Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for foxi1

Gene Name Gene ID Reads Annotation
foxi1 ENSDARG00000104566 176 forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]










Genes with expression patterns similar to foxi1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxi1 ENSDARG00000104566 176 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
2. COL9A1 COL9A1 264 2.35 - - - 0.826 0.709 - - - 0.815
3. ripply2 ENSDARG00000070535 18 2 - - - - - 1.000 1.000 - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
4. vtg3 ENSDARG00000016448 8 2 - 1.000 - - - 1.000 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
5. CABZ01060813.1 CABZ01060813.1 12 1.993 0.993 - - - - 1.000 - - -
6. tbl2 ENSDARG00000043357 125 1.986 0.986 - - - - 1.000 - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
7. tprn ENSDARG00000101102 97 1.943 - 1.000 - - - 0.943 - - - taperin [Source:ZFIN;Acc:ZDB-GENE-081104-254]
8. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1.92 - 0.920 - - - 1.000 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
9. dgkza ENSDARG00000014439 82 1.906 0.906 - - - - - 1.000 - - diacylglycerol kinase, zeta a [Source:ZFIN;Acc:ZDB-GENE-111104-3]
10. papss2a ENSDARG00000071021, ENSDARG00000110734, ENSDARG00000112597 49 1.89 0.947 - - - - 0.943 - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2a [Source:ZFIN;Acc:ZDB-GENE-061110-85]
11. rwdd3 ENSDARG00000057315 289 1.834 0.940 0.894 - - - - - - - RWD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1723]
12. trim36 ENSDARG00000062794 785 1.827 0.849 0.978 - - - - - - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
13. si:ch211-198e13.3 5 1.805 - 0.878 - - - 0.927 - - - si:ch211-198e13.3, transcript variant X1
14. METTL15 ENSDARG00000089236 39 1.801 0.965 - - - - - 0.836 - - methyltransferase like 15 [Source:ZFIN;Acc:ZDB-GENE-130530-958]
15. fbxo15 ENSDARG00000016897 18 1.789 - 0.936 - - - 0.853 - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
16. CCDC30 ENSDARG00000056961 178 1.784 0.948 0.836 - - - - - - - coiled-coil domain containing 30 [Source:ZFIN;Acc:ZDB-GENE-130530-667]
17. rab11fip1a ENSDARG00000046124 69 1.77 - 0.874 - - - 0.896 - - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
18. DLEU7 DLEU7 91 1.759 0.978 0.781 - - - - - - -
19. SLC27A3 SLC27A3 240 1.745 0.875 - - - - - 0.870 - -
20. si:ch211-67e16.11 ENSDARG00000095580 635 1.74 0.926 - - - - - - - 0.814 si:ch211-67e16.11 [Source:ZFIN;Acc:ZDB-GENE-030131-7044]
21. bmb ENSDARG00000096603 120 1.737 - 0.984 - - - 0.753 - - - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
22. psmd2 ENSDARG00000103190 141 1.725 - - - - - - 1.000 0.725 - proteasome 26S subunit, non-ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1480]
23. mettl7a ENSDARG00000056726, ENSDARG00000060889, ENSDARG00000111162 18 1.71 0.957 - - - 0.753 - - - - methyltransferase like 7A [Source:ZFIN;Acc:ZDB-GENE-061027-239]
24. sema3fa ENSDARG00000011163 759 1.709 0.854 0.855 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
25. irf1b ENSDARG00000043249 30 1.703 - - 0.703 - - 1.000 - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
26. zc3h10 ENSDARG00000030335 236 1.697 - - - - - 0.860 - 0.837 - zinc finger CCCH-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2359]
27. si:dkey-234h16.7 ENSDARG00000095754 115 1.696 - 0.995 - 0.701 - - - - - si:dkey-234h16.7 [Source:ZFIN;Acc:ZDB-GENE-060601-3]
28. myh14 ENSDARG00000073732 502 1.691 0.949 - - - - - - 0.742 - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
29. ssbp3a ENSDARG00000058237 87 1.69 0.741 0.949 - - - - - - - single stranded DNA binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-070705-484]
30. tbx1 ENSDARG00000031891 397 1.689 - - - 0.913 0.776 - - - - T-box 1 [Source:ZFIN;Acc:ZDB-GENE-030805-5]
31. BX004873.3 BX004873.3 59 1.682 - 0.975 0.707 - - - - - -
32. ccdc106 ccdc106 101 1.678 0.800 0.878 - - - - - - -
33. CPNE8_1 CPNE8_1 140 1.668 0.914 - - - - - - 0.754 -
34. cdh10 cdh10 38 1.665 - - - 0.722 - 0.943 - - -
35. CR854827.2 ENSDARG00000097227 15 1.663 - - - - 0.796 0.867 - - -
36. si:dkey-247i3.3 si:dkey-247i3.3 297 1.651 - 0.741 - - - 0.910 - - -
37. gng12a ENSDARG00000003375 1250 1.648 0.888 - - - - - - 0.760 - guanine nucleotide binding protein (G protein), gamma 12a [Source:ZFIN;Acc:ZDB-GENE-040426-2555]
38. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1.638 - - - - 0.777 - - - 0.861 NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
39. tlx1 ENSDARG00000003965 67 1.609 - - - - 0.750 - - - 0.859 T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
40. tnni1b ENSDARG00000052708 478 1.609 - - - - 0.756 - - - 0.853 troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
41. PRC1 PRC1 583 1.598 0.847 - - - - - - 0.751 -
42. si:ch73-386o14.1 si:ch73-386o14.1 82 1.593 - 0.723 - - - 0.870 - - -
43. LSM5 ENSDARG00000071573 371 1.577 - 0.868 - - - - - 0.709 - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
44. wbp1la ENSDARG00000013245 143 1.569 - - - - - 0.837 - 0.732 - WW domain binding protein 1-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1961]
45. BACH1 BACH1 1021 1.569 0.707 0.862 - - - - - - -
46. si:dkey-48n15.2 si:dkey-48n15.2 297 1.567 0.719 0.848 - - - - - - -
47. fhl2a ENSDARG00000042018 244 1.565 - - - - 0.741 - - - 0.824 four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
48. tnnt2a ENSDARG00000020610 313 1.546 - - - - 0.720 - - - 0.826 troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
49. fgf20b ENSDARG00000086070 13 1.545 - - - - 0.712 - - - 0.833 fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
50. MMEL1 ENSDARG00000105389 213 1.536 - - - 0.765 - - - - 0.771 membrane metallo-endopeptidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-101112-2]
51. arsa ENSDARG00000042270 74 1.535 - - - - - 0.737 0.798 - - arylsulfatase A [Source:ZFIN;Acc:ZDB-GENE-050320-118]
52. phox2a ENSDARG00000007406 470 1.531 - - - - 0.736 - - - 0.795 paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
53. adoa ENSDARG00000042827 310 1.529 0.787 0.742 - - - - - - - 2-aminoethanethiol (cysteamine) dioxygenase a [Source:ZFIN;Acc:ZDB-GENE-041212-62]
54. si:dkey-238g7.2 si:dkey-238g7.2 181 1.524 - - - - - 0.733 - 0.791 -
55. CDH24 CDH24 325 1.519 - 0.796 0.723 - - - - - -
56. tssc1 tssc1 416 1.517 - 0.815 - - - 0.702 - - -
57. si:ch211-241n15.1 si:ch211-241n15.1 632 1.501 0.798 0.703 - - - - - - -
58. otomp ENSDARG00000040306 682 1.496 - - - 0.731 - - - - 0.765 otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
59. BX548021.2_1 BX548021.2_1 164 1.493 - - 0.721 - - - - - 0.772
60. si:ch1073-174d20.2 ENSDARG00000079651 171 1.483 - 0.706 - - - - - 0.777 - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
61. mab21l2 ENSDARG00000015266 1687 1.476 - - - - 0.745 - - - 0.731 mab-21-like 2 [Source:ZFIN;Acc:ZDB-GENE-011101-3]
62. BX897726.3 BX897726.3 220 1.475 - 0.708 - - - - - 0.767 -
63. shank3b ENSDARG00000063054 148 1.468 - 0.721 - - - - - 0.747 - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
64. adnpb ENSDARG00000074293 796 1.467 - - 0.707 - - - - 0.760 - activity-dependent neuroprotector homeobox b [Source:ZFIN;Acc:ZDB-GENE-030131-6385]
65. zgc:194930 ENSDARG00000079584 326 1.463 - 0.762 - - - 0.701 - - - zgc:194930 [Source:ZFIN;Acc:ZDB-GENE-081022-166]
66. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1.46 - - - 0.738 0.722 - - - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
67. foxf2a ENSDARG00000017195 345 1.446 - - - - 0.722 - - - 0.724 forkhead box F2a [Source:ZFIN;Acc:ZDB-GENE-110407-5]
68. bmp6 ENSDARG00000015686 211 1.436 - 0.727 0.709 - - - - - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
69. fnbp1l ENSDARG00000020131 79 1.429 - 0.718 0.711 - - - - - - formin binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040801-155]
70. BX323876.3 BX323876.3 19 1.42 - - - 0.706 - - - - 0.714
71. CT583626.2 CT583626.2 53 1 - 1.000 - - - - - - -
72. si:ch73-346m18.6 si:ch73-346m18.6 40 1 - 1.000 - - - - - - -
73. racgap1 ENSDARG00000015460 38 1 1.000 - - - - - - - - Rac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917]
74. thbs4a ENSDARG00000102777 625 1 - - - - - 1.000 - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
75. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 1 - - - - - 1.000 - - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
76. irak1 ENSDARG00000025949 19 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
77. TRIM35_3 TRIM35_3 172 1 - - - - - - 1.000 - -
78. ifit5 ifit5 12 1 - - - - - - 1.000 - -
79. BRD8 ENSDARG00000055999 34 1 - 1.000 - - - - - - - bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]
80. TRIM14_3 TRIM14_3 7 1 - - - - - - 1.000 - -
81. itga2.1 ENSDARG00000069390 6 1 - - - - - 1.000 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
82. ZC2HC1C ENSDARG00000070526 14 1 - - - - - 1.000 - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
83. TSPAN1 ENSDARG00000052027 4 1 - - - - - 1.000 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
84. CABZ01030033.1 ENSDARG00000117613 3 1 - - - - - - 1.000 - -
85. si:dkey-100h21.2 si:dkey-100h21.2 30 1 - 1.000 - - - - - - -
86. CABZ01055343.2_1 CABZ01055343.2_1 6 1 - 1.000 - - - - - - -
87. TNS3_1 TNS3_1 8 1 - - - - - - 1.000 - -
88. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - - 1.000 - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
89. GMEB2 ENSDARG00000093240 6 1 - - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
90. syt15 ENSDARG00000079926 8 1 - - - - - 1.000 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
91. si:ch211-120e1.7 ENSDARG00000094634 14 1 - - - - - - 1.000 - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
92. fmn1 ENSDARG00000011975 5 1 - - - - - - 1.000 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
93. osbp2 ENSDARG00000053487 42 1 - 1.000 - - - - - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
94. cldn11a ENSDARG00000020031 284 1 - 1.000 - - - - - - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
95. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - - - 1.000 - -
96. CR942805.1 CR942805.1 94 1 - - - - - - 1.000 - -
97. hyal3 ENSDARG00000036818 23 1 - - - - - - 1.000 - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
98. si:ch73-138e16.1 si:ch73-138e16.1 5 1 - 1.000 - - - - - - -
99. FHOD1 ENSDARG00000051768 43 1 - 1.000 - - - - - - - formin homology 2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110623-4]
100. sstr3 ENSDARG00000014477 14 1 1.000 - - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]

There are 1343 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA