Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for foxa

Gene Name Gene ID Reads Annotation
foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]










Genes with expression patterns similar to foxa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 5 1.000 - 1.000 1.000 - - 1.000 1.000 - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
2. BX000348.1 BX000348.1 2 2 1.000 - - - - - - 1.000 -
3. antxr1a ENSDARG00000025672 32 1.972 - - 0.972 - - - 1.000 - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
4. DNAI1 DNAI1 11 1.96 0.960 - - - - - 1.000 - -
5. CU457778.1 ENSDARG00000098976 38 1.938 0.938 - - - - - 1.000 - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
6. si:ch73-381a20.2 si:ch73-381a20.2 11 1.936 0.984 - - - - - 0.952 - -
7. LYPLAL1 ENSDARG00000088764 87 1.925 0.978 - - - - - 0.947 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
8. si:ch211-81g2.1 si:ch211-81g2.1 5 1.915 - - - 0.915 - - 1.000 - -
9. rfc4 ENSDARG00000042458 2 1.915 - - - 0.915 - - 1.000 - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
10. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1.915 - - - 0.915 - - 1.000 - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
11. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1.889 - - 0.889 - - - 1.000 - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
12. acy3.1 ENSDARG00000093003 54 1.808 - - 0.818 - - - 0.990 - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
13. MTERFD2 MTERFD2 140 1.805 0.882 - - - - - 0.923 - -
14. FAM132B FAM132B 39 1.76 0.880 - - - - - 0.880 - -
15. si:dkey-97l20.5 si:dkey-97l20.5 33 1.703 - - 0.788 - - - 0.915 - -
16. rps8b ENSDARG00000057368 68 1.673 0.933 - - - - - - 0.740 - ribosomal protein S8b [Source:ZFIN;Acc:ZDB-GENE-050522-202]
17. CDH16 ENSDARG00000077570 78 1.664 - - 0.939 - - - - 0.725 - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
18. PCDH8 ENSDARG00000102185 52 1.563 0.852 - - - - - 0.711 - - protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
19. CU693366.1 CU693366.1 186 1.478 0.714 - - - - - 0.764 - -
20. sass6 ENSDARG00000058346 225 1.474 - - - 0.714 - - 0.760 - - SAS-6 centriolar assembly protein [Source:ZFIN;Acc:ZDB-GENE-040426-2784]
21. xrcc5 ENSDARG00000099298 835 1.461 - - - 0.744 - - 0.717 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
22. cacnb4b ENSDARG00000062174 159 1.455 0.735 - - - - - 0.720 - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
23. CU929225.1 CU929225.1 104 1 - - - - - - 1.000 - -
24. si:ch211-145b13.6 ENSDARG00000069998 1 1 - - - - - - - 1.000 - si:ch211-145b13.6 [Source:ZFIN;Acc:ZDB-GENE-090313-36]
25. diaph3_1 ENSDARG00000090785 3 1 - - - - - - - 1.000 - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
26. si:dkey-78a14.5 14 1 - - - - - - 1.000 - - si:dkey-78a14.5, transcript variant X2
27. CABZ01054405.2 CABZ01054405.2 46 1 1.000 - - - - - - - -
28. TNFRSF14_4 TNFRSF14_4 5 1 - - - - - - 1.000 - -
29. BX470224.1 ENSDARG00000092793 22 1 - - - - - - 1.000 - -
30. Metazoa_SRP_9 Metazoa_SRP_9 26 1 - - - - - - - 1.000 -
31. fgf3 ENSDARG00000101540 75 1 1.000 - - - - - - - - fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178]
32. RAB35 RAB35 4 1 - - - - - - - 1.000 -
33. c1qtnf1 ENSDARG00000088878 4 1 - - - - - - 1.000 - - C1q and TNF related 1 [Source:ZFIN;Acc:ZDB-GENE-050417-427]
34. C2CD5 ENSDARG00000094590 1 1 - - - - - - - 1.000 - C2 calcium-dependent domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-041114-193]
35. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - - - - - - 1.000 - -
36. TMEM8B_1 ENSDARG00000075126 1 1 - - - - - - - 1.000 - transmembrane protein 8B [Source:HGNC Symbol;Acc:HGNC:21427]
37. TRMT12 ENSDARG00000060338 58 1 1.000 - - - - - - - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
38. supt7l ENSDARG00000013461 41 1 - - - - - - 1.000 - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
39. PLXNB2_1 PLXNB2_1 10 1 - - - - - - 1.000 - -
40. slco2a1 ENSDARG00000061896 58 1 - - - - - - 1.000 - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
41. gja3 ENSDARG00000021889, ENSDARG00000116798 49 1 1.000 - - - - - - - - gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
42. cyp2k8 ENSDARG00000101190 69 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
43. pcsk7 ENSDARG00000069968 5 1 - - - - - - 1.000 - - proprotein convertase subtilisin/kexin type 7 [Source:ZFIN;Acc:ZDB-GENE-030131-7293]
44. capn3a ENSDARG00000041864 89 1 1.000 - - - - - - - - calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
45. nphs1 ENSDARG00000060758 5 1 - - - - - - 1.000 - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
46. si:dkey-211g8.7 ENSDARG00000058535 5 1 - - - - - - 1.000 - - si:dkey-211g8.7 [Source:ZFIN;Acc:ZDB-GENE-060503-907]
47. tcf23 ENSDARG00000087381 6 1 - - - - - - 1.000 - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
48. cyp39a1 ENSDARG00000017982 4 1 - - - - - - 1.000 - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
49. U2_5 U2_5 5 1 1.000 - - - - - - - -
50. n6amt2 7 1 - - - - - - 1.000 - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
51. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - - 1.000 - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
52. si:ch73-119o17.1 si:ch73-119o17.1 6 1 1.000 - - - - - - - -
53. SNORA14 SNORA14 10 1 - - - - - - - 1.000 -
54. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 1 1.000 - - - - - - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
55. BX649391.1 BX649391.1 2 1 1.000 - - - - - - - -
56. cyp46a2 cyp46a2 38 1 1.000 - - - - - - - -
57. ZBED1_1 ZBED1_1 3 1 1.000 - - - - - - - -
58. NACC2 160 1 - - - - - - 1.000 - - NACC family member 2
59. CHST15 ENSDARG00000074527 210 1 1.000 - - - - - - - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327]
60. FAM46A FAM46A 81 1 - - - - - - 1.000 - -
61. ENSDARG00000093467 ENSDARG00000093467 34 1 - - - - - - 1.000 - -
62. slc4a4b ENSDARG00000044808 9 1 1.000 - - - - - - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
63. si:dkey-57c22.1 ENSDARG00000093846 12 1 1.000 - - - - - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
64. adipoqa ENSDARG00000062228 7 1 - - - - - - 1.000 - - adiponectin, C1Q and collagen domain containing, a [Source:ZFIN;Acc:ZDB-GENE-080423-2]
65. CABZ01031998.1 CABZ01031998.1 3 1 - - - - - - 1.000 - -
66. MEP1B ENSDARG00000037533, ENSDARG00000115538 10 1 - - - - - - 1.000 - - meprin A, beta [Source:ZFIN;Acc:ZDB-GENE-041014-209]
67. soga3b ENSDARG00000075455 8 1 - - - - - - - 1.000 - SOGA family member 3b [Source:ZFIN;Acc:ZDB-GENE-081022-198]
68. si:dkey-1b17.3 si:dkey-1b17.3 16 1 - - - - - - 1.000 - -
69. btr05 ENSDARG00000074813 2 1 - - - - - - 1.000 - - bloodthirsty-related gene family, member 5 [Source:ZFIN;Acc:ZDB-GENE-080219-8]
70. si:ch211-198b21.6 si:ch211-198b21.6 1 1 - - - - - - 1.000 - -
71. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1 - - - - - - 1.000 - - sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
72. si:dkey-4c15.5 si:dkey-4c15.5 36 1 - - - - - - 1.000 - -
73. si:ch1073-416j23.1 ENSDARG00000055934 4 1 1.000 - - - - - - - - si:ch1073-416j23.1 [Source:ZFIN;Acc:ZDB-GENE-100922-35]
74. CU896555.1 CU896555.1 27 1 - - - - - - 1.000 - -
75. ZNF70_14 ZNF70_14 19 1 1.000 - - - - - - - -
76. HIST1H2BA ENSDARG00000116654 10 1 - - - - - - 1.000 - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
77. lrp2bp ENSDARG00000040478 21 1 - - - - - - 1.000 - - LRP2 binding protein [Source:ZFIN;Acc:ZDB-GENE-070615-41]
78. fip1l1a ENSDARG00000043328 7 1 - - - - - - - 1.000 - FIP1 like 1a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-8]
79. grid1b ENSDARG00000044161 20 1 - - - - - - 1.000 - - glutamate receptor, ionotropic, delta 1b [Source:ZFIN;Acc:ZDB-GENE-121214-84]
80. si:dkey-63d15.12 ENSDARG00000075480 9 1 1.000 - - - - - - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
81. CLDND1_1 CLDND1_1 50 1 - - - - - - 1.000 - -
82. si:dkey-228d14.8 si:dkey-228d14.8 3 1 - - - - - - 1.000 - -
83. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - - 1.000 - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
84. si:ch211-11i5.3 si:ch211-11i5.3 7 1 1.000 - - - - - - - -
85. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 - - - - - - 1.000 - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
86. SLC4A8 ENSDARG00000015531 16 1 1.000 - - - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
87. si:dkey-208k22.3 si:dkey-208k22.3 1 1 - - - - - - - 1.000 -
88. zgc:136930 ENSDARG00000055192 1208 1 1.000 - - - - - - - - zgc:136930 [Source:ZFIN;Acc:ZDB-GENE-060312-16]
89. si:ch211-76l23.4 ENSDARG00000096242 202 1 1.000 - - - - - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
90. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - - - - - 1.000 - -
91. si:dkeyp-69e1.9 si:dkeyp-69e1.9 29 1 - - - - - - 1.000 - -
92. CSF3 CSF3 4 1 - - - - - - 1.000 - -
93. FP245525.1 FP245525.1 3 1 1.000 - - - - - - - -
94. KEL ENSDARG00000076950 159 1 1.000 - - - - - - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
95. C12H10orf107 C12H10orf107 8 1 - - - - - - - 1.000 -
96. ccdc33 ENSDARG00000051858 11 1 1.000 - - - - - - - - coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1]
97. si:dkey-151g22.1 ENSDARG00000098452 1 1 1.000 - - - - - - - - si:dkey-151g22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-115]
98. CR388163.1 ENSDARG00000096928 5 1 1.000 - - - - - - - -
99. si:dkey-53f14.2 si:dkey-53f14.2 4 1 1.000 - - - - - - - -
100. CR478286.1 CR478286.1 3 1 1.000 - - - - - - - -

There are 791 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA