Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for foxa_1

Gene Name Gene ID Reads Annotation
foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]










Genes with expression patterns similar to foxa_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 2 - - - - 1.000 - - 1.000 - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
2. U4_1 U4_1 2 1.839 - - - - 1.000 - - 0.839 -
3. zgc:153654 ENSDARG00000060322 9 1 - - - - 1.000 - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
4. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - - - - 1.000 - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
5. DHDH DHDH 15 1 - - - - 1.000 - - - -
6. ugt5e1 ENSDARG00000058048 25 1 - - - - - - - 1.000 - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
7. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1 - - - - 1.000 - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
8. si:ch211-191a6.3 si:ch211-191a6.3 6 1 - - - - - - - 1.000 -
9. FNDC3B FNDC3B 2 1 - - - - 1.000 - - - -
10. si:dkey-167k11.1 si:dkey-167k11.1 14 1 - - - - 1.000 - - - -
11. AL935125.1 AL935125.1 0 1 - - - - 1.000 - - - -
12. crispld1a ENSDARG00000077275 7 1 - - - - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
13. asip asip 2 1 - - - - 1.000 - - - -
14. CABZ01089223.1 CABZ01089223.1 0 1 - - - - 1.000 - - - -
15. CT027705.3 CT027705.3 9 1 - - - - 1.000 - - - -
16. stxbp5l ENSDARG00000006383, ENSDARG00000110740 3 1 - - - - - - - 1.000 - syntaxin binding protein 5-like [Source:ZFIN;Acc:ZDB-GENE-041210-220]
17. BX005256.5 BX005256.5 25 1 - - - - 1.000 - - - -
18. si:ch211-218d20.10 si:ch211-218d20.10 4 1 - - - - 1.000 - - - -
19. sstr3 ENSDARG00000014477 14 1 - - - - 1.000 - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
20. si:dkey-158e13.14 si:dkey-158e13.14 1 1 - - - - - - - 1.000 -
21. CNGA1 3 1 - - - - 1.000 - - - - cyclic nucleotide gated channel alpha 1
22. si:ch211-173m16.2 ENSDARG00000093284 186 1 - - - - - - - 1.000 - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
23. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - - - 1.000 - - - - carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
24. abcc13 ENSDARG00000062519 2 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
25. apnl ENSDARG00000090900 21 1 - - - - 1.000 - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
26. CU856681.1 CU856681.1 7 1 - - - - 1.000 - - - -
27. FP103003.1_1 FP103003.1_1 6 1 - - - - 1.000 - - - -
28. fam19a1 7 1 - - - - 1.000 - - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
29. si:ch211-251p5.6 si:ch211-251p5.6 0 1 - - - - 1.000 - - - -
30. ghrhr2 ENSDARG00000099218, ENSDARG00000113154 1 1 - - - - 1.000 - - - - growth hormone releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-121214-194]
31. SYNPR ENSDARG00000037587 20 1 - - - - 1.000 - - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
32. CT030048.2 CT030048.2 3 1 - - - - 1.000 - - - -
33. itga6l ENSDARG00000056018 1 1 - - - - 1.000 - - - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
34. wnt3a ENSDARG00000058822 5 1 - - - - 1.000 - - - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
35. ush1g ush1g 0 1 - - - - 1.000 - - - -
36. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - - 1.000 - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
37. zgc:165627 zgc:165627 4 1 - - - - 1.000 - - - -
38. socs1a ENSDARG00000038095 20 1 - - - - 1.000 - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
39. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - 1.000 - - - -
40. ush2a ENSDARG00000029482 10 1 - - - - 1.000 - - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
41. si:dkey-161j23.5 ENSDARG00000094441 11 1 - - - - 1.000 - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
42. CABZ01056274.1 CABZ01056274.1 3 1 - - - - 1.000 - - - -
43. gna15.4 ENSDARG00000071416 2 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050208-781]
44. ZC3H7B_1 ZC3H7B_1 0 1 - - - - 1.000 - - - -
45. AL929092.1_1 ENSDARG00000092217 3 1 - - - - 1.000 - - - -
46. FNDC7_2 FNDC7_2 18 1 - - - - 1.000 - - - -
47. zgc:158321 zgc:158321 1 1 - - - - 1.000 - - - -
48. guca1a ENSDARG00000010454 9 1 - - - - 1.000 - - - - guanylate cyclase activator 1A [Source:ZFIN;Acc:ZDB-GENE-011128-5]
49. CABZ01112877.1 CABZ01112877.1 2 1 - - - - 1.000 - - - -
50. si:dkey-85n7.7 ENSDARG00000095893 0 1 - - - - 1.000 - - - - si:dkey-85n7.7 [Source:ZFIN;Acc:ZDB-GENE-110408-52]
51. RBM11 ENSDARG00000090202 15 1 - - - - 1.000 - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
52. otogl ENSDARG00000088750 2 1 - - - - 1.000 - - - - otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93]
53. mir30b 4 1 - - - - 1.000 - - - - microRNA 30b
54. CABZ01084323.1 ENSDARG00000104937 5 1 - - - - 1.000 - - - - protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
55. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - - - - 1.000 - - - -
56. zgc:194659 ENSDARG00000079347 17 1 - - - - 1.000 - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
57. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - 1.000 - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
58. CABZ01090980.1 CABZ01090980.1 6 1 - - - - 1.000 - - - -
59. GPX2 ENSDARG00000089149 10 1 - - - - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
60. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - - - - 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
61. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - 1.000 - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
62. csrnp1b ENSDARG00000038429 10 1 - - - - 1.000 - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
63. U6_7 U6_7 0 1 - - - - 1.000 - - - -
64. si:dkey-222h21.4 1 1 - - - - - - - 1.000 - si:dkey-222h21.4
65. VSIG10L ENSDARG00000089237 12 1 - - - - 1.000 - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
66. C24H7orf10_1 C24H7orf10_1 0 1 - - - - 1.000 - - - -
67. taf4b ENSDARG00000075732 3 1 - - - - 1.000 - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
68. ZCCHC6 2 1 - - - - 1.000 - - - - zinc finger, CCHC domain containing 6
69. si:dkey-155d18.1 1 1 - - - - 1.000 - - - - si:dkey-155d18.1
70. si:ch211-210g13.5 ENSDARG00000062575 1 1 - - - - 1.000 - - - - si:ch211-210g13.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5675]
71. ZNF337_14 ZNF337_14 4 1 - - - - 1.000 - - - -
72. si:dkey-14a7.4 si:dkey-14a7.4 5 1 - - - - 1.000 - - - -
73. dao.2 ENSDARG00000035603 8 1 - - - - 1.000 - - - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
74. SHISA7 SHISA7 1 1 - - - - 1.000 - - - -
75. si:dkey-11f4.14 ENSDARG00000098461 35 1 - - - - 1.000 - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
76. si:dkey-4c15.9 ENSDARG00000092152 1 1 - - - - 1.000 - - - - si:dkey-4c15.9 [Source:ZFIN;Acc:ZDB-GENE-050420-80]
77. BX324198.1 BX324198.1 12 1 - - - - 1.000 - - - -
78. znf536 ENSDARG00000103648 6 1 - - - - 1.000 - - - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
79. si:dkey-57i11.4 si:dkey-57i11.4 0 1 - - - - 1.000 - - - -
80. iffo1a ENSDARG00000062976 5 1 - - - - 1.000 - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
81. cnn1b ENSDARG00000102398 40 1 - - - - 1.000 - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
82. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - - - - 1.000 - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
83. hook2 ENSDARG00000039309, ENSDARG00000099235 0 1 - - - - 1.000 - - - - hook microtubule-tethering protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1636]
84. ZSWIM2 ENSDARG00000075700 8 1 - - - - 1.000 - - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
85. TRIM14_8 TRIM14_8 5 1 - - - - - - - 1.000 -
86. CABZ01067175.1 ENSDARG00000100401 0 1 - - - - 1.000 - - - - T-cell leukemia homeobox protein 3-like [Source:NCBI gene;Acc:100008066]
87. fam219b ENSDARG00000104637 3 1 - - - - 1.000 - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
88. BEGAIN_1 BEGAIN_1 7 1 - - - - 1.000 - - - -
89. or111-9 ENSDARG00000092238 0 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 9 [Source:ZFIN;Acc:ZDB-GENE-010308-11]
90. or125-2 ENSDARG00000094714 0 1 - - - - 1.000 - - - - odorant receptor, family E, subfamily 125, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-92]
91. si:dkey-92j16.1 si:dkey-92j16.1 1 1 - - - - 1.000 - - - -
92. ftr03 8 1 - - - - 1.000 - - - - finTRIM family, member 3
93. wisp2 ENSDARG00000077882 3 1 - - - - 1.000 - - - - WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
94. si:ch211-201p7.9 si:ch211-201p7.9 2 1 - - - - 1.000 - - - -
95. si:dkey-49n23.1 ENSDARG00000040920 3 1 - - - - 1.000 - - - - si:dkey-49n23.1 [Source:ZFIN;Acc:ZDB-GENE-050208-762]
96. si:dkey-266h18.3 si:dkey-266h18.3 4 1 - - - - - - - 1.000 -
97. lipt2 ENSDARG00000069852 14 1 - - - - 1.000 - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
98. BX897747.2 BX897747.2 1 1 - - - - 1.000 - - - -
99. si:ch211-253b18.3 si:ch211-253b18.3 4 1 - - - - 1.000 - - - -
100. si:dkey-22h13.5 0 1 - - - - 1.000 - - - - si:dkey-22h13.5, transcript variant X4

There are 148 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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