Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for foxred2

Gene Name Gene ID Reads Annotation
foxred2 ENSDARG00000061354 718 FAD-dependent oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1026]










Genes with expression patterns similar to foxred2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxred2 ENSDARG00000061354 718 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 FAD-dependent oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1026]
2. hdac10 ENSDARG00000086458 676 1.78 - - - - - - 0.831 - 0.949 histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
3. CR678040.1 CR678040.1 117 1.734 - - - - 0.775 - - - 0.959
4. phf10 ENSDARG00000070084 1210 1.731 - 0.834 - - - - - - 0.897 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
5. RNPEPL1 ENSDARG00000007813 557 1.723 - 0.787 - - - - - - 0.936 arginyl aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5522]
6. ankzf1 ENSDARG00000041904 917 1.721 - - - - - - 0.782 - 0.939 ankyrin repeat and zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-80]
7. nsun2 ENSDARG00000056665 740 1.709 - - - - - - - 0.757 0.952 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
8. tspan5b ENSDARG00000070449 1056 1.709 - - - - - - - 0.769 0.940 tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
9. GANAB_1 GANAB_1 685 1.685 - 0.731 - - - - - - 0.954
10. mrps2 ENSDARG00000103198 2410 1.678 - - - - - - - 0.852 0.826 mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
11. adipor1a ENSDARG00000002912, ENSDARG00000113136 796 1.664 - - - - - - - 0.801 0.863 adiponectin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-169]
12. tom1 ENSDARG00000104581 1457 1.65 - - - - - - 0.868 - 0.782 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
13. tpst1 ENSDARG00000073872 2490 1.647 - - - - - - 0.748 - 0.899 tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
14. morc2 ENSDARG00000028539 3259 1.647 - - - - - - 0.778 - 0.869 MORC family CW-type zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-040822-40]
15. ipo13 ENSDARG00000060618 827 1.643 - - - - - - 0.740 - 0.903 importin 13 [Source:ZFIN;Acc:ZDB-GENE-070706-1]
16. rbpms2b ENSDARG00000079578 436 1.639 0.722 - - - - - - - 0.917 RNA binding protein, mRNA processing factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-741]
17. srpr 5148 1.635 - - - - - - 0.791 - 0.844 signal recognition particle receptor (docking protein)
18. FAM3D ENSDARG00000091625 1392 1.617 - - - - - - 0.707 - 0.910 family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
19. ubl3b ENSDARG00000021556 1210 1.61 - 0.716 - - - - - - 0.894 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
20. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.608 0.749 - - - - - - - 0.859 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
21. si:dkey-15h8.15 ENSDARG00000102601 335 1.591 - 0.703 - - - - - 0.888 - si:dkey-15h8.15 [Source:ZFIN;Acc:ZDB-GENE-050208-626]
22. slc45a4 ENSDARG00000077326 481 1.581 - 0.864 - - - - 0.717 - - solute carrier family 45, member 4 [Source:ZFIN;Acc:ZDB-GENE-091230-5]
23. ezrb ENSDARG00000025091 2861 1.574 - - - - - - 0.722 - 0.852 ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
24. btbd3b ENSDARG00000087517 107 1.573 - - - - 0.714 - - 0.859 - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
25. mtmr9 ENSDARG00000015860 1339 1.552 - 0.834 - - - - 0.718 - - myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
26. abi2a ENSDARG00000058207, ENSDARG00000111927 2574 1.548 - 0.719 - - - - 0.829 - - abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]
27. SHKBP1 ENSDARG00000105050 1139 1.52 - 0.796 - - - - 0.724 - - SH3KBP1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19214]
28. si:ch1073-396h14.1 ENSDARG00000057590 503 1.517 - 0.807 - - - - 0.710 - - si:ch1073-396h14.1 [Source:ZFIN;Acc:ZDB-GENE-070705-6]
29. abhd5a 130 1.509 - 0.765 - - 0.744 - - - - abhydrolase domain containing 5a, transcript variant X1
30. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.498 - 0.744 - - - - - - 0.754 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
31. dazap2 ENSDARG00000007867 1805 1.489 - - - - - - 0.707 - 0.782 DAZ associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3036]
32. PPM1J ENSDARG00000074690 109 1.486 - 0.766 - - 0.720 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
33. scamp4 ENSDARG00000010531, ENSDARG00000114792 1143 1.481 - 0.769 - - - - 0.712 - - secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]
34. crfb4 ENSDARG00000068711 51 1.48 - 0.731 - - 0.749 - - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
35. col12a1a ENSDARG00000078322 1833 1.478 0.705 - - - - - - - 0.773 collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
36. pdgfaa ENSDARG00000109371, ENSDARG00000110069, ENSDARG00000115665 2120 1.47 - - - - - - 0.756 0.714 - platelet-derived growth factor alpha polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030918-2]
37. setd5 ENSDARG00000078576 1974 1.463 - 0.706 - - - - - - 0.757 SET domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080523-1]
38. dnmbp ENSDARG00000074121 2711 1.436 - 0.708 - - - - 0.728 - - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
39. MUM1L1 MUM1L1 968 1.432 - - 0.705 - - - - 0.727 -
40. si:ch211-267e7.2 si:ch211-267e7.2 102 1.431 0.707 0.724 - - - - - - -
41. ndfip2 ENSDARG00000033928 3129 1.427 - 0.716 - - - - 0.711 - - Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
42. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 0.987 - - - - - - - - 0.987 FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
43. ikbkb ENSDARG00000079123 498 0.983 - - - - - - - - 0.983 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
44. UBL4A UBL4A 1115 0.968 - - - - - - - - 0.968
45. klhdc10 ENSDARG00000007764 529 0.966 - - - - - - - - 0.966 kelch domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-776]
46. flrt2 ENSDARG00000079355, ENSDARG00000097299, ENSDARG00000116552 1464 0.964 - - - - - - - - 0.964 fibronectin leucine rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-267]
47. zgc:173480 171 0.963 - - - - - - - - 0.963 zgc:173480
48. nupl2 ENSDARG00000029043 105 0.963 - - - - - - - - 0.963 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
49. abcg1 ENSDARG00000063475 97 0.963 - - - - - - - - 0.963 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
50. flrt1a 107 0.963 - - - - - - - - 0.963 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
51. EPS8L1 891 0.962 - - - - - - - - 0.962 eps8-like1, transcript variant X3
52. si:dkey-156k2.6 si:dkey-156k2.6 848 0.961 - - - - - - - - 0.961
53. polr1d ENSDARG00000037570 860 0.961 - - - - - - - - 0.961 RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
54. ZFAT ENSDARG00000077987 205 0.961 - - - - - - - - 0.961 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
55. CABZ01054405.1 CABZ01054405.1 115 0.961 - - - - - - - - 0.961
56. ZNFX1 ENSDARG00000100280 118 0.961 - - - - - - - - 0.961 zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
57. ttc21b ENSDARG00000012368 229 0.961 - - - - - - - - 0.961 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
58. rab11fip3 ENSDARG00000016490 661 0.96 - - - - - - - - 0.960 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
59. oraov1 497 0.96 - - - - - - - - 0.960 oral cancer overexpressed 1
60. sox5 ENSDARG00000011582 3632 0.96 - - - - - - - - 0.960 SRY (sex determining region Y)-box 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]
61. ptn ENSDARG00000102340 229 0.959 - - - - - - - - 0.959 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
62. PRDM12 PRDM12 133 0.959 - - - - - - - - 0.959
63. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 0.959 - - - - - - - - 0.959 wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
64. SNAP91 ENSDARG00000098809 556 0.959 - - - - - - - - 0.959 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
65. slc25a43 ENSDARG00000102048 489 0.959 - - - - - - - - 0.959 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
66. rxrgb ENSDARG00000004697 332 0.959 - - - - - - - - 0.959 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
67. CTIF ENSDARG00000090617 270 0.959 - - - - - - - - 0.959 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
68. ltc4s ENSDARG00000062598 138 0.959 - - - - - - - - 0.959 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
69. RABEPK ENSDARG00000112165 112 0.958 - - - - - - - - 0.958 Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
70. KLF8 ENSDARG00000060661 219 0.958 - - - - - - - - 0.958 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
71. slc6a6a ENSDARG00000012534 183 0.958 - - - - - - - - 0.958 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
72. dkk3b ENSDARG00000070683 209 0.958 - - - - - - - - 0.958 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
73. cenpk ENSDARG00000039616 744 0.957 - - - - - - - - 0.957 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
74. AKAP12 AKAP12 140 0.957 - - - - - - - - 0.957
75. nrxn3b ENSDARG00000062693 192 0.957 - - - - - - - - 0.957 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
76. ror1 ENSDARG00000015176 378 0.957 - - - - - - - - 0.957 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
77. si:ch211-133l11.10 ENSDARG00000005626 381 0.957 - - - - - - - - 0.957 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
78. p4hb ENSDARG00000105116, ENSDARG00000116847 6885 0.956 - - - - - - - - 0.956 prolyl 4-hydroxylase, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-080610-1]
79. ube3d ENSDARG00000026178 244 0.956 - - - - - - - - 0.956 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
80. RFFL_1 RFFL_1 157 0.956 - - - - - - - - 0.956
81. nol8 ENSDARG00000044143 425 0.956 - - - - - - - - 0.956 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
82. gpr143 ENSDARG00000034572 559 0.956 - - - - - - - - 0.956 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
83. ncam2 ENSDARG00000017466 175 0.956 - - - - - - - - 0.956 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
84. prmt6 ENSDARG00000069706 484 0.956 - - - - - - - - 0.956 protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
85. rnf121 ENSDARG00000060282 1809 0.955 - - - - - - - - 0.955 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
86. ptprk ENSDARG00000063416 742 0.954 - - - - - - - - 0.954 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
87. rcbtb1 ENSDARG00000036645 255 0.954 - - - - - - - - 0.954 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
88. pif1 ENSDARG00000020289 216 0.954 - - - - - - - - 0.954 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
89. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.953 - - - - - - - - 0.953 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
90. CR376785.2 CR376785.2 175 0.953 - - - - - - - - 0.953
91. qser1 ENSDARG00000074750 597 0.953 - - - - - - - - 0.953 glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
92. vcp ENSDARG00000020008, ENSDARG00000116074 2284 0.953 - - - - - - - - 0.953 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
93. CEP152 ENSDARG00000075725 391 0.952 - - - - - - - - 0.952 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
94. pigl ENSDARG00000067752, ENSDARG00000116105 282 0.952 - - - - - - - - 0.952 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
95. umps ENSDARG00000012215 4564 0.952 - - - - - - - - 0.952 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
96. dvl1b ENSDARG00000055552 146 0.952 - - - - - - - - 0.952 dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
97. hprt1l ENSDARG00000014866 696 0.952 - - - - - - - - 0.952 hypoxanthine phosphoribosyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040625-17]
98. AL929322.1 AL929322.1 300 0.952 - - - - - - - - 0.952
99. pus7 ENSDARG00000031774 195 0.951 - - - - - - - - 0.951 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
100. etv1 ENSDARG00000101959 358 0.951 - - - - - - - - 0.951 ets variant 1 [Source:ZFIN;Acc:ZDB-GENE-070104-1]

There are 1334 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA