Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for fscn1a

Gene Name Gene ID Reads Annotation
fscn1a ENSDARG00000059680 3999 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]










Genes with expression patterns similar to fscn1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fscn1a ENSDARG00000059680 3999 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
2. sumo3a ENSDARG00000028119 13447 3.393 - - 0.887 - - 0.865 0.817 - 0.824 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
3. elavl3 ENSDARG00000014420 8644 3.238 - 0.764 0.978 0.720 - - - 0.776 - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
4. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 3.211 - - - 0.751 - 0.778 0.789 - 0.893 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
5. hnrnpub ENSDARG00000004735 16496 3.062 - - - 0.779 - 0.794 0.768 - 0.721 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
6. hug 4100 2.678 - - 0.996 - - 0.845 - - 0.837 HuG, transcript variant X2
7. npm1b ENSDARG00000037675 5448 2.623 - - - - - 0.919 0.871 0.833 - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
8. ADAM22 ENSDARG00000060532 2259 2.524 - - - - - 0.895 - 0.763 0.866 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
9. wu:fb17g07 wu:fb17g07 10567 2.506 - - - - 0.931 - 0.780 - 0.795
10. mta2 ENSDARG00000013031 2932 2.483 - - - - - - 0.802 0.804 0.877 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
11. mex3b ENSDARG00000058369 1867 2.465 - - - - - 0.907 - 0.737 0.821 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
12. cd99l2 ENSDARG00000056722 5036 2.457 - - - 0.707 - 0.903 - - 0.847 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
13. vdac1 ENSDARG00000045132 8051 2.454 - - - - - 0.752 0.879 - 0.823 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
14. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 2.452 - - 0.920 - - 0.740 0.792 - - tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
15. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.443 - - - 0.745 - 0.833 - - 0.865 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
16. tuba1c ENSDARG00000055216 8384 2.439 - - - - - 0.781 - 0.805 0.853 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
17. khsrp ENSDARG00000026489 15738 2.438 - - - - - 0.849 0.738 - 0.851 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
18. ptbp2b ENSDARG00000015901 2458 2.426 - 0.848 - - - 0.849 0.729 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
19. si:ch73-21g5.7 ENSDARG00000093156 9412 2.42 - - - - - 0.896 - 0.768 0.756 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
20. syncripl ENSDARG00000026723 3889 2.419 - 0.797 - - - - 0.753 - 0.869 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
21. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.418 - - - 0.754 - - 0.859 - 0.805 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
22. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 2.4 - - - 0.737 - - 0.797 0.866 - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
23. uhrf1 ENSDARG00000103409 3282 2.399 - 0.813 - - - 0.732 - - 0.854 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
24. rangap1a ENSDARG00000041317 1456 2.385 - 0.803 - - - 0.795 0.787 - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
25. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.379 - - - 0.762 - 0.907 - - 0.710 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
26. her4.1 ENSDARG00000056732 1264 2.379 - - - - - 0.737 - 0.758 0.884 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
27. insm1a ENSDARG00000091756 1838 2.378 - - - 0.732 - - - 0.798 0.848 insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
28. tox4 tox4 1671 2.372 0.727 - - - - 0.838 - - 0.807
29. smarce1 ENSDARG00000016871 9628 2.368 - - - - - 0.765 0.790 0.813 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
30. srsf6b ENSDARG00000016783 9926 2.366 - - - - - 0.750 0.753 - 0.863 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
31. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.363 - - - 0.732 - 0.820 - - 0.811 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
32. srsf2b ENSDARG00000103893 1437 2.358 - 0.835 - - - - 0.755 0.768 - serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]
33. hmgb3a ENSDARG00000056725 15668 2.357 - - - - - 0.763 0.740 - 0.854 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
34. ephb3a ENSDARG00000031548 1872 2.343 - - - 0.748 - - - 0.728 0.867 eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
35. cdc34b ENSDARG00000012627 3879 2.342 - - - - - - 0.783 0.710 0.849 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
36. lhx5 ENSDARG00000057936 785 2.342 - - - - - 0.843 - 0.759 0.740 LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
37. llgl1 ENSDARG00000009693 4205 2.337 - 0.750 - - - - 0.792 - 0.795 lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
38. TMEM57 TMEM57 260 2.334 - - - - - 0.853 - 0.781 0.700
39. lfng ENSDARG00000037879 11783 2.32 - - - 0.782 - 0.700 - - 0.838 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
40. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.318 - - - 0.784 - - - 0.826 0.708 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
41. eif3i ENSDARG00000017445 21149 2.317 - - 0.757 - 0.850 - - - 0.710 eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]
42. rbm28 ENSDARG00000025332 2685 2.314 - 0.785 - - - 0.797 0.732 - - RNA binding motif protein 28 [Source:ZFIN;Acc:ZDB-GENE-040426-960]
43. fam60al 2846 2.306 - - - - - 0.844 0.736 0.726 - family with sequence similarity 60, member A, like
44. smarcd1 ENSDARG00000019004 6028 2.3 - - - 0.813 - 0.700 - - 0.787 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
45. lypla2 ENSDARG00000053656 8971 2.293 - - - - - 0.727 0.754 - 0.812 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
46. arhgef2 ENSDARG00000075819 2173 2.281 - - - - - 0.776 - 0.786 0.719 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
47. supt6h ENSDARG00000006524 3221 2.281 - - - - - - 0.710 0.762 0.809 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
48. ZFHX3 ENSDARG00000103057 7759 2.28 - - - 0.716 - 0.807 - 0.757 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
49. celf3a ENSDARG00000034668 2432 2.272 - - - - - 0.782 - 0.783 0.707 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
50. top1l ENSDARG00000070545 40529 2.257 - - - 0.778 - - 0.737 0.742 - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
51. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.241 - - - 0.737 - - - 0.789 0.715 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
52. TNRC6B ENSDARG00000074161 2464 2.177 - - - - - 0.750 - 0.716 0.711 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
53. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 1.905 - - 0.993 - - - 0.912 - - exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
54. MON2 ENSDARG00000099798 2359 1.879 - - 0.987 - - 0.892 - - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
55. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.869 - - 0.993 - - 0.876 - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
56. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 1.817 - - 0.984 - - 0.833 - - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
57. stmn1b ENSDARG00000033655 9491 1.813 - - - - - 0.894 - - 0.919 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
58. PEG3_5 PEG3_5 1624 1.803 - - 0.994 - - 0.809 - - -
59. snrpe ENSDARG00000033175 7462 1.79 - - 0.939 - - - - 0.851 - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
60. g3bp1 ENSDARG00000017741 7622 1.754 - - 0.901 - - - 0.853 - - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
61. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 1.748 - - 0.991 - - - 0.757 - - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
62. plp1a ENSDARG00000103732 3544 1.747 - - - - - 0.881 - - 0.866 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
63. prpf4bb ENSDARG00000040310 2260 1.733 - 0.921 - - - - - - 0.812 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
64. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.725 - - - - - 0.883 - 0.842 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
65. fkbp7 ENSDARG00000010962 2986 1.724 - 0.754 0.970 - - - - - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
66. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.721 - - 0.798 - - 0.923 - - - eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
67. ptcd3 ENSDARG00000103856 2107 1.719 - - 0.992 - - - 0.727 - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
68. stox2a ENSDARG00000070162 1620 1.719 - - - - - 0.902 0.817 - - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
69. pip5k1aa ENSDARG00000100396 1644 1.717 - - 0.994 - - - 0.723 - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
70. TACC2 1702 1.713 - - 0.992 - - - - 0.721 - transforming, acidic coiled-coil containing protein 2, transcript variant X17
71. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.711 - - - - - 0.919 - - 0.792 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
72. myt1b ENSDARG00000102879 5411 1.704 - - - - - 0.794 - - 0.910 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
73. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.702 - - - - - 0.840 - - 0.862 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
74. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.702 - - - - - 0.930 - - 0.772 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
75. nrn1a ENSDARG00000071860 1311 1.701 - - - - - 0.864 - - 0.837 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
76. nrarpb ENSDARG00000018958 6225 1.697 - - 0.914 - - 0.783 - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
77. psma3 ENSDARG00000086618 6200 1.693 - - 0.978 - - - - 0.715 - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
78. tmsb ENSDARG00000054911 6411 1.692 - - - - - 0.823 - - 0.869 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
79. her15.2 her15.2 1701 1.691 - - - - - 0.904 - - 0.787
80. mdkb ENSDARG00000020708 5393 1.69 - - - - - 0.910 - - 0.780 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
81. abi2b ENSDARG00000014875 2259 1.687 - - - - - 0.902 - - 0.785 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
82. hnrnpm ENSDARG00000061735 19428 1.686 - - - 0.806 - - - - 0.880 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
83. FAM126B 588 1.685 - 0.882 - - - 0.803 - - - family with sequence similarity 126 member B
84. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.685 - - - - - 0.844 - 0.841 -
85. hoxc6b ENSDARG00000101954 967 1.679 - - - - - 0.851 0.828 - - homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]
86. u2af2b ENSDARG00000011740 6946 1.678 - - - - - - 0.841 - 0.837 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
87. rcor2 ENSDARG00000008278 1678 1.677 - - - - - 0.855 - 0.822 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
88. st18 663 1.676 - - - - - 0.888 - 0.788 - suppression of tumorigenicity 18, zinc finger
89. ipo7 ENSDARG00000035751 7095 1.674 - - 0.929 - - - 0.745 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
90. stmn2a ENSDARG00000033234 2272 1.674 - - - - - 0.877 - - 0.797 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
91. cnrip1a ENSDARG00000091683 1491 1.669 - - - - - 0.900 - 0.769 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
92. tmem47 ENSDARG00000057322 4691 1.669 - - - - 0.895 0.774 - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
93. txnl4a ENSDARG00000036190 2048 1.667 - - - - - - 0.886 - 0.781 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
94. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.664 - - - - - 0.904 - 0.760 - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
95. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.663 - - - - - 0.804 - - 0.859 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
96. nova2 ENSDARG00000017673 7685 1.66 - - - 0.755 - - - - 0.905 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
97. C7H4orf48 C7H4orf48 1455 1.653 - - - - - 0.895 - 0.758 -
98. rbms3 ENSDARG00000044574 2514 1.652 - - - - - 0.829 0.823 - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
99. DACT3_1 DACT3_1 1235 1.649 - - - - - 0.885 - 0.764 -
100. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.649 - - - - - 0.896 0.753 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]

There are 2312 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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