Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for foxa_1

Gene Name Gene ID Reads Annotation
foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]










Genes with expression patterns similar to foxa_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 2 - - - - 1.000 - - 1.000 - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
2. U4_1 U4_1 2 1.839 - - - - 1.000 - - 0.839 -
3. LEPROT 0 1 - - - - 1.000 - - - - leptin receptor overlapping transcript
4. CT030048.2 CT030048.2 3 1 - - - - 1.000 - - - -
5. lipt2 ENSDARG00000069852 14 1 - - - - 1.000 - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
6. CR848025.1 ENSDARG00000100501 35 1 - - - - 1.000 - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
7. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - 1.000 - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
8. VASH1 ENSDARG00000092716 33 1 - - - - 1.000 - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
9. SHISA7 SHISA7 1 1 - - - - 1.000 - - - -
10. si:ch73-138e16.6 ENSDARG00000101044 2 1 - - - - 1.000 - - - - si:ch73-138e16.6 [Source:ZFIN;Acc:ZDB-GENE-070705-205]
11. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - - - - 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
12. si:dkey-119g10.5 si:dkey-119g10.5 1 1 - - - - 1.000 - - - -
13. ASPG ENSDARG00000052942 1 1 - - - - 1.000 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
14. rce1a ENSDARG00000077909 4 1 - - - - 1.000 - - - - Ras converting CAAX endopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-041008-116]
15. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - - - - 1.000 - - - -
16. C24H7orf10_1 C24H7orf10_1 0 1 - - - - 1.000 - - - -
17. CABZ01089223.1 CABZ01089223.1 0 1 - - - - 1.000 - - - -
18. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - - 1.000 - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
19. anpepa ENSDARG00000041083, ENSDARG00000111591 5 1 - - - - - - - 1.000 - alanyl (membrane) aminopeptidase a [Source:ZFIN;Acc:ZDB-GENE-030131-4781]
20. iffo1a ENSDARG00000062976 5 1 - - - - 1.000 - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
21. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - 1.000 - - - -
22. syngr1b ENSDARG00000103577 3 1 - - - - 1.000 - - - - synaptogyrin 1b [Source:ZFIN;Acc:ZDB-GENE-090624-2]
23. VSIG10L ENSDARG00000089237 12 1 - - - - 1.000 - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
24. si:dkey-161j23.5 ENSDARG00000094441 11 1 - - - - 1.000 - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
25. mhc1zaa ENSDARG00000092162 2 1 - - - - - - - 1.000 - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
26. HMHA1 HMHA1 2 1 - - - - 1.000 - - - -
27. si:ch211-253b18.3 si:ch211-253b18.3 4 1 - - - - 1.000 - - - -
28. csrnp1b ENSDARG00000038429 10 1 - - - - 1.000 - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
29. ZNF337_14 ZNF337_14 4 1 - - - - 1.000 - - - -
30. si:dkey-26g8.9 si:dkey-26g8.9 2 1 - - - - 1.000 - - - -
31. si:dkey-155d18.1 1 1 - - - - 1.000 - - - - si:dkey-155d18.1
32. hook2 ENSDARG00000039309, ENSDARG00000099235 0 1 - - - - 1.000 - - - - hook microtubule-tethering protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1636]
33. si:dkey-284p5.3 ENSDARG00000095638 4 1 - - - - 1.000 - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
34. TMC2_1 TMC2_1 0 1 - - - - 1.000 - - - -
35. FP103003.1_1 FP103003.1_1 6 1 - - - - 1.000 - - - -
36. si:dkey-176g4.5 si:dkey-176g4.5 4 1 - - - - 1.000 - - - -
37. ftr03 8 1 - - - - 1.000 - - - - finTRIM family, member 3
38. wnt3a ENSDARG00000058822 5 1 - - - - 1.000 - - - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
39. crispld1a ENSDARG00000077275 7 1 - - - - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
40. si:dkey-92j16.1 si:dkey-92j16.1 1 1 - - - - 1.000 - - - -
41. GIGYF1_2 GIGYF1_2 22 1 - - - - 1.000 - - - -
42. znf536 ENSDARG00000103648 6 1 - - - - 1.000 - - - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
43. si:ch211-191a6.3 si:ch211-191a6.3 6 1 - - - - - - - 1.000 -
44. SYNPR ENSDARG00000037587 20 1 - - - - 1.000 - - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
45. ms4a17a.2 ENSDARG00000105674 32 1 - - - - 1.000 - - - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
46. si:ch73-366i20.1_1 ENSDARG00000092949 1 1 - - - - 1.000 - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
47. si:dkey-11f4.7 ENSDARG00000099207 1 1 - - - - 1.000 - - - - si:dkey-11f4.7 [Source:ZFIN;Acc:ZDB-GENE-070912-361]
48. fam131ba ENSDARG00000070952 26 1 - - - - 1.000 - - - - family with sequence similarity 131, member Ba [Source:ZFIN;Acc:ZDB-GENE-060503-616]
49. wnt8a ENSDARG00000052910, ENSDARG00000078507 0 1 - - - - 1.000 - - - - wingless-type MMTV integration site family, member 8a [Source:ZFIN;Acc:ZDB-GENE-980526-332]
50. si:dkey-11f4.14 ENSDARG00000098461 35 1 - - - - 1.000 - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
51. 5S_rRNA_1 5S_rRNA_1 5 1 - - - - 1.000 - - - -
52. CNGA1 3 1 - - - - 1.000 - - - - cyclic nucleotide gated channel alpha 1
53. cnn1b ENSDARG00000102398 40 1 - - - - 1.000 - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
54. si:dkey-4c15.9 ENSDARG00000092152 1 1 - - - - 1.000 - - - - si:dkey-4c15.9 [Source:ZFIN;Acc:ZDB-GENE-050420-80]
55. dao.2 ENSDARG00000035603 8 1 - - - - 1.000 - - - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
56. pcgf5a ENSDARG00000071007, ENSDARG00000113711, ENSDARG00000114273 22 1 - - - - - - - 1.000 - polycomb group ring finger 5a [Source:ZFIN;Acc:ZDB-GENE-080723-33]
57. NOTCH2NL NOTCH2NL 5 1 - - - - 1.000 - - - -
58. Metazoa_SRP_28 Metazoa_SRP_28 0 1 - - - - 1.000 - - - -
59. si:dkey-266h18.3 si:dkey-266h18.3 4 1 - - - - - - - 1.000 -
60. ZC3H7B_1 ZC3H7B_1 0 1 - - - - 1.000 - - - -
61. AL935125.1 AL935125.1 0 1 - - - - 1.000 - - - -
62. si:ch211-249h16.8 ENSDARG00000093630 1 1 - - - - 1.000 - - - - si:ch211-249h16.8 [Source:ZFIN;Acc:ZDB-GENE-090311-36]
63. zgc:158321 zgc:158321 1 1 - - - - 1.000 - - - -
64. podn ENSDARG00000019025, ENSDARG00000113615 1 1 - - - - 1.000 - - - - podocan [Source:ZFIN;Acc:ZDB-GENE-100922-117]
65. ush1g ush1g 0 1 - - - - 1.000 - - - -
66. frmd3 ENSDARG00000059885 1 1 - - - - 1.000 - - - - FERM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070523-1]
67. asip asip 2 1 - - - - 1.000 - - - -
68. DHDH DHDH 15 1 - - - - 1.000 - - - -
69. ft2 ENSDARG00000109567 5 1 - - - - 1.000 - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
70. sh2d1aa ENSDARG00000095348 4 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
71. si:dkey-167k11.1 si:dkey-167k11.1 14 1 - - - - 1.000 - - - -
72. zgc:171318 zgc:171318 42 1 - - - - 1.000 - - - -
73. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - 1.000 - - - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
74. si:dkey-57i11.4 si:dkey-57i11.4 0 1 - - - - 1.000 - - - -
75. si:dkey-219e20.2 ENSDARG00000094224 3 1 - - - - 1.000 - - - - si:dkey-219e20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-105]
76. FNDC7_2 FNDC7_2 18 1 - - - - 1.000 - - - -
77. ZCCHC6 2 1 - - - - 1.000 - - - - zinc finger, CCHC domain containing 6
78. pcdh1a6 ENSDARG00000097170 6 1 - - - - 1.000 - - - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
79. CABZ01084323.1 ENSDARG00000104937 5 1 - - - - 1.000 - - - - protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
80. CU856681.1 CU856681.1 7 1 - - - - 1.000 - - - -
81. abcc13 ENSDARG00000062519 2 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
82. SYDE1 ENSDARG00000077440 4 1 - - - - 1.000 - - - - synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
83. fam19a1 7 1 - - - - 1.000 - - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
84. si:ch211-201p7.9 si:ch211-201p7.9 2 1 - - - - 1.000 - - - -
85. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - 1.000 - - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
86. or125-2 ENSDARG00000094714 0 1 - - - - 1.000 - - - - odorant receptor, family E, subfamily 125, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-92]
87. SMC1B ENSDARG00000014402 0 1 - - - - 1.000 - - - - structural maintenance of chromosomes 1B [Source:ZFIN;Acc:ZDB-GENE-091217-1]
88. si:dkey-158e13.14 si:dkey-158e13.14 1 1 - - - - - - - 1.000 -
89. BX927317.2 ENSDARG00000101263 4 1 - - - - 1.000 - - - -
90. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - 1.000 - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
91. U1_21 U1_21 0 1 - - - - 1.000 - - - -
92. zgc:153441 ENSDARG00000054797 9 1 - - - - 1.000 - - - - zgc:153441 [Source:ZFIN;Acc:ZDB-GENE-060825-39]
93. CABZ01067175.1 ENSDARG00000100401 0 1 - - - - 1.000 - - - - T-cell leukemia homeobox protein 3-like [Source:NCBI gene;Acc:100008066]
94. CABZ01090980.1 CABZ01090980.1 6 1 - - - - 1.000 - - - -
95. IL4I1 IL4I1 4 1 - - - - 1.000 - - - -
96. BRINP1 ENSDARG00000078302 0 1 - - - - 1.000 - - - - bone morphogenetic protein/retinoic acid inducible neural-specific 1 [Source:ZFIN;Acc:ZDB-GENE-130530-847]
97. wisp2 ENSDARG00000077882 3 1 - - - - 1.000 - - - - WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
98. fam219b ENSDARG00000104637 3 1 - - - - 1.000 - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
99. eif3bb ENSDARG00000074213 2 1 - - - - 1.000 - - - - eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175]
100. ubb ENSDARG00000093313, ENSDARG00000112953 4 1 - - - - 1.000 - - - - ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]

There are 148 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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