Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for foxc1b

Gene Name Gene ID Reads Annotation
foxc1b ENSDARG00000055398 1499 forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]










Genes with expression patterns similar to foxc1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxc1b ENSDARG00000055398 1499 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
2. DNAJA4 ENSDARG00000051762 5657 2.542 - 0.829 - - 0.968 - 0.745 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
3. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 2.407 - 0.754 - - - 0.911 0.742 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
4. myhc4 ENSDARG00000035438 1322 2.4 - 0.842 - - - 0.807 0.751 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
5. cacng1 cacng1 3118 2.39 - 0.877 - - - 0.745 0.768 - -
6. limch1a ENSDARG00000074275 2981 2.318 - 0.844 - - - 0.726 0.748 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
7. cacna2d1a ENSDARG00000014804 1924 2.312 0.702 0.789 - - - - 0.821 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
8. cyp26b1 ENSDARG00000077121 1364 2.284 0.722 - - - - - - 0.758 0.804 cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
9. bag3 ENSDARG00000039486 1087 2.282 - 0.761 - - - 0.805 0.716 - - BCL2 associated athanogene 3 [Source:ZFIN;Acc:ZDB-GENE-040801-40]
10. RHOBTB3 RHOBTB3 319 2.275 0.818 0.733 - - - - 0.724 - -
11. foxc1a ENSDARG00000091481 1059 2.263 - 0.801 - - - 0.704 - - 0.758 forkhead box C1a [Source:ZFIN;Acc:ZDB-GENE-010302-1]
12. CU467854.2 CU467854.2 298 2.259 0.761 - - - - 0.772 0.726 - -
13. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.822 - 0.836 - - 0.986 - - - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
14. camk2a ENSDARG00000053617 950 1.787 - - - - 0.985 - 0.802 - - calcium/calmodulin-dependent protein kinase II alpha [Source:ZFIN;Acc:ZDB-GENE-051113-72]
15. stc2a ENSDARG00000056680, ENSDARG00000109468 1156 1.746 - 0.754 - - 0.992 - - - - stanniocalcin 2a [Source:ZFIN;Acc:ZDB-GENE-041008-14]
16. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.731 - 0.925 - - - - 0.806 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
17. rp42-pen rp42-pen 3395 1.721 - 0.895 - - - - 0.826 - -
18. loxl1 ENSDARG00000054451 2485 1.709 - 0.728 - - 0.981 - - - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
19. dtnba ENSDARG00000077694 5483 1.706 - 0.848 - - - 0.858 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
20. akap6 ENSDARG00000077295 1382 1.695 - 0.876 - - - - 0.819 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
21. zdhhc5a ENSDARG00000016263 625 1.688 - 0.727 - - 0.961 - - - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
22. fgf1a ENSDARG00000017542, ENSDARG00000110811, ENSDARG00000114842 227 1.687 - 0.867 - - - 0.820 - - - fibroblast growth factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1729]
23. zcchc24 ENSDARG00000078026 1619 1.681 0.765 0.916 - - - - - - - zinc finger, CCHC domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-3573]
24. rnf41l ENSDARG00000073918 329 1.68 0.769 0.911 - - - - - - - ring finger protein 41, like [Source:ZFIN;Acc:ZDB-GENE-030131-9441]
25. vwde ENSDARG00000103443 5758 1.679 - 0.862 - - - 0.817 - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
26. pmp22a ENSDARG00000105223, ENSDARG00000115339 9849 1.666 - - - - 0.938 - - 0.728 - peripheral myelin protein 22a [Source:ZFIN;Acc:ZDB-GENE-030131-6757]
27. twist2 ENSDARG00000078266 499 1.663 - 0.742 - - - 0.921 - - - twist2 [Source:ZFIN;Acc:ZDB-GENE-980526-235]
28. ryr1b ENSDARG00000023797 5693 1.656 - 0.903 - - - - 0.753 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
29. pbxip1a ENSDARG00000071015 4960 1.655 - 0.903 - - - - 0.752 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
30. tgm1l1 ENSDARG00000102106 1437 1.648 - 0.894 - - - - 0.754 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
31. BX511021.1 ENSDARG00000073936 647 1.647 - 0.854 - - - 0.793 - - - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
32. znf648 ENSDARG00000104823 1918 1.646 - 0.921 - - - - 0.725 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
33. EEF1E1 ENSDARG00000071774 3806 1.645 - 0.828 - - - - 0.817 - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
34. srl ENSDARG00000104587 11126 1.645 - 0.902 - - - - 0.743 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
35. ITGB1BP2 ENSDARG00000030176 2472 1.639 - 0.896 - - - - 0.743 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
36. BX530018.3 ENSDARG00000107022 614 1.638 - 0.871 - - - - 0.767 - -
37. zgc:110655 zgc:110655 4237 1.633 0.832 0.801 - - - - - - -
38. usp28 ENSDARG00000008880 1850 1.631 - 0.875 - - - - 0.756 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
39. ryr3 ENSDARG00000071331 6795 1.624 - 0.876 - - - - 0.748 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
40. ncl ENSDARG00000002710 16951 1.623 - 0.826 - - 0.797 - - - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
41. jph1a ENSDARG00000058603 2852 1.62 - 0.892 - - - - 0.728 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
42. stac3 ENSDARG00000098883 1765 1.618 - 0.897 - - - 0.721 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
43. cdkal1 ENSDARG00000104848 2102 1.616 0.738 0.878 - - - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
44. txlnbb ENSDARG00000076241 6396 1.615 - 0.893 - - - - 0.722 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
45. cap2 ENSDARG00000104478 3266 1.615 - 0.792 - - - - 0.823 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
46. znf106a ENSDARG00000016651 6049 1.615 - 0.860 - - - - 0.755 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
47. six1b ENSDARG00000026473 1908 1.613 - 0.864 - - - - 0.749 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
48. sh3bgr ENSDARG00000021633 3498 1.612 - 0.898 - - - - 0.714 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
49. alpk2 ENSDARG00000079637 1483 1.612 - 0.847 - - - - 0.765 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
50. PTPLA PTPLA 4044 1.611 - 0.863 - - - - 0.748 - -
51. klhl40a ENSDARG00000039052 2537 1.609 - 0.891 - - - - 0.718 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
52. nmrk2 ENSDARG00000067848 10293 1.608 - 0.880 - - - - 0.728 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
53. lrrfip1a ENSDARG00000030012 1263 1.606 - 0.839 - - - 0.767 - - - leucine rich repeat (in FLII) interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-99]
54. MYOM3 2720 1.604 - 0.792 - - - - 0.812 - - myomesin 3, transcript variant X2
55. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.603 0.761 0.842 - - - - - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
56. COL9A1 COL9A1 264 1.603 - - - - - - - 0.768 0.835
57. pi15a ENSDARG00000045378 2361 1.601 - 0.833 - - - 0.768 - - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
58. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.6 - 0.872 - - - - 0.728 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
59. cfl2 ENSDARG00000014106 8051 1.597 - 0.893 - - - - 0.704 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
60. chrnd ENSDARG00000019342 2728 1.597 - 0.891 - - - - 0.706 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
61. slc43a1b ENSDARG00000037748 1406 1.595 - 0.874 - - - - 0.721 - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
62. sptb ENSDARG00000030490 7128 1.595 - 0.862 - - - - 0.733 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
63. tnw 16679 1.589 - 0.840 - - - - 0.749 - - tenascin W, transcript variant X2
64. sgca ENSDARG00000074156 2418 1.585 - 0.814 - - - 0.771 - - - sarcoglycan, alpha [Source:ZFIN;Acc:ZDB-GENE-041111-121]
65. MYOT ENSDARG00000076312 1791 1.584 - 0.850 - - - - 0.734 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
66. TMPO TMPO 3264 1.583 - 0.859 - - - - 0.724 - -
67. hhatla ENSDARG00000039051 6598 1.582 - 0.821 - - - - 0.761 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
68. myod1 ENSDARG00000030110 6019 1.581 - 0.817 - - - - 0.764 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
69. wdr90 ENSDARG00000079241 1163 1.578 0.825 - - - - - 0.753 - - WD repeat domain 90 [Source:ZFIN;Acc:ZDB-GENE-070424-67]
70. mef2cb ENSDARG00000009418 1124 1.578 0.750 0.828 - - - - - - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
71. pygma ENSDARG00000055518 15972 1.576 - 0.859 - - - - 0.717 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
72. rhd ENSDARG00000002194 269 1.575 0.849 0.726 - - - - - - - Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
73. si:ch211-197l9.2 ENSDARG00000078244 655 1.573 - 0.786 - - - - 0.787 - - si:ch211-197l9.2 [Source:ZFIN;Acc:ZDB-GENE-091204-369]
74. C13H10orf71 3489 1.572 - 0.843 - - - - 0.729 - - chromosome 13 C10orf71 homolog
75. xirp2a ENSDARG00000071113 7113 1.572 - 0.808 - - - - 0.764 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
76. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 1.572 - 0.801 - - - - 0.771 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
77. dyrk2 ENSDARG00000094646 2163 1.571 - 0.856 - - - - 0.715 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
78. zgc:158296 ENSDARG00000070923 3935 1.569 - 0.855 - - - - 0.714 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
79. EHBP1L1 EHBP1L1 2500 1.568 - 0.824 - - - - 0.744 - -
80. si:busm1-118j2.5 si:busm1-118j2.5 10462 1.564 0.773 0.791 - - - - - - -
81. BX294434.1 ENSDARG00000061272 6493 1.563 - 0.839 - - - - 0.724 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
82. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.56 - 0.859 - - - - 0.701 - -
83. CABZ01062780.1 CABZ01062780.1 250 1.559 - 0.787 - - - - 0.772 - -
84. nt5dc3 ENSDARG00000062949 816 1.559 - 0.827 - - - - 0.732 - - 5'-nucleotidase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080523-3]
85. pa2g4b ENSDARG00000070657 7999 1.558 - 0.748 - - - - 0.810 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
86. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 1.556 - - - - - 0.730 0.826 - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
87. gypc ENSDARG00000041546 1487 1.555 - 0.849 - - - - 0.706 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
88. si:dkey-65j6.2 ENSDARG00000103586 533 1.553 - - - - - 0.816 0.737 - - si:dkey-65j6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-319]
89. rpf2 ENSDARG00000043960 2719 1.552 - 0.827 - - - 0.725 - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
90. tjap1 ENSDARG00000010681 457 1.551 0.781 0.770 - - - - - - - tight junction associated protein 1 (peripheral) [Source:ZFIN;Acc:ZDB-GENE-081107-47]
91. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 1.548 - 0.805 - - - 0.743 - - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
92. hapln1a ENSDARG00000089769 12334 1.544 - 0.835 - - - - 0.709 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
93. CR450814.3 CR450814.3 608 1.541 - 0.824 - - - 0.717 - - -
94. NRAP ENSDARG00000009341 3565 1.54 - 0.825 - - - - 0.715 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
95. CABZ01043311.1 CABZ01043311.1 475 1.539 0.739 0.800 - - - - - - -
96. fitm1 ENSDARG00000056464 1759 1.538 - 0.832 - - - - 0.706 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
97. plcd4a ENSDARG00000057975 241 1.536 - 0.759 - - - 0.777 - - - phospholipase C, delta 4a [Source:ZFIN;Acc:ZDB-GENE-050208-654]
98. lrrc20 ENSDARG00000105018 1970 1.536 - 0.777 - - - - 0.759 - - leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
99. pygmb ENSDARG00000013317 5454 1.534 - 0.801 - - - - 0.733 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
100. ATP5J_2 ATP5J_2 2381 1.533 - 0.779 - - - - 0.754 - -

There are 1440 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA