Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for fras1

Gene Name Gene ID Reads Annotation
fras1 ENSDARG00000054619, ENSDARG00000114204 4459 Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]










Genes with expression patterns similar to fras1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
2. and3 ENSDARG00000056873 22650 3.381 - - - 0.726 - 0.888 0.840 0.927 - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
3. si:dkey-193c22.2 ENSDARG00000076735 2791 2.591 - - 0.993 - - 0.718 0.880 - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
4. vcanb ENSDARG00000009401 3611 2.568 - - - - - 0.924 0.915 0.729 - versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
5. and1 ENSDARG00000088514 37603 2.546 - - - - - 0.919 0.832 - 0.795 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
6. zgc:92061 zgc:92061 21304 2.53 - 0.949 - - - 0.751 0.830 - -
7. lamb1a ENSDARG00000101209 5396 2.348 - - - - - 0.761 0.795 - 0.792 laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
8. rgs12b ENSDARG00000036774 5088 2.235 - - - - - 0.719 0.758 - 0.758 regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
9. arl4ca ENSDARG00000057606 4686 2.183 - - - - - - 0.721 0.758 0.704 ADP-ribosylation factor-like 4Ca [Source:ZFIN;Acc:ZDB-GENE-050417-265]
10. KRTCAP2 ENSDARG00000070386 10103 1.857 - 0.980 - - - - 0.877 - - keratinocyte associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-060825-91]
11. fryl ENSDARG00000040001 3256 1.841 - - 0.990 - - - - - 0.851 furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
12. eppk1 ENSDARG00000096359 4315 1.84 - - 0.990 - - - 0.850 - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
13. tmeff1b ENSDARG00000056740 11253 1.823 - 0.846 0.977 - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
14. si:dkey-240e12.6 ENSDARG00000110137 674 1.776 - - 0.989 - - - 0.787 - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
15. itgb1bp1 ENSDARG00000007169 2723 1.774 - - 0.986 - - - 0.788 - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
16. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.773 - - - - - 0.872 0.901 - - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
17. smg8 ENSDARG00000061378 1164 1.769 - 0.998 - - - - 0.771 - - SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]
18. slc25a36b ENSDARG00000015915 1750 1.766 - 0.998 - - - 0.768 - - - solute carrier family 25 (pyrimidine nucleotide carrier ), member 36b [Source:ZFIN;Acc:ZDB-GENE-080219-28]
19. tfap2c ENSDARG00000040606 4628 1.762 - - - - - - 0.806 - 0.956 transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
20. abhd4 ENSDARG00000102887 748 1.758 - - 0.988 - - - 0.770 - - abhydrolase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-83]
21. acy3.2 ENSDARG00000005525 6441 1.756 - - 0.881 - - - - 0.875 - aspartoacylase (aminocyclase) 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040718-37]
22. si:dkey-253d23.10 7602 1.754 - - 0.960 - - - 0.794 - - si:dkey-253d23.10, transcript variant X4
23. abce1 ENSDARG00000007216 7502 1.75 - 0.961 - - - - - - 0.789 ATP-binding cassette, sub-family E (OABP), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1995]
24. TRIM35_10 TRIM35_10 484 1.745 - - 0.990 - - - 0.755 - -
25. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 1.722 - 0.860 0.862 - - - - - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
26. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 1.719 - - 0.890 - - - 0.829 - - platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
27. frem1a ENSDARG00000069473 1847 1.718 - - - - - 0.956 - 0.762 - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
28. MAL 9331 1.715 - 0.865 - - - - 0.850 - - mal, T-cell differentiation protein
29. WIPF2 WIPF2 3171 1.714 - - - - - 0.782 - - 0.932
30. itgb1b.1 ENSDARG00000053232 4721 1.713 - - 0.986 - - - 0.727 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
31. bambia ENSDARG00000055381 2922 1.709 - - - - - 0.829 0.880 - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
32. CPAMD8 ENSDARG00000056530 3481 1.708 - - - - - 0.889 0.819 - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
33. capn2l ENSDARG00000034211, ENSDARG00000111153 3858 1.698 - - - - - - 0.877 0.821 - calpain 2, (m/II) large subunit, like [Source:ZFIN;Acc:ZDB-GENE-050417-341]
34. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 1.696 - - 0.953 - - - 0.743 - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
35. cebpd ENSDARG00000087303 2195 1.696 - - - - - 0.880 0.816 - - CCAAT enhancer binding protein delta [Source:ZFIN;Acc:ZDB-GENE-020111-4]
36. CR954963.1 ENSDARG00000097153 1135 1.696 - - 0.989 - - - 0.707 - -
37. timp2a ENSDARG00000061226, ENSDARG00000114336 1756 1.676 - - 0.892 - - - - 0.784 - TIMP metallopeptidase inhibitor 2a [Source:ZFIN;Acc:ZDB-GENE-030612-1]
38. wdr45 ENSDARG00000090219 829 1.674 - - 0.972 - - 0.702 - - - WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
39. sp9 ENSDARG00000099374 2266 1.671 - - - - - 0.928 - - 0.743 sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
40. lpar2b ENSDARG00000042561 1086 1.667 - - - - - 0.759 0.908 - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
41. sepw1 17630 1.665 - - 0.865 - - - - 0.800 - selenoprotein W, 1
42. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1.654 - - - - - 0.798 0.856 - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
43. cldne ENSDARG00000043128 6960 1.651 - - - 0.740 - - - 0.911 - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
44. arhgef25b ENSDARG00000014465 669 1.643 - - - - - - 0.875 - 0.768 Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
45. s100u ENSDARG00000071014 4754 1.642 - - - - - - 0.793 - 0.849 S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
46. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 1.63 - - - - - 0.734 0.896 - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
47. vcana ENSDARG00000103515 611 1.621 - - - - - 0.761 0.860 - - versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
48. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.609 0.761 - - - - 0.848 - - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
49. galnt12 ENSDARG00000055490 1653 1.608 - - - - - - 0.849 - 0.759 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
50. ajuba ENSDARG00000077842 1152 1.598 - - - - - - 0.848 - 0.750 ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
51. itih5 ENSDARG00000045517 374 1.597 - - - - - 0.814 0.783 - - inter-alpha-trypsin inhibitor heavy chain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-193]
52. cnstb ENSDARG00000042759 105 1.597 - - - - - 0.849 0.748 - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
53. FP067396.1 FP067396.1 32149 1.595 - - 0.891 - - - - 0.704 -
54. col14a1a ENSDARG00000005762 4778 1.58 - - - - - 0.762 - - 0.818 collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
55. CR388068.1 CR388068.1 481 1.577 - - - - - 0.726 0.851 - -
56. pdxdc1 ENSDARG00000101886 1958 1.575 - - - - - - 0.807 0.768 - pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
57. si:ch211-250c4.3 si:ch211-250c4.3 677 1.572 - - - - - 0.735 0.837 - -
58. sept9a ENSDARG00000020235 6881 1.568 - - - - - 0.866 - - 0.702 septin 9a [Source:ZFIN;Acc:ZDB-GENE-030131-9187]
59. si:dkey-56e3.2 ENSDARG00000092551 835 1.566 - - - - - - 0.822 0.744 - si:dkey-56e3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-316]
60. mia2 ENSDARG00000099973 139 1.565 - - - - - 0.831 0.734 - - MIA SH3 domain ER export factor 2 [Source:ZFIN;Acc:ZDB-GENE-100618-1]
61. zc3h7b 2936 1.564 - - - - - - 0.721 - 0.843 zinc finger CCCH-type containing 7B
62. nt5c1bb ENSDARG00000033742 1248 1.562 - - - - - 0.820 0.742 - - 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
63. calua ENSDARG00000045676 16674 1.559 - 0.846 - 0.713 - - - - - calumenin a [Source:ZFIN;Acc:ZDB-GENE-040625-166]
64. krt8 ENSDARG00000058358, ENSDARG00000109279 85624 1.558 - - - - - - - 0.793 0.765 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
65. slc38a6 ENSDARG00000054312 112 1.556 - - - - - 0.801 0.755 - - solute carrier family 38, member 6 [Source:ZFIN;Acc:ZDB-GENE-050522-51]
66. wu:fb17f05 wu:fb17f05 13622 1.554 - - - - - 0.810 0.744 - -
67. gpx7 ENSDARG00000091511 3045 1.549 - - - - - - 0.714 - 0.835 glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
68. NID2 NID2 5282 1.547 - - - - - 0.804 0.743 - -
69. irs1 ENSDARG00000054087 1809 1.54 - - - - - 0.820 - - 0.720 insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
70. ostc ENSDARG00000104901 16240 1.537 - - 0.754 - - - - - 0.783 oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
71. si:ch73-73d17.3 si:ch73-73d17.3 925 1.529 0.764 - - - - - - - 0.765
72. tmem176l.4 ENSDARG00000074390 1886 1.529 - - - - - 0.762 - - 0.767 transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
73. col4a4 ENSDARG00000002831 803 1.529 - - - - 0.711 0.818 - - - collagen, type IV, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-101001-1]
74. rpl23a ENSDARG00000006316 59831 1.524 - 0.769 0.755 - - - - - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
75. si:rp71-3c13.3 si:rp71-3c13.3 128 1.511 - - - - - 0.718 0.793 - -
76. zgc:91985 zgc:91985 1517 1.509 - - - - - - 0.758 - 0.751
77. arhgap12a ENSDARG00000008548 757 1.508 - - - - - 0.789 0.719 - - Rho GTPase activating protein 12a [Source:ZFIN;Acc:ZDB-GENE-050809-38]
78. slc39a7 ENSDARG00000104451 6368 1.503 - - - - - - - 0.726 0.777 solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
79. sult6b1 ENSDARG00000086826 2070 1.503 - - - - - 0.706 0.797 - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
80. lmo7a ENSDARG00000004930 2414 1.502 0.754 - - - - - 0.748 - - LIM domain 7a [Source:ZFIN;Acc:ZDB-GENE-030219-74]
81. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.499 - - - - - - 0.747 - 0.752 glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
82. fbxo28 ENSDARG00000027159 9602 1.498 - - - - - 0.745 0.753 - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
83. abca1a ENSDARG00000074635 1085 1.498 0.751 - - - - - 0.747 - - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
84. tmem170a ENSDARG00000056628, ENSDARG00000111549 737 1.497 - - - - - - 0.739 - 0.758 transmembrane protein 170A [Source:ZFIN;Acc:ZDB-GENE-040426-1622]
85. zgc:113442 ENSDARG00000101906 3092 1.496 - - - - - - 0.754 - 0.742 zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
86. map3k3 ENSDARG00000060348 1482 1.491 - - - - - - 0.729 - 0.762 mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
87. lig4 ENSDARG00000060620 369 1.491 - - - - - 0.759 0.732 - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
88. SAYSD1 SAYSD1 149 1.491 - - - - - 0.733 0.758 - -
89. col18a1 col18a1 20555 1.49 - - - - - - 0.759 - 0.731
90. pnkd ENSDARG00000071032 447 1.489 - - - - - 0.721 0.768 - - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
91. magt1 ENSDARG00000058062 3903 1.487 - - - - - - 0.752 - 0.735 magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
92. epn1 ENSDARG00000010411 725 1.481 0.703 - - - - - 0.778 - - epsin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2680]
93. chl1a ENSDARG00000077881 1488 1.48 - - - - - 0.778 0.702 - - cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
94. he2 945 1.48 - - - - - 0.772 0.708 - - hatching enzyme 2
95. tln1 ENSDARG00000100729 5744 1.479 - - - 0.742 - - - - 0.737 talin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-48]
96. prrc1 ENSDARG00000044304 1567 1.476 - - - - - 0.753 0.723 - - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
97. chek2 ENSDARG00000025820, ENSDARG00000115597 77 1.475 - - - - - 0.746 0.729 - - checkpoint kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8942]
98. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 1.474 - - - - - - 0.721 - 0.753 coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
99. tax1bp3 ENSDARG00000059177 4324 1.469 0.755 - - - - 0.714 - - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
100. zgc:101000 zgc:101000 9041 1.469 - - - - 0.723 - - 0.746 -

There are 1458 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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