Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for foxa3

Gene Name Gene ID Reads Annotation
foxa3 ENSDARG00000012788 405 forkhead box A3 [Source:ZFIN;Acc:ZDB-GENE-980526-423]










Genes with expression patterns similar to foxa3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxa3 ENSDARG00000012788 405 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 forkhead box A3 [Source:ZFIN;Acc:ZDB-GENE-980526-423]
2. st3gal3b ENSDARG00000015252 465 1.636 - 0.830 - - - 0.806 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-050411-13]
3. VWA5A VWA5A 538 1.631 - 0.861 - - - - 0.770 - -
4. ankrd13a ENSDARG00000061901 1192 1.612 - 0.821 - - - - 0.791 - - ankyrin repeat domain 13A [Source:ZFIN;Acc:ZDB-GENE-030131-1833]
5. sema3ga ENSDARG00000042545 1603 1.608 - 0.848 - - - 0.760 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]
6. zgc:173726 ENSDARG00000077078 250 1.595 - 0.893 - - - - - 0.702 - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
7. adam28 ENSDARG00000035514, ENSDARG00000109685, ENSDARG00000111244 540 1.593 0.861 0.732 - - - - - - - ADAM metallopeptidase domain 28 [Source:ZFIN;Acc:ZDB-GENE-060929-532]
8. SOWAHA SOWAHA 419 1.583 - 0.785 - - - - 0.798 - -
9. ENSDARG00000058255 ENSDARG00000058255 1715 1.57 0.771 0.799 - - - - - - -
10. gna15.1 ENSDARG00000016364 754 1.559 - 0.713 - - - 0.846 - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040801-146]
11. rcbtb1 ENSDARG00000036645 255 1.543 - 0.775 - - - - 0.768 - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
12. scarb1 ENSDARG00000101557 503 1.537 - - 0.782 - - - - 0.755 - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
13. si:rp71-1i20.2 ENSDARG00000043198 113 1.511 - 0.724 - - - - 0.787 - - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
14. doc2d ENSDARG00000079962 76 1.508 - - 0.732 - - - 0.776 - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
15. AL929007.2 AL929007.2 117 1.505 - - 0.770 - - 0.735 - - -
16. cdc14ab ENSDARG00000057016 1016 1.501 - 0.771 - - - - 0.730 - - cell division cycle 14Ab [Source:ZFIN;Acc:ZDB-GENE-070705-309]
17. msrb1b ENSDARG00000045160, ENSDARG00000062442, ENSDARG00000115408 1682 1.501 - 0.755 - - - - 0.746 - - methionine sulfoxide reductase B1b [Source:ZFIN;Acc:ZDB-GENE-040912-88]
18. SAC3D1 SAC3D1 72 1.438 - - 0.712 - - - 0.726 - -
19. eps8l3 eps8l3 144 1.43 - 0.726 0.704 - - - - - -
20. CERS4 CERS4 319 1.422 - 0.708 - - - - 0.714 - -
21. zgc:158398 ENSDARG00000074226 418 1.412 - 0.712 - - - 0.700 - - - zgc:158398 [Source:ZFIN;Acc:ZDB-GENE-070820-3]
22. f7 ENSDARG00000034862 405 1.409 0.707 - 0.702 - - - - - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
23. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 0.933 - 0.933 - - - - - - - NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
24. eml2 ENSDARG00000008808 706 0.914 0.914 - - - - - - - - echinoderm microtubule associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-050706-71]
25. CU856237.1 CU856237.1 153 0.913 - 0.913 - - - - - - -
26. C3_2 C3_2 1084 0.908 - 0.908 - - - - - - -
27. elf3 ENSDARG00000077982 211 0.894 - 0.894 - - - - - - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
28. retsat ENSDARG00000018600 832 0.884 - 0.884 - - - - - - - retinol saturase (all-trans-retinol 13,14-reductase) [Source:ZFIN;Acc:ZDB-GENE-050320-11]
29. stx8 ENSDARG00000103173 180 0.88 - 0.880 - - - - - - - syntaxin 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1360]
30. ZC3H11A ENSDARG00000009754 281 0.876 - 0.876 - - - - - - - zinc finger CCCH-type containing 11A [Source:ZFIN;Acc:ZDB-GENE-030131-3272]
31. ccnh ENSDARG00000007657 745 0.875 - - - - - - 0.875 - - cyclin H [Source:ZFIN;Acc:ZDB-GENE-050320-13]
32. pan2 ENSDARG00000074675 641 0.871 - 0.871 - - - - - - - poly(A) specific ribonuclease subunit PAN2 [Source:ZFIN;Acc:ZDB-GENE-030131-3113]
33. dnal1 ENSDARG00000034042 339 0.868 - 0.868 - - - - - - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
34. sepp1b 1004 0.866 - - - - - - 0.866 - - selenoprotein P, plasma, 1b
35. WDR48 WDR48 448 0.865 0.865 - - - - - - - -
36. crabp2b ENSDARG00000030449 3091 0.863 - 0.863 - - - - - - - cellular retinoic acid binding protein 2, b [Source:ZFIN;Acc:ZDB-GENE-050208-52]
37. CU683898.1 CU683898.1 203 0.858 - 0.858 - - - - - - -
38. tle2 5014 0.857 - 0.857 - - - - - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
39. fggy ENSDARG00000038667 535 0.857 0.857 - - - - - - - - FGGY carbohydrate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-040426-2461]
40. slc25a18 ENSDARG00000070717 787 0.856 - - - - - 0.856 - - - solute carrier family 25 (glutamate carrier), member 18 [Source:ZFIN;Acc:ZDB-GENE-041111-192]
41. akap9 ENSDARG00000079610 654 0.856 0.856 - - - - - - - - A kinase (PRKA) anchor protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-7276]
42. coasy ENSDARG00000042747 336 0.855 - - - - - - 0.855 - - CoA synthase [Source:ZFIN;Acc:ZDB-GENE-040912-137]
43. MXD4 ENSDARG00000054031 1165 0.852 - - - - - - 0.852 - - MAX dimerization protein 4 [Source:ZFIN;Acc:ZDB-GENE-050208-44]
44. SSUH2 SSUH2 16 0.852 0.852 - - - - - - - -
45. BX640398.1 ENSDARG00000097190 219 0.85 - 0.850 - - - - - - -
46. egr1 ENSDARG00000037421, ENSDARG00000115563 325 0.848 - - - - - - 0.848 - - early growth response 1 [Source:ZFIN;Acc:ZDB-GENE-980526-320]
47. PEG3_6 PEG3_6 700 0.848 - - - - - - 0.848 - -
48. znf385b ENSDARG00000006065 817 0.847 - 0.847 - - - - - - - zinc finger protein 385B [Source:ZFIN;Acc:ZDB-GENE-030616-154]
49. BX470211.1 ENSDARG00000105629 111 0.844 - 0.844 - - - - - - -
50. gna14 ENSDARG00000035178 618 0.843 - - - - - - 0.843 - - guanine nucleotide binding protein (G protein), alpha 14 [Source:ZFIN;Acc:ZDB-GENE-040808-7]
51. msxc msxc 3142 0.843 - 0.843 - - - - - - -
52. dlx3b ENSDARG00000014626 3647 0.843 - - - - - - 0.843 - - distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
53. TMEM120A ENSDARG00000030914 266 0.842 - - - - - - 0.842 - - transmembrane protein 120A [Source:ZFIN;Acc:ZDB-GENE-070424-21]
54. dhdhl ENSDARG00000028336 844 0.842 0.842 - - - - - - - - dihydrodiol dehydrogenase (dimeric), like [Source:ZFIN;Acc:ZDB-GENE-040426-2180]
55. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 0.841 - - - - - 0.841 - - - calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
56. zgc:113100 zgc:113100 647 0.839 - 0.839 - - - - - - -
57. acsl3a ENSDARG00000032079 897 0.837 - 0.837 - - - - - - - acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
58. agpat3 ENSDARG00000036549 1093 0.835 - 0.835 - - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
59. oip5 ENSDARG00000093597 329 0.832 - 0.832 - - - - - - - opa interacting protein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-328]
60. hoxd13a ENSDARG00000059256 1190 0.832 - 0.832 - - - - - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
61. notum1a ENSDARG00000031126 825 0.832 - 0.832 - - - - - - - notum, palmitoleoyl-protein carboxylesterase a [Source:ZFIN;Acc:ZDB-GENE-120807-2]
62. itpk1 itpk1 425 0.828 - 0.828 - - - - - - -
63. phyh ENSDARG00000086740 88 0.828 - - - - - - 0.828 - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
64. CREB3L4 1085 0.824 - 0.824 - - - - - - - cAMP responsive element binding protein 3-like 4
65. zgc:66014 817 0.824 - 0.824 - - - - - - - zgc:66014, transcript variant X6
66. EMP3 EMP3 523 0.823 - 0.823 - - - - - - -
67. OSCP1 ENSDARG00000101888 59 0.823 - - - - - - 0.823 - - organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
68. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 0.822 - 0.822 - - - - - - - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
69. FP326665.1 FP326665.1 1893 0.821 - - - - - - 0.821 - -
70. MTMR4 1374 0.82 - - - - - - 0.820 - - myotubularin related protein 4, transcript variant X3
71. rpe65c ENSDARG00000054420, ENSDARG00000113640 28 0.82 - - - - - - 0.820 - - retinal pigment epithelium-specific protein 65c [Source:ZFIN;Acc:ZDB-GENE-081104-505]
72. flcn ENSDARG00000062385, ENSDARG00000116055 614 0.82 - - - - - - 0.820 - - folliculin [Source:ZFIN;Acc:ZDB-GENE-060421-3470]
73. isl2a ENSDARG00000003971 971 0.819 - 0.819 - - - - - - - ISL LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-562]
74. tyw1 ENSDARG00000062987 1759 0.819 - - - - - - 0.819 - - tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-688]
75. C19H1orf51 C19H1orf51 1776 0.818 - 0.818 - - - - - - -
76. TMEM30B ENSDARG00000054122 1519 0.818 - 0.818 - - - - - - - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
77. tnfrsf21 ENSDARG00000001807 239 0.818 - 0.818 - - - - - - - tumor necrosis factor receptor superfamily, member 21 [Source:ZFIN;Acc:ZDB-GENE-030131-5971]
78. gata1a ENSDARG00000013477, ENSDARG00000117116 902 0.817 - - - - - - - 0.817 - GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
79. gng12a ENSDARG00000003375 1250 0.817 - 0.817 - - - - - - - guanine nucleotide binding protein (G protein), gamma 12a [Source:ZFIN;Acc:ZDB-GENE-040426-2555]
80. gabbr2 ENSDARG00000061042 122 0.814 - - - - - - 0.814 - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:ZFIN;Acc:ZDB-GENE-060503-620]
81. twf1b ENSDARG00000011661 630 0.814 - 0.814 - - - - - - - twinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
82. nprl3 ENSDARG00000010918 339 0.813 - - - - - 0.813 - - - NPR3-like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-1348]
83. ap1s3b ENSDARG00000027966 1064 0.811 - 0.811 - - - - - - - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
84. brox ENSDARG00000013659 1334 0.81 - - - - - - 0.810 - - BRO1 domain and CAAX motif containing [Source:ZFIN;Acc:ZDB-GENE-041114-137]
85. ch1073-291c23.1 2426 0.809 - 0.809 - - - - - - - ch1073-291c23.1, transcript variant X6
86. LPHN1 LPHN1 152 0.808 - - - - - - 0.808 - -
87. hpcal4 ENSDARG00000070491 365 0.808 0.808 - - - - - - - - hippocalcin like 4 [Source:ZFIN;Acc:ZDB-GENE-060503-307]
88. vps11 ENSDARG00000036338 421 0.807 - 0.807 - - - - - - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
89. ECI2 ENSDARG00000102412 848 0.806 - 0.806 - - - - - - - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
90. tollip ENSDARG00000098486 1118 0.805 - 0.805 - - - - - - - toll interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-8820]
91. gnb1b ENSDARG00000104372 1077 0.804 - 0.804 - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
92. NEK3 ENSDARG00000058869 55 0.804 - 0.804 - - - - - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
93. ftr29 ENSDARG00000075355 172 0.803 - - - - - - 0.803 - - finTRIM family, member 29 [Source:ZFIN;Acc:ZDB-GENE-050417-159]
94. si:ch211-106k21.5 ENSDARG00000086052 684 0.802 - - - - - - - 0.802 - si:ch211-106k21.5 [Source:ZFIN;Acc:ZDB-GENE-070912-7]
95. HHLA2 HHLA2 295 0.802 - 0.802 - - - - - - -
96. mmp14a ENSDARG00000002235 911 0.801 0.801 - - - - - - - - matrix metallopeptidase 14a (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-1]
97. sft2d1 ENSDARG00000007362 1763 0.8 - 0.800 - - - - - - - SFT2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1350]
98. zgc:109934 ENSDARG00000094210, ENSDARG00000113150 398 0.8 - 0.800 - - - - - - - zgc:109934 [Source:ZFIN;Acc:ZDB-GENE-050522-428]
99. dus4l ENSDARG00000006567 261 0.799 - - - - - - 0.799 - - dihydrouridine synthase 4-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-233]
100. spint1a ENSDARG00000102332 1930 0.799 - - - - - - 0.799 - - serine peptidase inhibitor, Kunitz type 1 a [Source:ZFIN;Acc:ZDB-GENE-040426-2169]

There are 556 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA