Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for frem3

Gene Name Gene ID Reads Annotation
frem3 ENSDARG00000074677, ENSDARG00000111196, ENSDARG00000114207 2326 Fras1 related extracellular matrix 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9788]










Genes with expression patterns similar to frem3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. frem3 ENSDARG00000074677, ENSDARG00000111196, ENSDARG00000114207 2326 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Fras1 related extracellular matrix 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9788]
2. igf1rb ENSDARG00000034434, ENSDARG00000110935 813 1.921 - 0.995 0.926 - - - - - - insulin-like growth factor 1b receptor [Source:ZFIN;Acc:ZDB-GENE-020503-2]
3. hoxa5a ENSDARG00000102501 1667 1.905 - 0.994 0.911 - - - - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
4. b3gnt2b ENSDARG00000091902 4125 1.837 - 0.923 0.914 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
5. BX511245.1 ENSDARG00000096871 7523 1.834 - 0.950 0.884 - - - - - -
6. axin1 ENSDARG00000102964 1710 1.812 - 0.990 0.822 - - - - - - axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
7. ccng2 ENSDARG00000017602 3141 1.782 - 0.996 0.786 - - - - - - cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
8. TRIP10 TRIP10 1079 1.769 - - 0.916 - - - - 0.853 -
9. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 1.763 - 0.997 0.766 - - - - - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
10. si:dkey-193p11.2 ENSDARG00000096712 3500 1.75 - 0.965 0.785 - - - - - - si:dkey-193p11.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8407]
11. bambia ENSDARG00000055381 2922 1.735 - 0.968 - - - 0.767 - - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
12. fam133b ENSDARG00000013863 5070 1.714 - 0.992 0.722 - - - - - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
13. ankrd50l ENSDARG00000007077 1115 1.713 - - - - - 0.867 - 0.846 - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
14. frem2a ENSDARG00000076856 11022 1.696 - 0.821 0.875 - - - - - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
15. serpinh1b ENSDARG00000019949 11693 1.695 - 0.993 - - 0.702 - - - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
16. hsd17b14 ENSDARG00000054842 1394 1.682 - - 0.909 - - - - 0.773 - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
17. rnf183 ENSDARG00000068851 2427 1.681 - 0.970 - - - - - 0.711 - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
18. utp23 ENSDARG00000105012 1346 1.667 - - - - - 0.826 - 0.841 - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
19. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.664 - - 0.799 - - - - 0.865 - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
20. trappc2 ENSDARG00000097660 760 1.659 - - 0.898 - - 0.761 - - - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
21. fbxo30a ENSDARG00000058561 867 1.658 - - 0.890 - - - - 0.768 - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
22. lmnb2 ENSDARG00000101624 11304 1.647 - 0.918 - - - 0.729 - - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
23. itgb1bp1 ENSDARG00000007169 2723 1.639 - 0.921 - - - - 0.718 - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
24. CT583728.14 ENSDARG00000112295 911 1.622 - - - - - 0.786 - 0.836 -
25. atp10a ENSDARG00000061039, ENSDARG00000110280 869 1.606 - - 0.861 - - 0.745 - - - ATPase phospholipid transporting 10A [Source:ZFIN;Acc:ZDB-GENE-101102-1]
26. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.604 - - 0.857 - - - - 0.747 - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
27. CR382298.2 CR382298.2 1083 1.573 - - 0.830 - - - - 0.743 -
28. calrl calrl 16799 1.549 - - 0.818 - - 0.731 - - -
29. ankrd13c ENSDARG00000103831 3593 1.52 - - 0.725 - - 0.795 - - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
30. kank1 kank1 2430 1.517 - 0.810 - - - - - 0.707 -
31. FAM3D ENSDARG00000091625 1392 1.513 - - - - - 0.722 0.791 - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
32. ppp3cca ENSDARG00000014962, ENSDARG00000112030 1301 1.46 0.706 - 0.754 - - - - - - protein phosphatase 3, catalytic subunit, gamma isozyme, a [Source:ZFIN;Acc:ZDB-GENE-030829-36]
33. calcoco1 calcoco1 1060 1.434 0.713 - - - - 0.721 - - -
34. ddx6 ENSDARG00000061338 2514 0.996 - 0.996 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
35. PPFIBP1_1 PPFIBP1_1 2256 0.996 - 0.996 - - - - - - -
36. arl2 ENSDARG00000069496, ENSDARG00000112191 1389 0.996 - 0.996 - - - - - - - ADP-ribosylation factor-like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-19]
37. stim1a ENSDARG00000060723 1200 0.995 - 0.995 - - - - - - - stromal interaction molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-914]
38. FAM195A FAM195A 1134 0.995 - 0.995 - - - - - - -
39. klhl20 ENSDARG00000038801 936 0.995 - 0.995 - - - - - - - kelch-like family member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1935]
40. ap2b1 ENSDARG00000035152 2912 0.995 - 0.995 - - - - - - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
41. sema3gb ENSDARG00000013607 1531 0.995 - 0.995 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
42. glo1 ENSDARG00000068978 1384 0.995 - 0.995 - - - - - - - glyoxalase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-9]
43. prkcea ENSDARG00000003008 1118 0.995 - 0.995 - - - - - - - protein kinase C, epsilon a [Source:ZFIN;Acc:ZDB-GENE-030131-8191]
44. cnn3b ENSDARG00000029856 4807 0.995 - 0.995 - - - - - - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
45. ddr2l ENSDARG00000103830 1921 0.995 - 0.995 - - - - - - - discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
46. naa15b ENSDARG00000030368 535 0.995 - 0.995 - - - - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-6031]
47. calm2b 3890 0.995 - 0.995 - - - - - - - calmodulin 2b, (phosphorylase kinase, delta)
48. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.995 - 0.995 - - - - - - - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
49. myo9al1 myo9al1 1194 0.995 - 0.995 - - - - - - -
50. znf740 znf740 2458 0.995 - 0.995 - - - - - - -
51. cdipt ENSDARG00000070686 1318 0.995 - 0.995 - - - - - - - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
52. cenpe ENSDARG00000063385 4428 0.995 - 0.995 - - - - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
53. cnot11 ENSDARG00000068596 829 0.995 - 0.995 - - - - - - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
54. PRKAG2 PRKAG2 688 0.995 - 0.995 - - - - - - -
55. si:ch211-87l2.1 si:ch211-87l2.1 2403 0.995 - 0.995 - - - - - - -
56. uqcrfs1 ENSDARG00000007745 4654 0.994 - 0.994 - - - - - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
57. fam192a ENSDARG00000041631 4113 0.994 - 0.994 - - - - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
58. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 0.994 - 0.994 - - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
59. zgc:110191 zgc:110191 359 0.994 - 0.994 - - - - - - -
60. rarga ENSDARG00000034117 1238 0.994 - 0.994 - - - - - - - retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
61. lsm1 ENSDARG00000043177 767 0.994 - 0.994 - - - - - - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
62. recql ENSDARG00000007175 501 0.994 - 0.994 - - - - - - - RecQ helicase-like [Source:ZFIN;Acc:ZDB-GENE-050809-134]
63. crabp2a ENSDARG00000073978 868 0.994 - 0.994 - - - - - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
64. fitm2 ENSDARG00000034568, ENSDARG00000112035 1717 0.994 - 0.994 - - - - - - - fat storage-inducing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-050508-5]
65. tnfaip1 ENSDARG00000041565, ENSDARG00000113688, ENSDARG00000115018 553 0.994 - 0.994 - - - - - - - tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:ZFIN;Acc:ZDB-GENE-030131-5610]
66. si:ch211-251b21.1 ENSDARG00000007275 15724 0.994 - 0.994 - - - - - - - si:ch211-251b21.1 [Source:ZFIN;Acc:ZDB-GENE-060809-5]
67. ogfr ENSDARG00000037837 1001 0.994 - 0.994 - - - - - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
68. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 0.994 - 0.994 - - - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
69. txndc9 ENSDARG00000069853, ENSDARG00000110688 1519 0.994 - 0.994 - - - - - - - thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]
70. RMDN2 ENSDARG00000078761 717 0.994 - 0.994 - - - - - - - regulator of microtubule dynamics 2 [Source:ZFIN;Acc:ZDB-GENE-111223-1]
71. ergic2 ENSDARG00000051936, ENSDARG00000111918 798 0.994 - 0.994 - - - - - - - ERGIC and golgi 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1331]
72. dido1 ENSDARG00000057940 3819 0.994 - 0.994 - - - - - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
73. hic1 ENSDARG00000055493 219 0.994 - 0.994 - - - - - - - hypermethylated in cancer 1 [Source:ZFIN;Acc:ZDB-GENE-040713-2]
74. lix1l ENSDARG00000063244 2061 0.994 - 0.994 - - - - - - - limb and CNS expressed 1 like [Source:ZFIN;Acc:ZDB-GENE-060503-777]
75. capn1a ENSDARG00000052702 1123 0.994 - 0.994 - - - - - - - calpain 1, (mu/I) large subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-1263]
76. brca2 ENSDARG00000079015 410 0.994 - 0.994 - - - - - - - breast cancer 2, early onset [Source:ZFIN;Acc:ZDB-GENE-060510-3]
77. si:ch211-13f8.1 ENSDARG00000093342 274 0.994 - 0.994 - - - - - - - si:ch211-13f8.1 [Source:ZFIN;Acc:ZDB-GENE-061207-4]
78. plp1a ENSDARG00000103732 3544 0.994 - 0.994 - - - - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
79. rab8b ENSDARG00000068628, ENSDARG00000111270, ENSDARG00000114110 607 0.994 - 0.994 - - - - - - - RAB8B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070620-16]
80. tert ENSDARG00000042637 463 0.994 - 0.994 - - - - - - - telomerase reverse transcriptase [Source:ZFIN;Acc:ZDB-GENE-080405-1]
81. tmem181 ENSDARG00000045910 2288 0.993 - 0.993 - - - - - - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
82. col4a1 ENSDARG00000055009 3083 0.993 - 0.993 - - - - - - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
83. plagx ENSDARG00000036855 3768 0.993 - 0.993 - - - - - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
84. ms4a17a.7 ENSDARG00000043796 352 0.993 - 0.993 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.7 [Source:ZFIN;Acc:ZDB-GENE-080829-2]
85. CABZ01061717.1 CABZ01061717.1 320 0.993 - 0.993 - - - - - - -
86. zgc:77158 ENSDARG00000013784 634 0.993 - 0.993 - - - - - - - zgc:77158 [Source:ZFIN;Acc:ZDB-GENE-040426-1799]
87. eif5 ENSDARG00000003681 7986 0.993 - 0.993 - - - - - - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
88. MAF1 ENSDARG00000013122 6899 0.993 - 0.993 - - - - - - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
89. AKAP2 AKAP2 4178 0.993 - 0.993 - - - - - - -
90. SFT2D2_1 SFT2D2_1 219 0.993 - 0.993 - - - - - - -
91. lbx1a ENSDARG00000018321 634 0.993 - 0.993 - - - - - - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
92. pigp ENSDARG00000038805 611 0.993 - 0.993 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class P [Source:ZFIN;Acc:ZDB-GENE-030131-4041]
93. mrp63 mrp63 2500 0.993 - 0.993 - - - - - - -
94. hnrnpul1 ENSDARG00000040564 6550 0.992 - 0.992 - - - - - - - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
95. abcb7 ENSDARG00000062795 1404 0.992 - 0.992 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
96. glrx5 ENSDARG00000043665 2687 0.992 - 0.992 - - - - - - - glutaredoxin 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1957]
97. znf259 znf259 1819 0.992 - 0.992 - - - - - - -
98. tfe3a ENSDARG00000098903 1530 0.992 - 0.992 - - - - - - - transcription factor binding to IGHM enhancer 3a [Source:ZFIN;Acc:ZDB-GENE-010919-2]
99. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 0.992 - 0.992 - - - - - - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
100. thoc2 ENSDARG00000037503 8711 0.992 - 0.992 - - - - - - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]

There are 997 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA