Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for foxd5

Gene Name Gene ID Reads Annotation
foxd5 ENSDARG00000042485, ENSDARG00000109712 216 forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]










Genes with expression patterns similar to foxd5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
2. foxj1a ENSDARG00000101919 1095 2.452 - - 0.848 0.824 0.780 - - - - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
3. SPTBN4_1 ENSDARG00000092624 473 2.306 - 0.775 - - - 0.797 0.734 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
4. pcdh2ac ENSDARG00000099783 325 2.259 - 0.730 - - - 0.783 0.746 - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
5. pcdh8 ENSDARG00000006467 317 1.761 - - 0.968 0.793 - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
6. brf1a ENSDARG00000017835 206 1.74 - - 0.973 - - - 0.767 - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
7. cables1 ENSDARG00000099395 361 1.734 - - 0.948 0.786 - - - - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
8. CR942805.1 CR942805.1 94 1.712 - - 0.975 - - 0.737 - - -
9. zgc:194621 ENSDARG00000074696 85 1.682 - - - 0.742 - - - 0.940 - zgc:194621 [Source:ZFIN;Acc:ZDB-GENE-081022-130]
10. tbce ENSDARG00000099921 458 1.673 0.761 - - - - 0.912 - - - tubulin folding cofactor E [Source:ZFIN;Acc:ZDB-GENE-051030-120]
11. CU929394.1 CU929394.1 405 1.671 - - 0.966 0.705 - - - - -
12. PGBD4_6 PGBD4_6 107 1.655 - 0.739 - - - 0.916 - - -
13. ccdc113 ENSDARG00000006981 67 1.649 - 0.799 - 0.850 - - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
14. sox19b ENSDARG00000040266 532 1.642 - - - 0.817 - 0.825 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
15. lama5 ENSDARG00000058543 2782 1.638 - - 0.932 - 0.706 - - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
16. gdf6b ENSDARG00000005510 106 1.632 - - - 0.855 0.777 - - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
17. fam43b ENSDARG00000070222 92 1.614 - - - - - 0.800 0.814 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
18. myo16 ENSDARG00000078582 714 1.612 - 0.832 - - - 0.780 - - - myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
19. BX571853.2 ENSDARG00000110441 21 1.609 - - - - - 0.795 0.814 - -
20. apba1b ENSDARG00000074328 254 1.608 - - - - - 0.883 0.725 - - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
21. RAB33A ENSDARG00000057394, ENSDARG00000115279 380 1.605 0.862 0.743 - - - - - - - RAB33A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-283]
22. DNER ENSDARG00000061031 123 1.604 - - - - - 0.798 0.806 - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
23. cygb1 ENSDARG00000099371 63 1.603 - 0.761 - 0.842 - - - - - cytoglobin 1 [Source:ZFIN;Acc:ZDB-GENE-020513-1]
24. CASK CASK 1750 1.601 0.717 - 0.884 - - - - - -
25. xpr1 xpr1 840 1.573 - 0.854 - - - - 0.719 - -
26. PPP2R5B ENSDARG00000054931 213 1.566 - - - 0.792 - 0.774 - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
27. pax6b ENSDARG00000045936 349 1.552 0.742 - - - - 0.810 - - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
28. si:ch1073-219n12.1 71 1.55 - - - - - - 0.841 - 0.709 si:ch1073-219n12.1, transcript variant X1
29. hoxb10a ENSDARG00000011579 2135 1.546 0.726 - - - 0.820 - - - - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]
30. iqcc ENSDARG00000092483 65 1.543 - - - 0.792 - - 0.751 - - IQ motif containing C [Source:ZFIN;Acc:ZDB-GENE-090313-325]
31. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.541 - 0.752 0.789 - - - - - -
32. dbx1a ENSDARG00000086393 3161 1.538 0.706 - - - - 0.832 - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
33. sp5l ENSDARG00000115868 361 1.535 - - - 0.781 0.754 - - - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
34. TBC1D2 ENSDARG00000071304 16 1.534 - - - - - 0.802 - - 0.732 TBC1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-100]
35. CCDC84 ENSDARG00000059606 65 1.532 - - - - - 0.778 0.754 - - coiled-coil domain containing 84 [Source:ZFIN;Acc:ZDB-GENE-060929-1174]
36. ebf1b ENSDARG00000069196 64 1.53 - - - - - 0.817 - 0.713 - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
37. prok1 ENSDARG00000073948, ENSDARG00000114411 26 1.518 - - - - - 0.804 0.714 - - prokineticin 1 [Source:ZFIN;Acc:ZDB-GENE-070928-34]
38. si:ch211-247j9.1 ENSDARG00000079283 217 1.514 - 0.735 - - - 0.779 - - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
39. pcdh18a ENSDARG00000089805 1096 1.51 - - - - - 0.782 0.728 - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
40. srgap1 srgap1 2320 1.506 - - 0.764 - - 0.742 - - -
41. twist1a ENSDARG00000030402 3748 1.506 - - 0.805 0.701 - - - - - twist family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-000210-6]
42. rab36 ENSDARG00000014058 70 1.504 - - - - - 0.793 - 0.711 - RAB36, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040910-5]
43. lhx4 ENSDARG00000039458 328 1.499 - - - - - 0.783 - 0.716 - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
44. spon2b ENSDARG00000002732 115 1.483 - 0.701 - 0.782 - - - - - spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
45. CABZ01063077.1 CABZ01063077.1 22 1.483 - - - - - 0.773 0.710 - -
46. fgd 377 1.479 0.760 - - - - - 0.719 - - faciogenital dysplasia
47. dzank1 ENSDARG00000055787, ENSDARG00000111473 26 1.474 - - - - - 0.738 - - 0.736 double zinc ribbon and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-051113-296]
48. CHRNB4 ENSDARG00000101677 128 1.473 0.713 - - - - - 0.760 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
49. TNNC2 ENSDARG00000070835, ENSDARG00000111155 89 1.471 - 0.756 - - - - - 0.715 - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
50. gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 1.47 - - - 0.765 - 0.705 - - - glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]
51. rcor2 ENSDARG00000008278 1678 1.466 0.720 - - - - - 0.746 - - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
52. tlx3b ENSDARG00000017615, ENSDARG00000114069 84 1.46 - - - - - 0.759 0.701 - - T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]
53. sepn1 801 1.445 - - - 0.741 0.704 - - - - selenoprotein N, 1
54. grin1a ENSDARG00000027828 1327 1.43 0.729 - - - - 0.701 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
55. GRIN3A ENSDARG00000075802 27 1.421 - - - - - 0.714 - - 0.707 glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
56. CAMSAP3 ENSDARG00000059475 263 1.417 - 0.703 - - - 0.714 - - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
57. qrsl1 ENSDARG00000032704 200 1.414 0.712 0.702 - - - - - - - glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5540]
58. si:dkey-208k4.7 si:dkey-208k4.7 14 1 - - - - - - 1.000 - -
59. ponzr4 ENSDARG00000087440, ENSDARG00000114845 193 1 - - - - - - 1.000 - - plac8 onzin related protein 4 [Source:ZFIN;Acc:ZDB-GENE-050411-6]
60. inpp4b ENSDARG00000075201 267 0.983 - - 0.983 - - - - - - inositol polyphosphate-4-phosphatase type II B [Source:ZFIN;Acc:ZDB-GENE-090312-97]
61. Metazoa_SRP_8 Metazoa_SRP_8 153 0.983 - - 0.983 - - - - - -
62. ndst2b ENSDARG00000060678 453 0.981 - - 0.981 - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
63. CAPN1 ENSDARG00000055338 683 0.98 - - 0.980 - - - - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
64. arhgap29b ENSDARG00000017748 812 0.977 - - 0.977 - - - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
65. wdr66 ENSDARG00000059855 276 0.976 - - 0.976 - - - - - - WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
66. RNase_MRP RNase_MRP 118 0.975 - - 0.975 - - - - - -
67. msgn1 ENSDARG00000070546 188 0.975 - - 0.975 - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
68. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.975 - - 0.975 - - - - - - carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
69. zgc:158260 ENSDARG00000101703 103 0.975 - - 0.975 - - - - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
70. CMTM8 CMTM8 71 0.975 - - 0.975 - - - - - -
71. CABZ01113061.1 CABZ01113061.1 51 0.975 - - 0.975 - - - - - -
72. F8A3 F8A3 646 0.974 - - 0.974 - - - - - -
73. PLA2G3_1 PLA2G3_1 411 0.973 - - 0.973 - - - - - -
74. CU571255.1 CU571255.1 902 0.973 - - 0.973 - - - - - -
75. mxra5b ENSDARG00000076309 190 0.973 - - 0.973 - - - - - - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
76. slc35c1 ENSDARG00000104669 65 0.973 - - 0.973 - - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
77. BX649554.3_1 BX649554.3_1 1071 0.973 - - 0.973 - - - - - -
78. il2rb ENSDARG00000075720 116 0.973 - - 0.973 - - - - - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
79. antxr1c ENSDARG00000063612 3203 0.971 - - 0.971 - - - - - - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
80. TRAK1 212 0.971 - - 0.971 - - - - - - trafficking protein, kinesin binding 1, transcript variant X6
81. map3k10 ENSDARG00000055672 284 0.971 - - 0.971 - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
82. ATF6B 960 0.97 - - 0.970 - - - - - - activating transcription factor 6 beta
83. TATDN3 ENSDARG00000044072 914 0.97 - - 0.970 - - - - - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
84. gpr144 gpr144 479 0.97 - - 0.970 - - - - - -
85. GPSM3 GPSM3 257 0.97 - - 0.970 - - - - - -
86. inpp5e ENSDARG00000103926 567 0.969 - - 0.969 - - - - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
87. twist2 ENSDARG00000078266 499 0.969 - - 0.969 - - - - - - twist2 [Source:ZFIN;Acc:ZDB-GENE-980526-235]
88. TRIM14_6 TRIM14_6 342 0.969 - - 0.969 - - - - - -
89. CABZ01073032.1 CABZ01073032.1 125 0.968 - - 0.968 - - - - - -
90. IER2 IER2 604 0.968 - - 0.968 - - - - - -
91. si:ch73-173m3.3 si:ch73-173m3.3 425 0.968 - - 0.968 - - - - - -
92. CAMSAP2 CAMSAP2 109 0.968 - - 0.968 - - - - - -
93. rapgef1a ENSDARG00000043593 416 0.967 - - 0.967 - - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
94. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.966 - - 0.966 - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
95. zgc:66484 ENSDARG00000030478 167 0.966 - - 0.966 - - - - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
96. CYP27A1_1 CYP27A1_1 329 0.965 - - 0.965 - - - - - -
97. FBLN1 ENSDARG00000103311 877 0.965 - - 0.965 - - - - - - fibulin 1 [Source:NCBI gene;Acc:30240]
98. mns1 ENSDARG00000060169, ENSDARG00000110835 283 0.965 - - 0.965 - - - - - - meiosis-specific nuclear structural 1 [Source:ZFIN;Acc:ZDB-GENE-030521-42]
99. DACT3 DACT3 766 0.964 - - 0.964 - - - - - -
100. zgc:113377 335 0.964 - - 0.964 - - - - - - zgc:113377, transcript variant X2

There are 1428 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA