Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for foxa_1

Gene Name Gene ID Reads Annotation
foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]










Genes with expression patterns similar to foxa_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 2 - - - - 1.000 - - 1.000 - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
2. U4_1 U4_1 2 1.839 - - - - 1.000 - - 0.839 -
3. eif3bb ENSDARG00000074213 2 1 - - - - 1.000 - - - - eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175]
4. AL935125.1 AL935125.1 0 1 - - - - 1.000 - - - -
5. asip asip 2 1 - - - - 1.000 - - - -
6. SHISA7 SHISA7 1 1 - - - - 1.000 - - - -
7. si:dkey-233e3.5 si:dkey-233e3.5 7 1 - - - - 1.000 - - - -
8. fam219b ENSDARG00000104637 3 1 - - - - 1.000 - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
9. IL4I1 IL4I1 4 1 - - - - 1.000 - - - -
10. rhcga ENSDARG00000003203 7 1 - - - - 1.000 - - - - Rh family, C glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-070424-81]
11. apnl ENSDARG00000090900 21 1 - - - - 1.000 - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
12. si:dkey-11f4.7 ENSDARG00000099207 1 1 - - - - 1.000 - - - - si:dkey-11f4.7 [Source:ZFIN;Acc:ZDB-GENE-070912-361]
13. ms4a17a.2 ENSDARG00000105674 32 1 - - - - 1.000 - - - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
14. si:dkey-155d18.1 1 1 - - - - 1.000 - - - - si:dkey-155d18.1
15. BX324198.1 BX324198.1 12 1 - - - - 1.000 - - - -
16. cx52.9 ENSDARG00000086453 7 1 - - - - 1.000 - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
17. si:dkey-11f4.14 ENSDARG00000098461 35 1 - - - - 1.000 - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
18. BEGAIN_1 BEGAIN_1 7 1 - - - - 1.000 - - - -
19. taf4b ENSDARG00000075732 3 1 - - - - 1.000 - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
20. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - 1.000 - - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
21. U5_6 U5_6 0 1 - - - - 1.000 - - - -
22. ZNF337_14 ZNF337_14 4 1 - - - - 1.000 - - - -
23. FAM188B2 4 1 - - - - 1.000 - - - - family with sequence similarity 188, member B2
24. znf536 ENSDARG00000103648 6 1 - - - - 1.000 - - - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
25. CU856681.1 CU856681.1 7 1 - - - - 1.000 - - - -
26. FP103003.1_1 FP103003.1_1 6 1 - - - - 1.000 - - - -
27. fam131ba ENSDARG00000070952 26 1 - - - - 1.000 - - - - family with sequence similarity 131, member Ba [Source:ZFIN;Acc:ZDB-GENE-060503-616]
28. CABZ01044346.1 CABZ01044346.1 12 1 - - - - - - - 1.000 -
29. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - - - - 1.000 - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
30. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - - 1.000 - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
31. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - - - 1.000 - - - - carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
32. si:dkey-92j16.1 si:dkey-92j16.1 1 1 - - - - 1.000 - - - -
33. si:dkey-50i6.6 ENSDARG00000099009 0 1 - - - - 1.000 - - - - si:dkey-50i6.6 [Source:ZFIN;Acc:ZDB-GENE-081104-420]
34. pcdh1a6 ENSDARG00000097170 6 1 - - - - 1.000 - - - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
35. stxbp5l ENSDARG00000006383, ENSDARG00000110740 3 1 - - - - - - - 1.000 - syntaxin binding protein 5-like [Source:ZFIN;Acc:ZDB-GENE-041210-220]
36. si:dkey-14a7.4 si:dkey-14a7.4 5 1 - - - - 1.000 - - - -
37. CABZ01084323.1 ENSDARG00000104937 5 1 - - - - 1.000 - - - - protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
38. GPX2 ENSDARG00000089149 10 1 - - - - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
39. frmd3 ENSDARG00000059885 1 1 - - - - 1.000 - - - - FERM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070523-1]
40. BX927317.2 ENSDARG00000101263 4 1 - - - - 1.000 - - - -
41. FNDC3B FNDC3B 2 1 - - - - 1.000 - - - -
42. si:dkey-119g10.5 si:dkey-119g10.5 1 1 - - - - 1.000 - - - -
43. sstr3 ENSDARG00000014477 14 1 - - - - 1.000 - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
44. si:ch211-218d20.10 si:ch211-218d20.10 4 1 - - - - 1.000 - - - -
45. si:dkey-106c17.2 ENSDARG00000094994, ENSDARG00000098530 14 1 - - - - 1.000 - - - - si:dkey-106c17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-612]
46. BX897747.2 BX897747.2 1 1 - - - - 1.000 - - - -
47. NOTCH2NL NOTCH2NL 5 1 - - - - 1.000 - - - -
48. si:dkey-284p5.3 ENSDARG00000095638 4 1 - - - - 1.000 - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
49. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1 - - - - 1.000 - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
50. cnn1b ENSDARG00000102398 40 1 - - - - 1.000 - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
51. si:dkey-219e20.2 ENSDARG00000094224 3 1 - - - - 1.000 - - - - si:dkey-219e20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-105]
52. zgc:165627 zgc:165627 4 1 - - - - 1.000 - - - -
53. iffo1a ENSDARG00000062976 5 1 - - - - 1.000 - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
54. VASH1 ENSDARG00000092716 33 1 - - - - 1.000 - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
55. ugt5e1 ENSDARG00000058048 25 1 - - - - - - - 1.000 - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
56. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - 1.000 - - - -
57. wnt8a ENSDARG00000052910, ENSDARG00000078507 0 1 - - - - 1.000 - - - - wingless-type MMTV integration site family, member 8a [Source:ZFIN;Acc:ZDB-GENE-980526-332]
58. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - 1.000 - - - -
59. ASPG ENSDARG00000052942 1 1 - - - - 1.000 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
60. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - 1.000 - - - - si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
61. CABZ01089223.1 CABZ01089223.1 0 1 - - - - 1.000 - - - -
62. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - - - - 1.000 - - - -
63. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - - - - 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
64. U1_21 U1_21 0 1 - - - - 1.000 - - - -
65. si:ch211-253b18.3 si:ch211-253b18.3 4 1 - - - - 1.000 - - - -
66. si:ch211-286b5.2 ENSDARG00000096514 6 1 - - - - 1.000 - - - - si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
67. si:ch211-191a6.3 si:ch211-191a6.3 6 1 - - - - - - - 1.000 -
68. csrnp1b ENSDARG00000038429 10 1 - - - - 1.000 - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
69. XPO5 ENSDARG00000098868 3 1 - - - - - - - 1.000 - exportin 5 [Source:HGNC Symbol;Acc:HGNC:17675]
70. si:dkey-49n23.1 ENSDARG00000040920 3 1 - - - - 1.000 - - - - si:dkey-49n23.1 [Source:ZFIN;Acc:ZDB-GENE-050208-762]
71. zgc:194659 ENSDARG00000079347 17 1 - - - - 1.000 - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
72. nptx2b ENSDARG00000045164 5 1 - - - - 1.000 - - - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
73. si:dkey-222h21.4 1 1 - - - - - - - 1.000 - si:dkey-222h21.4
74. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - 1.000 - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
75. abcc13 ENSDARG00000062519 2 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
76. zgc:171318 zgc:171318 42 1 - - - - 1.000 - - - -
77. si:dkey-85n7.7 ENSDARG00000095893 0 1 - - - - 1.000 - - - - si:dkey-85n7.7 [Source:ZFIN;Acc:ZDB-GENE-110408-52]
78. GIGYF1_2 GIGYF1_2 22 1 - - - - 1.000 - - - -
79. cyp2k22 ENSDARG00000040433 13 1 - - - - - - - 1.000 - cytochrome P450, family 2, subfamily K, polypeptide 22 [Source:ZFIN;Acc:ZDB-GENE-040426-822]
80. crispld1a ENSDARG00000077275 7 1 - - - - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
81. RBM11 ENSDARG00000090202 15 1 - - - - 1.000 - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
82. HMHA1 HMHA1 2 1 - - - - 1.000 - - - -
83. pofut2 ENSDARG00000045175 6 1 - - - - 1.000 - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
84. ZC3H7B_1 ZC3H7B_1 0 1 - - - - 1.000 - - - -
85. itga6l ENSDARG00000056018 1 1 - - - - 1.000 - - - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
86. syngr1b ENSDARG00000103577 3 1 - - - - 1.000 - - - - synaptogyrin 1b [Source:ZFIN;Acc:ZDB-GENE-090624-2]
87. si:dkey-161j23.5 ENSDARG00000094441 11 1 - - - - 1.000 - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
88. si:ch211-201p7.9 si:ch211-201p7.9 2 1 - - - - 1.000 - - - -
89. si:ch211-251p5.6 si:ch211-251p5.6 0 1 - - - - 1.000 - - - -
90. si:dkey-57i11.4 si:dkey-57i11.4 0 1 - - - - 1.000 - - - -
91. lipt2 ENSDARG00000069852 14 1 - - - - 1.000 - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
92. si:dkey-115f9.3 7 1 - - - - 1.000 - - - - si:dkey-115f9.3, transcript variant X2
93. LEPROT 0 1 - - - - 1.000 - - - - leptin receptor overlapping transcript
94. AL929092.1_1 ENSDARG00000092217 3 1 - - - - 1.000 - - - -
95. si:ch211-210g13.5 ENSDARG00000062575 1 1 - - - - 1.000 - - - - si:ch211-210g13.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5675]
96. ush1g ush1g 0 1 - - - - 1.000 - - - -
97. FNDC7_2 FNDC7_2 18 1 - - - - 1.000 - - - -
98. rce1a ENSDARG00000077909 4 1 - - - - 1.000 - - - - Ras converting CAAX endopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-041008-116]
99. mir30b 4 1 - - - - 1.000 - - - - microRNA 30b
100. hook2 ENSDARG00000039309, ENSDARG00000099235 0 1 - - - - 1.000 - - - - hook microtubule-tethering protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1636]

There are 148 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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