Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for foxa

Gene Name Gene ID Reads Annotation
foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]










Genes with expression patterns similar to foxa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 5 1.000 - 1.000 1.000 - - 1.000 1.000 - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
2. BX000348.1 BX000348.1 2 2 1.000 - - - - - - 1.000 -
3. antxr1a ENSDARG00000025672 32 1.972 - - 0.972 - - - 1.000 - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
4. DNAI1 DNAI1 11 1.96 0.960 - - - - - 1.000 - -
5. CU457778.1 ENSDARG00000098976 38 1.938 0.938 - - - - - 1.000 - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
6. si:ch73-381a20.2 si:ch73-381a20.2 11 1.936 0.984 - - - - - 0.952 - -
7. LYPLAL1 ENSDARG00000088764 87 1.925 0.978 - - - - - 0.947 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
8. si:ch211-81g2.1 si:ch211-81g2.1 5 1.915 - - - 0.915 - - 1.000 - -
9. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1.915 - - - 0.915 - - 1.000 - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
10. rfc4 ENSDARG00000042458 2 1.915 - - - 0.915 - - 1.000 - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
11. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1.889 - - 0.889 - - - 1.000 - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
12. acy3.1 ENSDARG00000093003 54 1.808 - - 0.818 - - - 0.990 - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
13. MTERFD2 MTERFD2 140 1.805 0.882 - - - - - 0.923 - -
14. FAM132B FAM132B 39 1.76 0.880 - - - - - 0.880 - -
15. si:dkey-97l20.5 si:dkey-97l20.5 33 1.703 - - 0.788 - - - 0.915 - -
16. rps8b ENSDARG00000057368 68 1.673 0.933 - - - - - - 0.740 - ribosomal protein S8b [Source:ZFIN;Acc:ZDB-GENE-050522-202]
17. CDH16 ENSDARG00000077570 78 1.664 - - 0.939 - - - - 0.725 - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
18. PCDH8 ENSDARG00000102185 52 1.563 0.852 - - - - - 0.711 - - protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660]
19. CU693366.1 CU693366.1 186 1.478 0.714 - - - - - 0.764 - -
20. sass6 ENSDARG00000058346 225 1.474 - - - 0.714 - - 0.760 - - SAS-6 centriolar assembly protein [Source:ZFIN;Acc:ZDB-GENE-040426-2784]
21. xrcc5 ENSDARG00000099298 835 1.461 - - - 0.744 - - 0.717 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
22. cacnb4b ENSDARG00000062174 159 1.455 0.735 - - - - - 0.720 - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
23. PLXNB2_1 PLXNB2_1 10 1 - - - - - - 1.000 - -
24. TRMT12 ENSDARG00000060338 58 1 1.000 - - - - - - - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
25. cldn11a ENSDARG00000020031 284 1 - - - - - - 1.000 - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
26. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - - - - - - 1.000 - -
27. CR788231.1 CR788231.1 61 1 - - - - - - 1.000 - -
28. si:dkey-45k15.1 ENSDARG00000061714 32 1 - - - - - - 1.000 - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
29. lcp2a ENSDARG00000055955 23 1 1.000 - - - - - - - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
30. CSF3 CSF3 4 1 - - - - - - 1.000 - -
31. SLC4A8 ENSDARG00000015531 16 1 1.000 - - - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
32. rnf150a_1 ENSDARG00000024827 12 1 - - - - - - 1.000 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
33. FP245525.1 FP245525.1 3 1 1.000 - - - - - - - -
34. CR478286.1 CR478286.1 3 1 1.000 - - - - - - - -
35. ccrl1b ccrl1b 154 1 1.000 - - - - - - - -
36. CR388163.1 ENSDARG00000096928 5 1 1.000 - - - - - - - -
37. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - - - 1.000 - -
38. si:dkey-211g8.7 ENSDARG00000058535 5 1 - - - - - - 1.000 - - si:dkey-211g8.7 [Source:ZFIN;Acc:ZDB-GENE-060503-907]
39. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - - - - - 1.000 - -
40. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - - - - 1.000 - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
41. BX548011.3 ENSDARG00000113526 2 1 - - - - - - 1.000 - -
42. angptl2a ENSDARG00000024030 8 1 - - - - - - 1.000 - - angiopoietin-like 2a [Source:ZFIN;Acc:ZDB-GENE-080721-15]
43. slc25a23b ENSDARG00000024708 51 1 1.000 - - - - - - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b [Source:ZFIN;Acc:ZDB-GENE-040724-220]
44. nid2b ENSDARG00000009471 4 1 - - - - - - 1.000 - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
45. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - - 1.000 - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
46. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - - - - 1.000 - -
47. CU302436.1_1 ENSDARG00000114500 18 1 1.000 - - - - - - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
48. capslb ENSDARG00000003414 77 1 - - - - - - 1.000 - - calcyphosine-like b [Source:ZFIN;Acc:ZDB-GENE-050417-298]
49. mapre3a ENSDARG00000020231 100 1 1.000 - - - - - - - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
50. si:ch211-76l23.4 ENSDARG00000096242 202 1 1.000 - - - - - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
51. BX324198.1 BX324198.1 12 1 1.000 - - - - - - - -
52. CU929225.1 CU929225.1 104 1 - - - - - - 1.000 - -
53. CABZ01112732.1 ENSDARG00000068453 4 1 1.000 - - - - - - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
54. cers3b ENSDARG00000036337 1 1 - - - - - - 1.000 - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
55. SNORD59 SNORD59 7 1 1.000 - - - - - - - -
56. BX649391.1 BX649391.1 2 1 1.000 - - - - - - - -
57. si:dkey-208k22.3 si:dkey-208k22.3 1 1 - - - - - - - 1.000 -
58. nphs1 ENSDARG00000060758 5 1 - - - - - - 1.000 - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
59. serpinb1l2 ENSDARG00000070396 37 1 - - - - - - 1.000 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
60. si:dkey-78a14.5 14 1 - - - - - - 1.000 - - si:dkey-78a14.5, transcript variant X2
61. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 - - - - - - 1.000 - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
62. BX470224.1 ENSDARG00000092793 22 1 - - - - - - 1.000 - -
63. il34 ENSDARG00000091003 14 1 1.000 - - - - - - - - interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
64. MEP1B ENSDARG00000037533, ENSDARG00000115538 10 1 - - - - - - 1.000 - - meprin A, beta [Source:ZFIN;Acc:ZDB-GENE-041014-209]
65. si:ch73-119o17.1 si:ch73-119o17.1 6 1 1.000 - - - - - - - -
66. SNORA14 SNORA14 10 1 - - - - - - - 1.000 -
67. si:dkey-196n19.5 si:dkey-196n19.5 6 1 - - - - - - 1.000 - -
68. FCHSD2_1 FCHSD2_1 14 1 1.000 - - - - - - - -
69. TRPM6 ENSDARG00000103454 15 1 - - - - - - 1.000 - - transient receptor potential cation channel, subfamily M, member 6 [Source:ZFIN;Acc:ZDB-GENE-111212-1]
70. zgc:136930 ENSDARG00000055192 1208 1 1.000 - - - - - - - - zgc:136930 [Source:ZFIN;Acc:ZDB-GENE-060312-16]
71. cyp39a1 ENSDARG00000017982 4 1 - - - - - - 1.000 - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
72. slc4a4b ENSDARG00000044808 9 1 1.000 - - - - - - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
73. cyp2k8 ENSDARG00000101190 69 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
74. CABZ01030262.1 CABZ01030262.1 11 1 - - - - - - - 1.000 -
75. si:dkey-4c15.5 si:dkey-4c15.5 36 1 - - - - - - 1.000 - -
76. si:dkey-145c18.2 ENSDARG00000076694 1 1 - - - - - - - 1.000 - si:dkey-145c18.2 [Source:ZFIN;Acc:ZDB-GENE-081031-55]
77. SNORD52 SNORD52 23 1 1.000 - - - - - - - -
78. TNFRSF14_4 TNFRSF14_4 5 1 - - - - - - 1.000 - -
79. il11b ENSDARG00000058557 17 1 - - - - - - 1.000 - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
80. n6amt2 7 1 - - - - - - 1.000 - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
81. C2CD5 ENSDARG00000094590 1 1 - - - - - - - 1.000 - C2 calcium-dependent domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-041114-193]
82. si:dkey-258p11.3 si:dkey-258p11.3 9 1 - - - - - - 1.000 - -
83. si:ch211-113a14.26 5 1 - - - - - - - 1.000 - si:ch211-113a14.26
84. si:ch211-145b13.6 ENSDARG00000069998 1 1 - - - - - - - 1.000 - si:ch211-145b13.6 [Source:ZFIN;Acc:ZDB-GENE-090313-36]
85. si:dkey-148b12.4 si:dkey-148b12.4 2 1 1.000 - - - - - - - -
86. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 1 1.000 - - - - - - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
87. btr22 ENSDARG00000100539 137 1 - - - - - - 1.000 - - bloodthirsty-related gene family, member 22 [Source:ZFIN;Acc:ZDB-GENE-080402-4]
88. hapln4 ENSDARG00000018542 10 1 - - - 1.000 - - - - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
89. diaph3_1 ENSDARG00000090785 3 1 - - - - - - - 1.000 - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
90. npas2 ENSDARG00000016536, ENSDARG00000116993 35 1 - - - - - - 1.000 - - neuronal PAS domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030408-3]
91. GANC ENSDARG00000074556 36 1 1.000 - - - - - - - - glucosidase, alpha; neutral C [Source:ZFIN;Acc:ZDB-GENE-130530-754]
92. ovca2 ENSDARG00000103748 38 1 - - - - - - 1.000 - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
93. U2_5 U2_5 5 1 1.000 - - - - - - - -
94. CDH18 ENSDARG00000102769 4 1 1.000 - - - - - - - - cadherin 18 [Source:HGNC Symbol;Acc:HGNC:1757]
95. si:dkey-19a16.7 ENSDARG00000071644 460 1 - - - - - - 1.000 - - si:dkey-19a16.7 [Source:ZFIN;Acc:ZDB-GENE-060503-903]
96. Metazoa_SRP_9 Metazoa_SRP_9 26 1 - - - - - - - 1.000 -
97. CABZ01054405.2 CABZ01054405.2 46 1 1.000 - - - - - - - -
98. lrp2bp ENSDARG00000040478 21 1 - - - - - - 1.000 - - LRP2 binding protein [Source:ZFIN;Acc:ZDB-GENE-070615-41]
99. CR388132.1 ENSDARG00000097728 61 1 - - - - - - 1.000 - -
100. grid1b ENSDARG00000044161 20 1 - - - - - - 1.000 - - glutamate receptor, ionotropic, delta 1b [Source:ZFIN;Acc:ZDB-GENE-121214-84]

There are 791 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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