6422 1.83 - - - - 0.833 - 0.997 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
27. edf1 ENSDARG00000009950 10518 1.824 - - - - 0.835 - 0.989 - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
28. rab7 ENSDARG00000020497, ENSDARG00000109813, ENSDARG00000110814 2627 1.814 - - - - - 0.818 0.996 - - RAB7, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-1352]
29. hnrnpm ENSDARG00000061735 19428 1.805 - - - 0.828 - - 0.977 - - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
30. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.777 - - - - - - 0.992 0.785 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
31. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 1.764 - - - 0.772 - - 0.992 - - chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
32. kpna2 ENSDARG00000038066 7954 1.755 - 0.921 - 0.834 - - - - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
33. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.739 - - 0.919 - - 0.820 - - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
34. arpc3 ENSDARG00000057882 10113 1.736 - - - - - 0.747 0.989 - - actin related protein 2/3 complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040625-107]
35. hars ENSDARG00000003693 7217 1.709 - - 0.908 - 0.801 - - - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
36. puf60b ENSDARG00000001241 13827 1.708 - - 0.944 0.764 - - - - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
37. hat1 ENSDARG00000034916 5712 1.706 - - 0.930 0.776 - - - - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
38. dusp11 ENSDARG00000038156 2490 1.705 - - 0.928 - 0.777 - - - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
39. nop16 ENSDARG00000044402 3645 1.702 - 0.912 - - 0.790 - - - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
40. dynll1 ENSDARG00000058454 33932 1.7 - - - - - 0.737 0.963 - - dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961]
41. CNOT2 ENSDARG00000061802 1500 1.698 - 0.903 - - 0.795 - - - - CCR4-NOT transcription complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070410-70]
42. rbm4.3 ENSDARG00000022129 28571 1.696 - - - - - - 0.950 0.746 - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
43. si:dkeyp-86f7.3 si:dkeyp-86f7.3 92941 1.693 - - 0.873 - - - - 0.820 -
44. rhoad rhoad 8007 1.686 - 0.912 - - 0.774 - - - -
45. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.683 - 0.924 - - - - - 0.759 - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
46. zgc:77262 ENSDARG00000044545 5563 1.68 - - - - 0.880 0.800 - - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
47. amot ENSDARG00000078335 1757 1.678 - 0.890 - - 0.788 - - - - angiomotin [Source:ZFIN;Acc:ZDB-GENE-030131-7487]
48. chmp2bb ENSDARG00000002190 4629 1.672 - 0.915 - - - 0.757 - - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
49. ACTN4_1 ACTN4_1 8550 1.67 - - 0.932 - 0.738 - - - -
50. rpa2 ENSDARG00000037188 4284 1.669 - - - - 0.894 0.775 - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
51. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.667 - 0.918 - - - 0.749 - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
52. smarce1 ENSDARG00000016871 9628 1.664 - - - 0.800 0.864 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
53. psmc2 ENSDARG00000020101 8095 1.663 - - 0.923 - - 0.740 - - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
54. abracl ENSDARG00000042876 10208 1.662 - - 0.922 - - 0.740 - - - ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
55. snrpb ENSDARG00000011125 11729 1.658 - - - 0.711 0.947 - - - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
56. rps27.2 ENSDARG00000055475 51081 1.647 - - - - - - 0.941 - 0.706 ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
57. farp1 ENSDARG00000074381 406 1.64 - 0.875 - - 0.765 - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
58. nova2 ENSDARG00000017673 7685 1.635 - - - 0.756 0.879 - - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
59. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 1.622 - - - 0.793 - 0.829 - - - max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
60. arhgef1b ENSDARG00000055837 2330 1.621 - 0.849 - - 0.772 - - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
61. mier1a ENSDARG00000041072 1690 1.614 - - - - 0.864 0.750 - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
62. cnn3b ENSDARG00000029856 4807 1.608 - - - 0.759 0.849 - - - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
63. rcn1 ENSDARG00000070006 8455 1.601 - 0.871 - - 0.730 - - - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
64. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.596 - - - - 0.852 - - 0.744 - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
65. tuba8l ENSDARG00000042708 48551 1.596 - - - 0.701 - - 0.895 - - tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
66. gas1a ENSDARG00000077298 10891 1.594 - - - - 0.778 0.816 - - - growth arrest-specific 1a [Source:ZFIN;Acc:ZDB-GENE-050302-155]
67. top1l ENSDARG00000070545 40529 1.594 - - - 0.851 - - - 0.743 - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
68. tcea1 ENSDARG00000003531 2912 1.593 - - - - 0.848 - - 0.745 - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
69. tle2 5014 1.591 - - - 0.751 - - - - 0.840 transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
70. wdr33 ENSDARG00000018272 4076 1.587 - - - - 0.858 - - 0.729 - WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
71. ezh2 ENSDARG00000010571 3273 1.584 - - - 0.712 0.872 - - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
72. pygma ENSDARG00000055518 15972 1.584 - - 0.882 - - 0.702 - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
73. marcksl1b ENSDARG00000035715 37390 1.579 - - - 0.759 - - - 0.820 - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
74. llgl1 ENSDARG00000009693 4205 1.575 - - - 0.734 - 0.841 - - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
75. tuba8l4 ENSDARG00000006260 44274 1.574 - - 0.809 - - 0.765 - - - tubulin, alpha 8 like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-860]
76. dhx15 ENSDARG00000015392 7496 1.572 - - - 0.725 0.847 - - - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
77. sf3b14 sf3b14 9434 1.562 - - - - 0.805 0.757 - - -
78. IM:7163548 IM:7163548 6540 1.562 - - - 0.745 - - - 0.817 -
79. zgc:110333 ENSDARG00000040628 3250 1.562 - 0.832 - - - 0.730 - - - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
80. ube2i ube2i 13024 1.56 - - - 0.771 - - - - 0.789
81. eif2s3 ENSDARG00000008292 17051 1.558 - - - - 0.854 0.704 - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
82. arid1ab ENSDARG00000101891 1722 1.541 - - - 0.702 0.839 - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
83. ilf3b ENSDARG00000105177 9473 1.539 - - - 0.800 - - - 0.739 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
84. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.536 - - - 0.714 0.822 - - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
85. bcl11ab ENSDARG00000063153 3032 1.527 - - - 0.746 - - - 0.781 - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
86. nrf1 ENSDARG00000000018 4683 1.523 - - - - - 0.766 - - 0.757 nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
87. h2afva ENSDARG00000068820 16427 1.522 - - - - - - - 0.785 0.737 H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
88. khdrbs1a ENSDARG00000052856 53666 1.52 - - - - 0.755 - - 0.765 - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
89. ep300b ENSDARG00000061108 5173 1.501 - - - 0.702 0.799 - - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
90. eif3ea ENSDARG00000090697 14670 1.475 - 0.766 - - - - - - 0.709 eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
91. apex1 ENSDARG00000045843 6345 1.46 - - - 0.711 - - - 0.749 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
92. poc1bl ENSDARG00000012745 2451 1.457 - - - - 0.750 0.707 - - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
93. efnb2a ENSDARG00000020164 5262 1.439 - - - 0.707 0.732 - - - - ephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]
94. cnot6 cnot6 7029 1.427 - - - 0.707 - - - - 0.720
95. TNRC6C_1 TNRC6C_1 6574 0.998 - - - - - - 0.998 - -
96. si:ch73-110p20.1 5932 0.998 - - - - - - 0.998 - - si:ch73-110p20.1
97. snrnp27 ENSDARG00000035625 9080 0.998 - - - - - - 0.998 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
98. tob1b ENSDARG00000021372 7048 0.997 - - - - - - 0.997 - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
99. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 0.997 - - - - - - 0.997 - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
100. fundc2 ENSDARG00000103740 3856 0.997 - - - - - - 0.997 - - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]

There are 936 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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