Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for foxa

Gene Name Gene ID Reads Annotation
foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]










Genes with expression patterns similar to foxa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 5 1.000 - 1.000 1.000 - - 1.000 1.000 - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
2. BX000348.1 BX000348.1 2 2 1.000 - - - - - - 1.000 -
3. antxr1a ENSDARG00000025672 32 1.972 - - 0.972 - - - 1.000 - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
4. DNAI1 DNAI1 11 1.96 0.960 - - - - - 1.000 - -
5. CU457778.1 ENSDARG00000098976 38 1.938 0.938 - - - - - 1.000 - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
6. si:ch73-381a20.2 si:ch73-381a20.2 11 1.936 0.984 - - - - - 0.952 - -
7. LYPLAL1 ENSDARG00000088764 87 1.925 0.978 - - - - - 0.947 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
8. rfc4 ENSDARG00000042458 2 1.915 - - - 0.915 - - 1.000 - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
9. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1.915 - - - 0.915 - - 1.000 - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
10. si:ch211-81g2.1 si:ch211-81g2.1 5 1.915 - - - 0.915 - - 1.000 - -
11. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1.889 - - 0.889 - - - 1.000 - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
12. acy3.1 ENSDARG00000093003 54 1.808 - - 0.818 - - - 0.990 - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
13. MTERFD2 MTERFD2 140 1.805 0.882 - - - - - 0.923 - -
14. FAM132B FAM132B 39 1.76 0.880 - - - - - 0.880 - -
15. si:dkey-97l20.5 si:dkey-97l20.5 33 1.703 - - 0.788 - - - 0.915 - -
16. rps8b ENSDARG00000057368 68 1.673 0.933 - - - - - - 0.740 - ribosomal protein S8b [Source:ZFIN;Acc:ZDB-GENE-050522-202]
17. CDH16 ENSDARG00000077570 78 1.664 - - 0.939 - - - - 0.725 - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
18. PCDH8 ENSDARG00000102185 52 1.563 0.852 - - - - - 0.711 - - protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
19. CU693366.1 CU693366.1 186 1.478 0.714 - - - - - 0.764 - -
20. sass6 ENSDARG00000058346 225 1.474 - - - 0.714 - - 0.760 - - SAS-6 centriolar assembly protein [Source:ZFIN;Acc:ZDB-GENE-040426-2784]
21. xrcc5 ENSDARG00000099298 835 1.461 - - - 0.744 - - 0.717 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
22. cacnb4b ENSDARG00000062174 159 1.455 0.735 - - - - - 0.720 - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
23. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - - - - - - 1.000 - -
24. TRPM6 ENSDARG00000103454 15 1 - - - - - - 1.000 - - transient receptor potential cation channel, subfamily M, member 6 [Source:ZFIN;Acc:ZDB-GENE-111212-1]
25. ATG4D_1 ATG4D_1 1 1 1.000 - - - - - - - -
26. si:zfos-2548d7.1 si:zfos-2548d7.1 3 1 1.000 - - - - - - - -
27. ovca2 ENSDARG00000103748 38 1 - - - - - - 1.000 - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
28. il11b ENSDARG00000058557 17 1 - - - - - - 1.000 - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
29. slc25a23b ENSDARG00000024708 51 1 1.000 - - - - - - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b [Source:ZFIN;Acc:ZDB-GENE-040724-220]
30. angptl2a ENSDARG00000024030 8 1 - - - - - - 1.000 - - angiopoietin-like 2a [Source:ZFIN;Acc:ZDB-GENE-080721-15]
31. ciita ENSDARG00000090851 5 1 - - - - - - 1.000 - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
32. klc1a ENSDARG00000009796 10 1 1.000 - - - - - - - - kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
33. CABZ01030262.1 CABZ01030262.1 11 1 - - - - - - - 1.000 -
34. si:dkey-258p11.3 si:dkey-258p11.3 9 1 - - - - - - 1.000 - -
35. nfil3-4 ENSDARG00000092346 3 1 - - - - - - 1.000 - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
36. ARHGEF40 ENSDARG00000078979 25 1 - - - - - - 1.000 - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
37. si:ch211-74m13.3 ENSDARG00000076144 55 1 1.000 - - - - - - - - si:ch211-74m13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-219]
38. hapln4 ENSDARG00000018542 10 1 - - - 1.000 - - - - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
39. cldn11a ENSDARG00000020031 284 1 - - - - - - 1.000 - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
40. il34 ENSDARG00000091003 14 1 1.000 - - - - - - - - interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
41. HYKK_1 HYKK_1 4 1 - - - - - - 1.000 - -
42. si:dkey-234l24.2p si:dkey-234l24.2p 1 1 - - - - - - 1.000 - -
43. si:dkey-145c18.2 ENSDARG00000076694 1 1 - - - - - - - 1.000 - si:dkey-145c18.2 [Source:ZFIN;Acc:ZDB-GENE-081031-55]
44. calcr ENSDARG00000028845, ENSDARG00000109526 17 1 - - - - - - 1.000 - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
45. THSD7B THSD7B 15 1 1.000 - - - - - - - -
46. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - - - - 1.000 - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
47. CR388132.1 ENSDARG00000097728 61 1 - - - - - - 1.000 - -
48. CABZ01108997.2 CABZ01108997.2 1 1 - - - - - - 1.000 - -
49. CNGB3 CNGB3 7 1 - - - - - - - 1.000 -
50. ENKD1 ENSDARG00000043550 44 1 1.000 - - - - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
51. si:dkey-148b12.4 si:dkey-148b12.4 2 1 1.000 - - - - - - - -
52. si:dkey-222e15.4 10 1 - - - - - - 1.000 - - si:dkey-222e15.4, transcript variant X4
53. lmx1a ENSDARG00000020354 111 1 - - - - - - 1.000 - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
54. CABZ01112732.1 ENSDARG00000068453 4 1 1.000 - - - - - - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
55. RGS14 RGS14 15 1 - - - 1.000 - - - - -
56. GAS2 18 1 1.000 - - - - - - - - growth arrest specific 2, transcript variant X1
57. EFEMP1_1 EFEMP1_1 8 1 - - - - - - 1.000 - -
58. ENSDARG00000089996 ENSDARG00000089996 17 1 1.000 - - - - - - - -
59. batf3 ENSDARG00000042577 34 1 - - - - - - 1.000 - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
60. si:ch211-113a14.26 5 1 - - - - - - - 1.000 - si:ch211-113a14.26
61. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - - - 1.000 - -
62. GANC ENSDARG00000074556 36 1 1.000 - - - - - - - - glucosidase, alpha; neutral C [Source:ZFIN;Acc:ZDB-GENE-130530-754]
63. sumf2 ENSDARG00000069497 51 1 1.000 - - - - - - - - sulfatase modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-55]
64. mylka ENSDARG00000034801 133 1 1.000 - - - - - - - - myosin, light chain kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8207]
65. CU302436.1_1 ENSDARG00000114500 18 1 1.000 - - - - - - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
66. BX548011.3 ENSDARG00000113526 2 1 - - - - - - 1.000 - -
67. CR848814.2 CR848814.2 19 1 1.000 - - - - - - - -
68. PROC PROC 11 1 - - - - - - 1.000 - -
69. radil ENSDARG00000079779 14 1 1.000 - - - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
70. SNORD59 SNORD59 7 1 1.000 - - - - - - - -
71. npas2 ENSDARG00000016536, ENSDARG00000116993 35 1 - - - - - - 1.000 - - neuronal PAS domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030408-3]
72. si:ch211-232d10.3 ENSDARG00000104008 2 1 1.000 - - - - - - - - si:ch211-232d10.3 [Source:ZFIN;Acc:ZDB-GENE-081103-4]
73. GPR114 GPR114 1 1 - - - - - - 1.000 - -
74. M1AP ENSDARG00000099485 1 1 - - - - - - 1.000 - - meiosis 1 associated protein [Source:ZFIN;Acc:ZDB-GENE-070410-19]
75. map3k4 ENSDARG00000104835 34 1 1.000 - - - - - - - - mitogen-activated protein kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-990603-4]
76. BX324198.1 BX324198.1 12 1 1.000 - - - - - - - -
77. si:dkey-196n19.5 si:dkey-196n19.5 6 1 - - - - - - 1.000 - -
78. polm ENSDARG00000103470 49 1 - - - - - - 1.000 - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
79. BX005006.2 BX005006.2 1 1 1.000 - - - - - - - -
80. rnf150a_1 ENSDARG00000024827 12 1 - - - - - - 1.000 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
81. ZBED1_3 ZBED1_3 7 1 1.000 - - - - - - - -
82. capslb ENSDARG00000003414 77 1 - - - - - - 1.000 - - calcyphosine-like b [Source:ZFIN;Acc:ZDB-GENE-050417-298]
83. wfikkn2b ENSDARG00000059139 45 1 - - - - - - 1.000 - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
84. CR854899.1 ENSDARG00000102357 8 1 - - - - - - 1.000 - -
85. fpgt ENSDARG00000042139 155 1 1.000 - - - - - - - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
86. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 1 1.000 - - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
87. CABZ01112215.1 CABZ01112215.1 23 1 - - - - - - 1.000 - -
88. cers3b ENSDARG00000036337 1 1 - - - - - - 1.000 - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
89. lcp2a ENSDARG00000055955 23 1 1.000 - - - - - - - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
90. pde8b ENSDARG00000063706 1 1 - - - - - - - 1.000 - phosphodiesterase 8B [Source:ZFIN;Acc:ZDB-GENE-091117-3]
91. sult1st3 ENSDARG00000018361 7 1 - - - - - - 1.000 - - sulfotransferase family 1, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-030804-28]
92. BX511189.1 BX511189.1 34 1 - - - - - - 1.000 - -
93. si:ch73-138i16.1 ENSDARG00000095562 8 1 - - - 1.000 - - - - - si:ch73-138i16.1 [Source:ZFIN;Acc:ZDB-GENE-070705-208]
94. dcbld1 ENSDARG00000015907 36 1 - - - - - - 1.000 - - discoidin, CUB and LCCL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050913-77]
95. atad1b ENSDARG00000056609 40 1 1.000 - - - - - - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
96. rag1 ENSDARG00000052122 13 1 1.000 - - - - - - - - recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
97. nid2b ENSDARG00000009471 4 1 - - - - - - 1.000 - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
98. fut11 ENSDARG00000102402 56 1 1.000 - - - - - - - - fucosyltransferase 11 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-728]
99. adrb3b ENSDARG00000052919 16 1 - - - - - - 1.000 - - adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
100. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 1 1.000 - - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]

There are 791 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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