Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for foxa_1

Gene Name Gene ID Reads Annotation
foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]










Genes with expression patterns similar to foxa_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 2 - - - - 1.000 - - 1.000 - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
2. U4_1 U4_1 2 1.839 - - - - 1.000 - - 0.839 -
3. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - - - - 1.000 - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
4. cacna1aa ENSDARG00000037905 4 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
5. or111-9 ENSDARG00000092238 0 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 9 [Source:ZFIN;Acc:ZDB-GENE-010308-11]
6. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1 - - - - 1.000 - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
7. IL4I1 IL4I1 4 1 - - - - 1.000 - - - -
8. U1_21 U1_21 0 1 - - - - 1.000 - - - -
9. si:ch211-191a6.3 si:ch211-191a6.3 6 1 - - - - - - - 1.000 -
10. ftr03 8 1 - - - - 1.000 - - - - finTRIM family, member 3
11. itga6l ENSDARG00000056018 1 1 - - - - 1.000 - - - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
12. si:dkey-155d18.1 1 1 - - - - 1.000 - - - - si:dkey-155d18.1
13. NOTCH2NL NOTCH2NL 5 1 - - - - 1.000 - - - -
14. abcc13 ENSDARG00000062519 2 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
15. si:ch211-201p7.9 si:ch211-201p7.9 2 1 - - - - 1.000 - - - -
16. AL929092.1_1 ENSDARG00000092217 3 1 - - - - 1.000 - - - -
17. csrnp1b ENSDARG00000038429 10 1 - - - - 1.000 - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
18. zgc:194659 ENSDARG00000079347 17 1 - - - - 1.000 - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
19. U1_40 U1_40 0 1 - - - - 1.000 - - - -
20. si:dkey-233e3.5 si:dkey-233e3.5 7 1 - - - - 1.000 - - - -
21. si:ch211-173m16.2 ENSDARG00000093284 186 1 - - - - - - - 1.000 - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
22. CU856681.1 CU856681.1 7 1 - - - - 1.000 - - - -
23. SHISA7 SHISA7 1 1 - - - - 1.000 - - - -
24. lipt2 ENSDARG00000069852 14 1 - - - - 1.000 - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
25. anpepa ENSDARG00000041083, ENSDARG00000111591 5 1 - - - - - - - 1.000 - alanyl (membrane) aminopeptidase a [Source:ZFIN;Acc:ZDB-GENE-030131-4781]
26. cx52.9 ENSDARG00000086453 7 1 - - - - 1.000 - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
27. si:dkey-50i6.6 ENSDARG00000099009 0 1 - - - - 1.000 - - - - si:dkey-50i6.6 [Source:ZFIN;Acc:ZDB-GENE-081104-420]
28. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - 1.000 - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
29. BX927317.2 ENSDARG00000101263 4 1 - - - - 1.000 - - - -
30. frmd3 ENSDARG00000059885 1 1 - - - - 1.000 - - - - FERM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070523-1]
31. ubb ENSDARG00000093313, ENSDARG00000112953 4 1 - - - - 1.000 - - - - ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
32. si:dkey-106c17.2 ENSDARG00000094994, ENSDARG00000098530 14 1 - - - - 1.000 - - - - si:dkey-106c17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-612]
33. si:dkey-115f9.3 7 1 - - - - 1.000 - - - - si:dkey-115f9.3, transcript variant X2
34. LEPROT 0 1 - - - - 1.000 - - - - leptin receptor overlapping transcript
35. si:ch211-218d20.10 si:ch211-218d20.10 4 1 - - - - 1.000 - - - -
36. osmr ENSDARG00000100738 2 1 - - - - 1.000 - - - - oncostatin M receptor [Source:ZFIN;Acc:ZDB-GENE-060526-48]
37. C24H7orf10_1 C24H7orf10_1 0 1 - - - - 1.000 - - - -
38. CT030048.2 CT030048.2 3 1 - - - - 1.000 - - - -
39. si:dkey-284p5.3 ENSDARG00000095638 4 1 - - - - 1.000 - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
40. ms4a17a.2 ENSDARG00000105674 32 1 - - - - 1.000 - - - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
41. BRINP1 ENSDARG00000078302 0 1 - - - - 1.000 - - - - bone morphogenetic protein/retinoic acid inducible neural-specific 1 [Source:ZFIN;Acc:ZDB-GENE-130530-847]
42. zgc:158321 zgc:158321 1 1 - - - - 1.000 - - - -
43. AL935125.1 AL935125.1 0 1 - - - - 1.000 - - - -
44. si:dkey-22h13.5 0 1 - - - - 1.000 - - - - si:dkey-22h13.5, transcript variant X4
45. wnt3a ENSDARG00000058822 5 1 - - - - 1.000 - - - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
46. U6_7 U6_7 0 1 - - - - 1.000 - - - -
47. apnl ENSDARG00000090900 21 1 - - - - 1.000 - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
48. ft2 ENSDARG00000109567 5 1 - - - - 1.000 - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
49. sstr3 ENSDARG00000014477 14 1 - - - - 1.000 - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
50. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - 1.000 - - - - si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
51. taf4b ENSDARG00000075732 3 1 - - - - 1.000 - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
52. TRIM14_8 TRIM14_8 5 1 - - - - - - - 1.000 -
53. fam131ba ENSDARG00000070952 26 1 - - - - 1.000 - - - - family with sequence similarity 131, member Ba [Source:ZFIN;Acc:ZDB-GENE-060503-616]
54. ush2a ENSDARG00000029482 10 1 - - - - 1.000 - - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
55. gna15.4 ENSDARG00000071416 2 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050208-781]
56. slc23a2 ENSDARG00000017365, ENSDARG00000114446 6 1 - - - - - - - 1.000 - solute carrier family 23 (ascorbic acid transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-090521-3]
57. si:ch211-249h16.8 ENSDARG00000093630 1 1 - - - - 1.000 - - - - si:ch211-249h16.8 [Source:ZFIN;Acc:ZDB-GENE-090311-36]
58. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - 1.000 - - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
59. CABZ01044346.1 CABZ01044346.1 12 1 - - - - - - - 1.000 -
60. ZNF337_14 ZNF337_14 4 1 - - - - 1.000 - - - -
61. si:dkey-85n7.7 ENSDARG00000095893 0 1 - - - - 1.000 - - - - si:dkey-85n7.7 [Source:ZFIN;Acc:ZDB-GENE-110408-52]
62. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - - - - 1.000 - - - -
63. FNDC7_2 FNDC7_2 18 1 - - - - 1.000 - - - -
64. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - 1.000 - - - -
65. HMHA1 HMHA1 2 1 - - - - 1.000 - - - -
66. si:dkey-219e20.2 ENSDARG00000094224 3 1 - - - - 1.000 - - - - si:dkey-219e20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-105]
67. 5S_rRNA_1 5S_rRNA_1 5 1 - - - - 1.000 - - - -
68. guca1a ENSDARG00000010454 9 1 - - - - 1.000 - - - - guanylate cyclase activator 1A [Source:ZFIN;Acc:ZDB-GENE-011128-5]
69. FAM188B2 4 1 - - - - 1.000 - - - - family with sequence similarity 188, member B2
70. si:dkey-49n23.1 ENSDARG00000040920 3 1 - - - - 1.000 - - - - si:dkey-49n23.1 [Source:ZFIN;Acc:ZDB-GENE-050208-762]
71. CABZ01112049.1 ENSDARG00000098538 0 1 - - - - 1.000 - - - - intestinal mucin-like protein [Source:NCBI gene;Acc:100332723]
72. ZCCHC6 2 1 - - - - 1.000 - - - - zinc finger, CCHC domain containing 6
73. CNGA1 3 1 - - - - 1.000 - - - - cyclic nucleotide gated channel alpha 1
74. stxbp5l ENSDARG00000006383, ENSDARG00000110740 3 1 - - - - - - - 1.000 - syntaxin binding protein 5-like [Source:ZFIN;Acc:ZDB-GENE-041210-220]
75. sh2d1aa ENSDARG00000095348 4 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
76. dao.2 ENSDARG00000035603 8 1 - - - - 1.000 - - - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
77. BX324198.1 BX324198.1 12 1 - - - - 1.000 - - - -
78. si:dkey-26g8.9 si:dkey-26g8.9 2 1 - - - - 1.000 - - - -
79. ush1g ush1g 0 1 - - - - 1.000 - - - -
80. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - - - 1.000 - - - - carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
81. pcdh1a6 ENSDARG00000097170 6 1 - - - - 1.000 - - - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
82. RBM11 ENSDARG00000090202 15 1 - - - - 1.000 - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
83. DHDH DHDH 15 1 - - - - 1.000 - - - -
84. fam19a1 7 1 - - - - 1.000 - - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
85. si:dkey-158e13.14 si:dkey-158e13.14 1 1 - - - - - - - 1.000 -
86. U5_6 U5_6 0 1 - - - - 1.000 - - - -
87. si:dkey-14a7.4 si:dkey-14a7.4 5 1 - - - - 1.000 - - - -
88. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - 1.000 - - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
89. FP103003.1_1 FP103003.1_1 6 1 - - - - 1.000 - - - -
90. TMC2_1 TMC2_1 0 1 - - - - 1.000 - - - -
91. pofut2 ENSDARG00000045175 6 1 - - - - 1.000 - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
92. cnn1b ENSDARG00000102398 40 1 - - - - 1.000 - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
93. si:ch211-210g13.5 ENSDARG00000062575 1 1 - - - - 1.000 - - - - si:ch211-210g13.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5675]
94. GPX2 ENSDARG00000089149 10 1 - - - - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
95. ghrhr2 ENSDARG00000099218, ENSDARG00000113154 1 1 - - - - 1.000 - - - - growth hormone releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-121214-194]
96. asip asip 2 1 - - - - 1.000 - - - -
97. VASH1 ENSDARG00000092716 33 1 - - - - 1.000 - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
98. rhcga ENSDARG00000003203 7 1 - - - - 1.000 - - - - Rh family, C glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-070424-81]
99. CABZ01112877.1 CABZ01112877.1 2 1 - - - - 1.000 - - - -
100. GIGYF1_2 GIGYF1_2 22 1 - - - - 1.000 - - - -

There are 148 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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