Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for foxn4

Gene Name Gene ID Reads Annotation
foxn4 ENSDARG00000010591 2332 forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]










Genes with expression patterns similar to foxn4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxn4 ENSDARG00000010591 2332 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
2. fabp7a ENSDARG00000007697 5211 3.338 - - 0.749 0.901 - - 0.769 - 0.919 fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
3. neurod neurod 1189 3.193 - - 0.770 - - 0.729 0.867 - 0.827
4. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.626 - - - - - - 0.873 0.850 0.903 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
5. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.523 - - - - - - 0.880 0.856 0.787 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
6. ctnnbip1 ENSDARG00000038954 2519 2.469 - - - - 0.890 - - 0.830 0.749 catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
7. insm1a ENSDARG00000091756 1838 2.46 - - 0.748 - - - 0.891 - 0.821 insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
8. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 2.453 - - - - 0.905 - 0.764 - 0.784 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
9. rrm1 ENSDARG00000014017 7296 2.406 - - - 0.723 - - - 0.852 0.831 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
10. fzd3a ENSDARG00000021664 1958 2.406 - - - - - - 0.851 0.821 0.734 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
11. epb41a ENSDARG00000099283 860 2.4 - - 0.761 - - - 0.914 0.725 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
12. slc29a1a ENSDARG00000101289 2074 2.387 - - 0.704 0.873 - - - - 0.810 solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
13. hmgb3a ENSDARG00000056725 15668 2.382 - - - - - - 0.784 0.828 0.770 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
14. HNRNPAB HNRNPAB 22267 2.376 - - - - 0.834 - - 0.712 0.830
15. CABZ01028287.1 CABZ01028287.1 626 2.357 - - - - - 0.742 0.915 - 0.700
16. ebf3 ebf3 4238 2.343 - - - - - - 0.730 0.779 0.834
17. bcl11ab ENSDARG00000063153 3032 2.34 - - - 0.860 - - - 0.743 0.737 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
18. tubb5 ENSDARG00000037997 18691 2.34 - - - 0.711 - - 0.781 0.848 - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
19. klc2 3058 2.339 - - - - 0.886 0.729 - 0.724 - kinesin light chain 2
20. wu:fq41a10 wu:fq41a10 7009 2.317 - - - 0.739 - - 0.782 0.796 -
21. btg2 ENSDARG00000020298 6616 2.295 - - - - 0.811 - 0.756 0.728 - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
22. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.289 - - - 0.721 - - 0.845 - 0.723 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
23. si:ch211-10a23.2 ENSDARG00000060656 471 2.286 - - - - - 0.741 0.818 - 0.727 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
24. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.273 - - - - - - 0.736 0.733 0.804 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
25. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.268 - - - - - 0.708 0.800 - 0.760 immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
26. zfhx4 ENSDARG00000075542 6927 2.233 - - 0.701 - 0.758 - - 0.774 - zinc finger homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-070530-3]
27. pou3f2a ENSDARG00000070220 817 2.224 - - - 0.717 - - 0.792 - 0.715 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
28. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.223 - - - 0.737 - - 0.709 - 0.777 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
29. mdkb ENSDARG00000020708 5393 2.215 - - - - 0.813 - 0.701 - 0.701 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
30. mir124-2 196 2.211 - - - 0.745 - - 0.761 - 0.705 microRNA 124-2
31. smarcd1 ENSDARG00000019004 6028 2.21 - - - 0.716 - - 0.739 - 0.755 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
32. slc17a6b ENSDARG00000041150 823 2.182 - - 0.703 - - - 0.712 0.767 - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
33. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.159 - - - - 0.744 - 0.708 - 0.707 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
34. nfu1 ENSDARG00000068125 1743 1.849 - 0.954 - - 0.895 - - - - NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
35. ABTB2 ABTB2 584 1.836 - 0.934 - - 0.902 - - - -
36. commd3 ENSDARG00000045402 1601 1.815 - 0.912 - - 0.903 - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
37. wu:fc51f04 wu:fc51f04 7074 1.808 - - - 0.900 - - - - 0.908
38. tmem194a tmem194a 745 1.798 - 0.941 - - - 0.857 - - -
39. ppme1 ENSDARG00000009771 1697 1.797 - 0.901 - - 0.896 - - - - protein phosphatase methylesterase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7064]
40. gnb5b ENSDARG00000055377 98 1.784 - - - - - 0.869 0.915 - - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
41. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 1.776 - 0.875 - - 0.901 - - - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
42. MAP3K2 ENSDARG00000062884 34 1.763 - 0.989 - - - - 0.774 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
43. mab21l1 ENSDARG00000102047 4665 1.757 - - 0.847 0.910 - - - - - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
44. fabp11b ENSDARG00000002311 354 1.74 - - - - - - - 0.868 0.872 fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
45. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 1.734 - - - 0.838 0.896 - - - - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
46. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.721 - - - - 0.898 - 0.823 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
47. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.714 - - - - - - 0.867 - 0.847 neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
48. slc6a1b ENSDARG00000039647 1301 1.714 - - - - - - 0.910 0.804 - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
49. prdm1b ENSDARG00000098925 440 1.712 - - - - - - - 0.854 0.858 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
50. ADAM22 ENSDARG00000060532 2259 1.706 - - - - - - 0.903 - 0.803 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
51. BX511121.1 ENSDARG00000029997 1774 1.704 - - - - - 0.768 0.936 - -
52. her4.1 ENSDARG00000056732 1264 1.702 - - - - - - 0.891 - 0.811 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
53. nova2 ENSDARG00000017673 7685 1.701 - - - - - - 0.874 - 0.827 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
54. irx5a ENSDARG00000034043 1694 1.698 - - - 0.809 0.889 - - - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
55. sox2 ENSDARG00000070913 2763 1.698 - - - 0.762 - - 0.936 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
56. pou4f1 ENSDARG00000005559 821 1.694 - - - - 0.902 - 0.792 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
57. rnf44 ENSDARG00000068582 1612 1.694 - - 0.820 - 0.874 - - - - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
58. stmn1b ENSDARG00000033655 9491 1.691 - - - - - - 0.833 - 0.858 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
59. cadm3 ENSDARG00000057013 1545 1.69 - - - - - - - 0.853 0.837 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
60. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.687 - - - - - 0.759 0.928 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
61. si:ch211-26b3.4 ENSDARG00000075491 50 1.687 - - - - - 0.795 0.892 - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
62. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.685 - - - - - 0.733 0.952 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
63. cspg5a ENSDARG00000069981 1699 1.683 - - - - - - 0.844 - 0.839 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
64. zgc:100906 ENSDARG00000033599 344 1.683 - - - - - 0.703 0.980 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
65. crb1 ENSDARG00000100506, ENSDARG00000110621 373 1.676 - - - 0.758 - - 0.918 - - crumbs family member 1, photoreceptor morphogenesis associated [Source:ZFIN;Acc:ZDB-GENE-050208-382]
66. unc119b ENSDARG00000044362 1528 1.676 - - - - - - 0.939 - 0.737 unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
67. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 1.675 - 0.785 - - 0.890 - - - - activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
68. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1.675 - - 0.780 - - - 0.895 - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
69. FP016176.1 FP016176.1 7030 1.673 - - - - - 0.848 0.825 - -
70. nptnb ENSDARG00000043864 165 1.672 - - - - - 0.714 0.958 - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
71. marcksl1b ENSDARG00000035715 37390 1.671 - - - - - - - 0.895 0.776 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
72. gnao1a ENSDARG00000016676 8184 1.67 - - - - - - 0.806 - 0.864 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
73. nr2e1 ENSDARG00000017107 340 1.667 - - 0.765 0.902 - - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
74. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.664 - - - - - - 0.904 - 0.760 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
75. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.66 - - - - - - 0.875 0.785 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
76. chrm3a ENSDARG00000071091 72 1.66 - - - - - 0.778 0.882 - - cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]
77. nadl1.1 1200 1.659 - - - - - - 0.859 0.800 - neural adhesion molecule L1.1, transcript variant X1
78. mnx2b ENSDARG00000030350 484 1.657 - - - - - 0.741 0.916 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
79. atoh7 ENSDARG00000069552 254 1.654 - - - - - - 0.774 - 0.880 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
80. sulf2l sulf2l 4980 1.653 - - 0.787 - - - 0.866 - -
81. CABZ01029738.1 CABZ01029738.1 327 1.651 - - - - - 0.795 0.856 - -
82. bri3bp ENSDARG00000010108 6295 1.65 - - - - - - - 0.864 0.786 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
83. tuba1c ENSDARG00000055216 8384 1.65 - - - - - - 0.771 - 0.879 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
84. prdm8 ENSDARG00000025017 370 1.643 - - - - - 0.707 0.936 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
85. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.642 - - - - - - 0.784 - 0.858 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
86. tmem35 ENSDARG00000052567 5685 1.642 - - - - - - 0.864 - 0.778 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
87. myt1b ENSDARG00000102879 5411 1.64 - - - - - - 0.789 - 0.851 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
88. st8sia2 ENSDARG00000018788 2183 1.64 - - - 0.718 - - 0.922 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
89. faxcb ENSDARG00000078981 249 1.64 - - - - - 0.751 0.889 - - failed axon connections homolog b [Source:ZFIN;Acc:ZDB-GENE-100922-19]
90. TUBA1A ENSDARG00000001889 25294 1.637 - - - - - - 0.864 0.773 - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
91. zic5 ENSDARG00000016022 1034 1.634 - - - 0.811 - - 0.823 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
92. gbp ENSDARG00000040059 1939 1.634 - - - - 0.888 - 0.746 - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
93. nubp2 ENSDARG00000055653 803 1.633 0.723 0.910 - - - - - - - nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
94. lingo2 lingo2 67 1.629 - - - - - 0.814 0.815 - -
95. otx2 766 1.629 - - - 0.799 - - - - 0.830 orthodenticle homeobox 2, transcript variant X2
96. nrn1a ENSDARG00000071860 1311 1.626 - - - - - - 0.918 - 0.708 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
97. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.625 - - - - 0.874 - - 0.751 - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
98. snrnp70 ENSDARG00000077126 5921 1.623 - - - - 0.890 - - - 0.733 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
99. plp1a ENSDARG00000103732 3544 1.623 - - - - - - 0.885 - 0.738 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
100. her4.3 ENSDARG00000070770 613 1.622 - - - - - - 0.913 - 0.709 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]

There are 1932 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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