Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ftr56

Gene Name Gene ID Reads Annotation
ftr56 ENSDARG00000030954 23 finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]










Genes with expression patterns similar to ftr56

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ftr56 ENSDARG00000030954 23 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
2. CABZ01087025.1 ENSDARG00000117232 10 2 - 1.000 - - - - - 1.000 -
3. CABZ01079979.1 CABZ01079979.1 1 2 - 1.000 - - - - - 1.000 -
4. EVA1B EVA1B 22 1.964 - 1.000 - - - - 0.964 - -
5. FAM135B ENSDARG00000105121 207 1.835 0.972 0.863 - - - - - - - family with sequence similarity 135 member B [Source:HGNC Symbol;Acc:HGNC:28029]
6. scara3 ENSDARG00000008060 169 1.8 - 1.000 0.800 - - - - - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
7. CABZ01038708.1 CABZ01038708.1 28 1.8 - 1.000 - - - - 0.800 - -
8. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.798 0.888 - - - - - 0.910 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
9. ZNF337_4 ZNF337_4 409 1.794 0.933 - - - - - 0.861 - -
10. f3a ENSDARG00000099124, ENSDARG00000110910, ENSDARG00000116919 115 1.779 0.911 - - - - - 0.868 - - coagulation factor IIIa [Source:ZFIN;Acc:ZDB-GENE-071119-5]
11. BX323793.2 BX323793.2 61 1.763 0.763 1.000 - - - - - - -
12. mir184 48 1.754 1.000 - - 0.754 - - - - - microRNA 184
13. slc17a9a ENSDARG00000042954 36 1.745 0.984 - - 0.761 - - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
14. FAM188B FAM188B 145 1.73 - 0.758 - - - - 0.972 - -
15. bckdhb ENSDARG00000014676 17 1.729 - 0.729 - - - - - 1.000 - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
16. CABZ01058107.1 ENSDARG00000112826 8 1.729 - 0.729 - - - - 1.000 - - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
17. abca4a ENSDARG00000057169 27 1.721 - 0.729 - - - - 0.992 - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
18. crtac1a ENSDARG00000059826 22 1.712 - - 0.731 - - - 0.981 - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
19. si:dkey-10o6.2 ENSDARG00000074628 22 1.696 - - 0.848 - - - 0.848 - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
20. si:dkey-49m19.5 si:dkey-49m19.5 85 1.696 0.991 - 0.705 - - - - - -
21. zdhhc7 ENSDARG00000019484 160 1.658 0.942 - - - - - 0.716 - - zinc finger, DHHC-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-040718-346]
22. cryz ENSDARG00000016074 322 1.633 0.855 - - - - - 0.778 - - crystallin, zeta (quinone reductase) [Source:ZFIN;Acc:ZDB-GENE-050306-24]
23. thraa ENSDARG00000000151 148 1.633 0.889 0.744 - - - - - - - thyroid hormone receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-990415-263]
24. atrnl1b ENSDARG00000006420 641 1.616 0.799 - - - - - 0.817 - - attractin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8092]
25. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.602 - 0.721 - - - - 0.881 - - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
26. tdp1 ENSDARG00000073866 214 1.599 0.818 0.781 - - - - - - - tyrosyl-DNA phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-090909-1]
27. zgc:110410 ENSDARG00000055138 67 1.593 0.822 - - - - - 0.771 - - zgc:110410 [Source:ZFIN;Acc:ZDB-GENE-050522-465]
28. SACM1L_1 SACM1L_1 750 1.569 0.796 - - - - - 0.773 - -
29. C14orf80 C14orf80 20 1.568 - 0.747 0.821 - - - - - -
30. pias1b ENSDARG00000062445 538 1.559 0.736 - - - - - 0.823 - - protein inhibitor of activated STAT, 1b [Source:ZFIN;Acc:ZDB-GENE-050419-202]
31. zgc:195282 ENSDARG00000079488 475 1.543 - 0.729 - - - - 0.814 - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
32. btr02 ENSDARG00000052215 401 1.503 0.751 - - - - - 0.752 - - bloodthirsty-related gene family, member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-228]
33. SCO1 ENSDARG00000067593, ENSDARG00000113312 258 1.503 0.748 - - - - - 0.755 - - SCO1 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-140909-1]
34. BX927318.1 ENSDARG00000097713 199 1.489 - - - 0.727 - - 0.762 - -
35. si:dkeyp-51b9.3 ENSDARG00000092379 1374 1.462 0.741 0.721 - - - - - - - si:dkeyp-51b9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-469]
36. KIF2A ENSDARG00000043571 1560 1.452 0.716 - - - - - 0.736 - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
37. ADAMTSL3 ENSDARG00000027903 278 1.411 0.709 - - - - - 0.702 - - ADAMTS-like 3 [Source:ZFIN;Acc:ZDB-GENE-121030-8]
38. glra4b ENSDARG00000058103 0 1 - 1.000 - - - - - - - glycine receptor, alpha 4b [Source:ZFIN;Acc:ZDB-GENE-020402-2]
39. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - - - 1.000 - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
40. pip5k1cb ENSDARG00000100313 3 1 - - - - - - - 1.000 - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
41. ankrd45 ENSDARG00000011326 62 1 - 1.000 - - - - - - - ankyrin repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-050522-311]
42. slc2a5 ENSDARG00000077875 5 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
43. zgc:193690 34 1 - 1.000 - - - - - - - zgc:193690
44. si:ch73-334e23.1 si:ch73-334e23.1 0 1 - - - - - - - 1.000 -
45. THBS1_1 THBS1_1 6 1 1.000 - - - - - - - -
46. fancf ENSDARG00000019250 111 1 - 1.000 - - - - - - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
47. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - - - - - 1.000 - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
48. tirap ENSDARG00000074371 10 1 - - - - - - - 1.000 - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
49. DHX32 DHX32 181 1 - 1.000 - - - - - - -
50. LDLR_1 LDLR_1 0 1 - - - - - - - 1.000 -
51. eno4 ENSDARG00000070598 78 1 - 1.000 - - - - - - - enolase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-677]
52. si:ch211-186e20.2 ENSDARG00000074712 0 1 - 1.000 - - - - - - - si:ch211-186e20.2 [Source:ZFIN;Acc:ZDB-GENE-110407-8]
53. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
54. PEG3_19 PEG3_19 29 1 - 1.000 - - - - - - -
55. CR628323.3 ENSDARG00000106158 1 1 - 1.000 - - - - - - - tumor protein p53 inducible protein 3 [Source:NCBI gene;Acc:796473]
56. prph2a ENSDARG00000038018 2 1 - 1.000 - - - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
57. BX548047.2 ENSDARG00000115500 17 1 - 1.000 - - - - - - -
58. KCNK7 ENSDARG00000057331 5 1 - - - - - - 1.000 - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
59. ano8a ENSDARG00000076265 20 1 - 1.000 - - - - - - - anoctamin 8a [Source:ZFIN;Acc:ZDB-GENE-070912-583]
60. KLF10 1 1 - 1.000 - - - - - - - Kruppel-like factor 10
61. snx1b ENSDARG00000103529 4 1 - 1.000 - - - - - - - sorting nexin 1b [Source:ZFIN;Acc:ZDB-GENE-050913-82]
62. pax4 ENSDARG00000021336 29 1 - 1.000 - - - - - - - paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
63. si:ch73-44m9.3 ENSDARG00000040640, ENSDARG00000100357 3 1 - 1.000 - - - - - - - si:ch73-44m9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-290]
64. clcn1a ENSDARG00000062084 120 1 - 1.000 - - - - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
65. jam3a ENSDARG00000114589 630 1 - 1.000 - - - - - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
66. USH1G USH1G 25 1 - 1.000 - - - - - - -
67. CU928220.1 CU928220.1 146 1 - 1.000 - - - - - - -
68. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - 1.000 - - - - - - -
69. cspg5b ENSDARG00000099793 67 1 - 1.000 - - - - - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
70. CCNO 21 1 - 1.000 - - - - - - - cyclin O
71. rock2b_1 ENSDARG00000004877, ENSDARG00000096433 0 1 - - - - - - - 1.000 - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
72. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1 - 1.000 - - - - - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
73. C2CD4A ENSDARG00000061416 61 1 - 1.000 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
74. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - 1.000 - - - - - - -
75. elfn1b ENSDARG00000074372 25 1 - 1.000 - - - - - - - extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
76. crfb12 ENSDARG00000052413 47 1 1.000 - - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
77. mir30b 4 1 - 1.000 - - - - - - - microRNA 30b
78. rasl12 ENSDARG00000002701 66 1 - 1.000 - - - - - - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
79. slc18b1 ENSDARG00000044047 7 1 - 1.000 - - - - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
80. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
81. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
82. si:ch211-120c15.3 ENSDARG00000101807 19 1 - 1.000 - - - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
83. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
84. si:rp71-45g20.6 si:rp71-45g20.6 19 1 - 1.000 - - - - - - -
85. SUSD4 ENSDARG00000026335 195 1 - 1.000 - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
86. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - - - - - 1.000 -
87. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - 1.000 - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
88. ctskl ctskl 17 1 - 1.000 - - - - - - -
89. nobox 5 1 - 1.000 - - - - - - - NOBOX oogenesis homeobox
90. si:dkey-261j4.3 ENSDARG00000035151 156 1 - - - - - - - 1.000 - si:dkey-261j4.3 [Source:ZFIN;Acc:ZDB-GENE-060531-124]
91. trim35-27 ENSDARG00000035009 62 1 - 1.000 - - - - - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
92. ptger4a ENSDARG00000059236 13 1 - 1.000 - - - - - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
93. drd2a ENSDARG00000056926 40 1 - 1.000 - - - - - - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
94. si:ch211-272h9.5 ENSDARG00000092167 8 1 - 1.000 - - - - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
95. fgd5a ENSDARG00000088801 3 1 - 1.000 - - - - - - - FYVE, RhoGEF and PH domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-090428-3]
96. C1GALT1_1 C1GALT1_1 1 1 - 1.000 - - - - - - -
97. gzma ENSDARG00000090380, ENSDARG00000112472 0 1 - - - - - - - 1.000 - granzyme A [Source:ZFIN;Acc:ZDB-GENE-091204-156]
98. MTSS1L MTSS1L 7 1 - - - - - - - 1.000 -
99. APEX2 ENSDARG00000008472 7 1 - 1.000 - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
100. DBNDD1 DBNDD1 43 1 - 1.000 - - - - - - -

There are 1177 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA