Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for foxi3a

Gene Name Gene ID Reads Annotation
foxi3a ENSDARG00000055926 749 forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]










Genes with expression patterns similar to foxi3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxi3a ENSDARG00000055926 749 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]
2. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 2.619 0.902 - - - - 0.866 0.851 - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
3. slc47a1 ENSDARG00000046012 1426 2.512 - - - - 0.966 0.801 0.745 - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
4. ca15a ENSDARG00000015654 2657 2.441 - - - 0.733 - 0.785 0.923 - - carbonic anhydrase XVa [Source:ZFIN;Acc:ZDB-GENE-070424-7]
5. alx4a ENSDARG00000088332 895 2.359 0.709 - - - - 0.781 0.869 - - ALX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-070712-3]
6. creb3l3 creb3l3 1981 2.204 - - - - - 0.749 0.752 0.703 -
7. reep3l reep3l 608 1.808 - 0.810 - - 0.998 - - - -
8. ugt1b4 ENSDARG00000097024 1848 1.791 - 0.802 - - 0.989 - - - - UDP glucuronosyltransferase 1 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-080227-13]
9. dpp4 ENSDARG00000079420 1286 1.766 - - - - - 0.891 0.875 - - dipeptidyl-peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-081104-277]
10. si:dkey-12j5.1 ENSDARG00000089480 3198 1.743 - - - - 0.975 0.768 - - - si:dkey-12j5.1 [Source:ZFIN;Acc:ZDB-GENE-100922-71]
11. tcn2l tcn2l 2428 1.735 - - - - 0.969 - 0.766 - -
12. bckdk ENSDARG00000016904 3775 1.726 - - - - 0.985 - 0.741 - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
13. rnf11a ENSDARG00000010442 592 1.698 - - - - 0.998 - 0.700 - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
14. ctps1a ENSDARG00000030700 3868 1.682 - - - - - 0.872 0.810 - - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
15. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.666 - 0.832 - - 0.834 - - - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
16. pck1 ENSDARG00000013522 1657 1.639 - - - - - 0.795 0.844 - - phosphoenolpyruvate carboxykinase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-030909-11]
17. mmp30 ENSDARG00000045887 1652 1.628 - - - - - 0.824 0.804 - - matrix metallopeptidase 30 [Source:ZFIN;Acc:ZDB-GENE-060421-5765]
18. jag1b ENSDARG00000013168 1002 1.622 - - - - - 0.816 0.806 - - jagged 1b [Source:ZFIN;Acc:ZDB-GENE-011128-4]
19. nt5dc2 ENSDARG00000059646 3878 1.611 - - - - - 0.834 0.777 - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
20. TMEM106C ENSDARG00000098105 793 1.602 0.860 - - - - - 0.742 - - transmembrane protein 106C [Source:ZFIN;Acc:ZDB-GENE-061013-562]
21. BX004812.1 ENSDARG00000096968 5467 1.594 - - - - - 0.831 0.763 - -
22. acot11b ENSDARG00000042122 235 1.586 - - - - - 0.859 0.727 - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
23. BX005001.1 BX005001.1 741 1.585 - - - - - 0.810 0.775 - -
24. cdc45 ENSDARG00000043720 353 1.58 - 0.834 - - - 0.746 - - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
25. slc6a13l 121 1.578 - 0.824 - - - 0.754 - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
26. cdh6 ENSDARG00000014522 5492 1.577 - - - - - 0.776 0.801 - - cadherin 6 [Source:ZFIN;Acc:ZDB-GENE-050320-92]
27. col12a1a ENSDARG00000078322 1833 1.576 - 0.844 - - - 0.732 - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
28. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 1.572 - - - - - 0.833 0.739 - - wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
29. rasa4 ENSDARG00000029372 295 1.567 - 0.777 - - - - 0.790 - - RAS p21 protein activator 4 [Source:ZFIN;Acc:ZDB-GENE-060526-349]
30. si:dkey-30c15.13 ENSDARG00000069524, ENSDARG00000114258 403 1.565 - - - - - 0.749 0.816 - - si:dkey-30c15.13 [Source:ZFIN;Acc:ZDB-GENE-060503-73]
31. hoxc12a ENSDARG00000070352 7409 1.563 - - - - - 0.842 0.721 - - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
32. dock8 ENSDARG00000055225 312 1.562 - 0.807 - - - 0.755 - - - dedicator of cytokinesis 8 [Source:ZFIN;Acc:ZDB-GENE-060503-743]
33. mthfd1b ENSDARG00000040492 3784 1.561 0.796 - - - - 0.765 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
34. slc39a5 ENSDARG00000079525 2157 1.56 - - - - - 0.791 0.769 - - solute carrier family 39 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060608-1]
35. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 1.557 - - - - - 0.770 0.787 - - spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
36. itga5 ENSDARG00000006353 1876 1.552 - 0.799 - - - 0.753 - - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
37. soat2 ENSDARG00000059824 62 1.549 - - - - - 0.716 0.833 - - sterol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-061013-742]
38. TM6SF2 ENSDARG00000029057 1239 1.546 0.750 - - - - - 0.796 - - transmembrane 6 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-338]
39. gpr137 ENSDARG00000037244 801 1.537 - - - - - 0.768 0.769 - - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
40. tm4sf4 ENSDARG00000040747 65 1.531 - 0.795 - - - - 0.736 - - transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
41. clcn7 ENSDARG00000019556 1410 1.53 - 0.759 - - - - 0.771 - - chloride channel 7 [Source:ZFIN;Acc:ZDB-GENE-061103-196]
42. CD68 CD68 4599 1.528 - - - - - 0.779 0.749 - -
43. F8A3 F8A3 646 1.527 - 0.766 - - - 0.761 - - -
44. FAT2 ENSDARG00000018923 1088 1.519 0.713 0.806 - - - - - - - FAT atypical cadherin 2 [Source:ZFIN;Acc:ZDB-GENE-111031-1]
45. pcdh1b ENSDARG00000036175 101 1.518 - 0.777 - - - 0.741 - - - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
46. mdm2 ENSDARG00000033443, ENSDARG00000115677 2480 1.514 0.781 - - - - 0.733 - - - MDM2 oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-990415-153]
47. slc43a2a ENSDARG00000036848 6798 1.514 - - - - - 0.798 0.716 - - solute carrier family 43 (amino acid system L transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-964]
48. EGFR_2 EGFR_2 71 1.514 - - - - - 0.809 0.705 - -
49. SLC27A2_1 SLC27A2_1 974 1.511 0.733 - - - - - 0.778 - -
50. hoga1 ENSDARG00000018944 800 1.505 - 0.785 - - - - 0.720 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
51. zgc:193711 ENSDARG00000101901 503 1.501 - 0.744 - - - 0.757 - - - zgc:193711 [Source:ZFIN;Acc:ZDB-GENE-081022-34]
52. cers5 ENSDARG00000002365 2540 1.492 - - - - - 0.739 0.753 - - ceramide synthase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1740]
53. cpvl ENSDARG00000056480 2115 1.483 - - - - - 0.743 0.740 - - carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
54. cyb5b ENSDARG00000099774 1224 1.481 - 0.723 - - - - 0.758 - - cytochrome b5 type B [Source:ZFIN;Acc:ZDB-GENE-040426-2614]
55. cers2b ENSDARG00000058992 5319 1.48 - - - - - 0.720 0.760 - - ceramide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-110408-40]
56. RBM47 ENSDARG00000061985 2498 1.478 - - - - - 0.730 0.748 - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
57. emx1 ENSDARG00000039569 787 1.476 - - - - - 0.705 0.771 - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
58. cetp ENSDARG00000030872 611 1.473 - - - - - 0.711 0.762 - - cholesteryl ester transfer protein, plasma [Source:ZFIN;Acc:ZDB-GENE-041114-54]
59. slc22a6l ENSDARG00000055523 370 1.467 - - - - - 0.709 0.758 - - solute carrier family 22 (organic anion transporter), member 6, like [Source:ZFIN;Acc:ZDB-GENE-040426-2249]
60. ERMP1_1 ERMP1_1 616 1.461 - 0.714 - - - 0.747 - - -
61. C2H1orf35 C2H1orf35 652 1.457 - 0.722 - - - - 0.735 - -
62. slc30a8 ENSDARG00000100917 761 1.451 - - - - - 0.705 0.746 - - solute carrier family 30 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060315-10]
63. si:dkey-52k20.13 si:dkey-52k20.13 428 1.447 - 0.741 - - - 0.706 - - -
64. zgc:194887 ENSDARG00000098586 437 1.445 - - - - - 0.733 0.712 - - zgc:194887 [Source:ZFIN;Acc:ZDB-GENE-081022-162]
65. si:ch73-299h12.6 ENSDARG00000101319 373 1.435 - 0.722 - - - 0.713 - - - si:ch73-299h12.6 [Source:ZFIN;Acc:ZDB-GENE-081031-44]
66. trim25l ENSDARG00000020863 292 1.422 - 0.709 - - - 0.713 - - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
67. etv5b ENSDARG00000044511, ENSDARG00000113744 1967 1.416 - - - - - 0.709 0.707 - - ets variant 5b [Source:ZFIN;Acc:ZDB-GENE-991228-4]
68. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.999 - - - - 0.999 - - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
69. commd3 ENSDARG00000045402 1601 0.999 - - - - 0.999 - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
70. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 0.999 - - - - 0.999 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
71. zgc:162816 ENSDARG00000070416 974 0.999 - - - - 0.999 - - - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
72. pou4f1 ENSDARG00000005559 821 0.998 - - - - 0.998 - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
73. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.998 - - - - 0.998 - - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
74. KDM5A ENSDARG00000104567 450 0.998 - - - - 0.998 - - - - lysine (K)-specific demethylase 5A [Source:ZFIN;Acc:ZDB-GENE-150114-1]
75. ccdc19 ccdc19 495 0.998 - - - - 0.998 - - - -
76. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 0.998 - - - - 0.998 - - - -
77. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 0.998 - - - - 0.998 - - - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
78. ypel3 ENSDARG00000055510 1344 0.998 - - - - 0.998 - - - - yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
79. smarcal1 ENSDARG00000102265 1921 0.998 - - - - 0.998 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
80. st3gal4 ENSDARG00000041006 636 0.998 - - - - 0.998 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
81. shisa3 ENSDARG00000075467 485 0.998 - - - - 0.998 - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
82. CR954963.1 ENSDARG00000097153 1135 0.997 - - - - 0.997 - - - -
83. zgc:162967 zgc:162967 2132 0.997 - - - - 0.997 - - - -
84. marveld1 ENSDARG00000011724 1025 0.997 - - - - 0.997 - - - - MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
85. rhbdd2 ENSDARG00000092463 937 0.997 - - - - 0.997 - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
86. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 0.997 - - - - 0.997 - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
87. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 0.997 - - - - 0.997 - - - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
88. mutyh 512 0.997 - - - - 0.997 - - - - mutY DNA glycosylase
89. gli2b ENSDARG00000020884 1468 0.997 - - - - 0.997 - - - - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
90. kctd9 kctd9 973 0.997 - - - - 0.997 - - - -
91. zgc:113333 ENSDARG00000038242 797 0.997 - - - - 0.997 - - - - zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
92. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 0.997 - - - - 0.997 - - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
93. dnajb12a ENSDARG00000039363 1072 0.997 - - - - 0.997 - - - - DnaJ (Hsp40) homolog, subfamily B, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2725]
94. NDST1 NDST1 1584 0.997 - - - - 0.997 - - - -
95. stc2a ENSDARG00000056680, ENSDARG00000109468 1156 0.997 - - - - 0.997 - - - - stanniocalcin 2a [Source:ZFIN;Acc:ZDB-GENE-041008-14]
96. ABTB2 ABTB2 584 0.997 - - - - 0.997 - - - -
97. AMPD2 AMPD2 1723 0.997 - - - - 0.997 - - - -
98. tmem223 ENSDARG00000069494 1528 0.997 - - - - 0.997 - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
99. zfyve21 ENSDARG00000027887 1687 0.997 - - - - 0.997 - - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
100. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.997 - - - - 0.997 - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]

There are 1146 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA