Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for fndc3ba

Gene Name Gene ID Reads Annotation
fndc3ba ENSDARG00000078179 2753 fibronectin type III domain containing 3Ba [Source:ZFIN;Acc:ZDB-GENE-070510-1]










Genes with expression patterns similar to fndc3ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fndc3ba ENSDARG00000078179 2753 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 fibronectin type III domain containing 3Ba [Source:ZFIN;Acc:ZDB-GENE-070510-1]
2. mapk12a ENSDARG00000042021 1573 2.89 - 0.992 0.966 - - - - 0.932 - mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
3. AL929434.1 AL929434.1 3294 2.712 - 0.947 0.888 - - - - 0.877 -
4. COMP 2018 2.548 - 0.968 - - - 0.703 - 0.877 - cartilage oligomeric matrix protein, transcript variant X1
5. pon2 ENSDARG00000016856 1382 1.958 - 0.995 - - - - - 0.963 - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
6. tiprl ENSDARG00000032353 1045 1.957 - 0.990 0.967 - - - - - - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
7. TIFA TIFA 1519 1.949 - 0.984 0.965 - - - - - -
8. CABZ01103862.1 ENSDARG00000109235 3223 1.928 - 0.961 0.967 - - - - - -
9. helz ENSDARG00000030560 3259 1.896 - 0.986 - - - - - 0.910 - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
10. pdap1b ENSDARG00000002967 2159 1.883 - 0.992 0.891 - - - - - - pdgfa associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-942]
11. NID1 NID1 6192 1.867 - 0.952 0.915 - - - - - -
12. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.828 - - 0.964 - - - - 0.864 - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
13. clint1a ENSDARG00000025535 4965 1.818 - 0.906 0.912 - - - - - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
14. epn2 ENSDARG00000008377 5458 1.795 - 0.863 0.932 - - - - - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
15. si:dkey-22o12.7 si:dkey-22o12.7 1812 1.775 - 0.997 - - 0.778 - - - -
16. snoU83B snoU83B 4666 1.772 - 0.979 - - 0.793 - - - -
17. FP236812.4 FP236812.4 1244 1.77 - - 0.960 - 0.810 - - - -
18. ddx42 ENSDARG00000037928 1659 1.765 - - - - 0.851 - - 0.914 - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
19. ttc3 ENSDARG00000086075 2157 1.762 - 0.995 - - 0.767 - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
20. ppp1r14aa ENSDARG00000011239 980 1.755 - - 0.948 - 0.807 - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Aa [Source:ZFIN;Acc:ZDB-GENE-050417-413]
21. ikbkg ENSDARG00000017037 1225 1.752 - - 0.962 - 0.790 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma [Source:ZFIN;Acc:ZDB-GENE-050327-68]
22. FP016176.1 FP016176.1 7030 1.751 - - 0.947 - - - - 0.804 -
23. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.74 - - - - 0.797 - - 0.943 - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
24. C2CD2 ENSDARG00000105000 2573 1.738 - - 0.951 - 0.787 - - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
25. hipk3b ENSDARG00000062082 1248 1.724 - - 0.967 0.757 - - - - - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
26. phgdh ENSDARG00000001873 8325 1.716 - - 0.966 - - - - 0.750 - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
27. necap2 ENSDARG00000046002 4372 1.715 - - - - 0.761 - - 0.954 - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
28. acadvl ENSDARG00000016687 5329 1.709 - 0.984 - - - - - - 0.725 acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
29. kras ENSDARG00000010844 2885 1.702 - - 0.932 - - 0.770 - - - v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040808-67]
30. cnppd1 ENSDARG00000027078 3778 1.684 - - 0.896 - - - - 0.788 - cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]
31. rcn1 ENSDARG00000070006 8455 1.683 - 0.901 - - - 0.782 - - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
32. hint3 ENSDARG00000074286 1015 1.68 - - 0.966 - - 0.714 - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
33. bag6 ENSDARG00000075892 3782 1.677 - 0.973 - - 0.704 - - - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
34. pkp3 pkp3 9767 1.675 - 0.828 - - - - - 0.847 -
35. rps27.2_1 ENSDARG00000055475 2786 1.668 - - - - 0.747 - - 0.921 - ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
36. yipf5 ENSDARG00000007279 2334 1.668 - - 0.962 - - 0.706 - - - Yip1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1057]
37. rhoad rhoad 8007 1.665 - 0.944 - - - - - - 0.721
38. ERBB4_1 ERBB4_1 1064 1.658 - - - - - 0.741 - 0.917 -
39. rtf1 ENSDARG00000008947 6596 1.654 - - - - 0.828 - - 0.826 - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
40. mrps23 ENSDARG00000033973 2265 1.649 - - 0.942 - 0.707 - - - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
41. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 1.647 - - 0.934 - 0.713 - - - - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
42. igfbp5b ENSDARG00000025348 3803 1.643 - - - - - 0.751 - 0.892 - insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
43. PIK3CA_1 PIK3CA_1 4065 1.597 - - - - 0.713 - - 0.884 -
44. rac1 rac1 7341 1.595 - - - - - 0.773 - 0.822 -
45. smg7 ENSDARG00000060767 2759 1.58 - - 0.734 - - - - 0.846 - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
46. ppapdc3 ppapdc3 4924 1.58 - - - - - 0.731 - 0.849 -
47. NDUFC2 ENSDARG00000102115 7848 1.573 - - 0.852 - - 0.721 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:ZFIN;Acc:ZDB-GENE-050320-87]
48. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.545 - - - - 0.727 - - 0.818 - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
49. arid3b ENSDARG00000104034 16303 1.539 - 0.744 0.795 - - - - - - AT rich interactive domain 3B (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-070209-182]
50. tomm5 ENSDARG00000068265 11813 1.536 - - 0.746 - 0.790 - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
51. psma4 ENSDARG00000045928 5112 1.506 - - - - 0.797 0.709 - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
52. cyc1 ENSDARG00000038075 16699 1.45 - - - - - 0.741 - 0.709 - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
53. yme1l1a ENSDARG00000075192 2634 1.43 - - - - 0.727 0.703 - - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
54. gpx4b ENSDARG00000076836 8085 1.421 - - - - 0.718 - 0.703 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
55. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.997 - 0.997 - - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
56. CR293507.1 ENSDARG00000112572 3198 0.997 - 0.997 - - - - - - -
57. exoc1 ENSDARG00000043019 819 0.996 - 0.996 - - - - - - - exocyst complex component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1057]
58. uck2a ENSDARG00000006074 1554 0.996 - 0.996 - - - - - - - uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
59. ahr2 ENSDARG00000021833 762 0.996 - 0.996 - - - - - - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
60. ssr3 ENSDARG00000014165, ENSDARG00000111483 1881 0.996 - 0.996 - - - - - - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
61. CABZ01057907.1 CABZ01057907.1 1140 0.996 - 0.996 - - - - - - -
62. si:ch211-129c21.1 ENSDARG00000024775 371 0.996 - 0.996 - - - - - - - si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
63. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 0.995 - 0.995 - - - - - - - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
64. mxf ENSDARG00000026049 195 0.995 - 0.995 - - - - - - - myxovirus (influenza virus) resistance F [Source:ZFIN;Acc:ZDB-GENE-030721-9]
65. lpar2b ENSDARG00000042561 1086 0.995 - 0.995 - - - - - - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
66. lemd3 ENSDARG00000015824 2868 0.995 - 0.995 - - - - - - - LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
67. amot ENSDARG00000078335 1757 0.995 - 0.995 - - - - - - - angiomotin [Source:ZFIN;Acc:ZDB-GENE-030131-7487]
68. HEATR6 ENSDARG00000073686 241 0.995 - 0.995 - - - - - - - HEAT repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-080204-118]
69. eps15l1a ENSDARG00000042670 1565 0.995 - 0.995 - - - - - - - epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
70. snx16 ENSDARG00000046072 931 0.995 - 0.995 - - - - - - - sorting nexin 16 [Source:ZFIN;Acc:ZDB-GENE-040426-1832]
71. marveld2a ENSDARG00000025076 917 0.995 - 0.995 - - - - - - - MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
72. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 0.995 - 0.995 - - - - - - - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
73. CASK CASK 1750 0.995 - 0.995 - - - - - - -
74. wu:fb12e11 wu:fb12e11 2332 0.995 - 0.995 - - - - - - -
75. gtf2f1 ENSDARG00000032129 3041 0.994 - 0.994 - - - - - - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
76. nrd1 nrd1 324 0.994 - 0.994 - - - - - - -
77. sgce ENSDARG00000012138 912 0.994 - 0.994 - - - - - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
78. SLC6A16_1 SLC6A16_1 1130 0.994 - 0.994 - - - - - - -
79. acmsd ENSDARG00000062549 201 0.994 - 0.994 - - - - - - - aminocarboxymuconate semialdehyde decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-103]
80. supt20 ENSDARG00000078658 713 0.994 - 0.994 - - - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
81. gle1 ENSDARG00000043559 1362 0.994 - 0.994 - - - - - - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
82. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 0.994 - 0.994 - - - - - - - SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
83. prkab1a ENSDARG00000044183 264 0.994 - 0.994 - - - - - - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
84. traf4b ENSDARG00000038964 346 0.994 - 0.994 - - - - - - - tnf receptor-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-040305-2]
85. LDLR LDLR 838 0.994 - 0.994 - - - - - - -
86. mrps26 ENSDARG00000039719, ENSDARG00000117175 1514 0.994 - 0.994 - - - - - - - mitochondrial ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-040718-115]
87. zc3h15 ENSDARG00000015889 3861 0.994 - 0.994 - - - - - - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
88. KIF2A ENSDARG00000043571 1560 0.994 - 0.994 - - - - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
89. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.994 - 0.994 - - - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
90. nucb2b ENSDARG00000036291 911 0.994 - 0.994 - - - - - - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
91. scube2 ENSDARG00000037362 2833 0.994 - 0.994 - - - - - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
92. ncam1b ENSDARG00000007220 233 0.994 - 0.994 - - - - - - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
93. pah ENSDARG00000020143 1551 0.994 - 0.994 - - - - - - - phenylalanine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031006-2]
94. STARD7 ENSDARG00000074858 889 0.994 - 0.994 - - - - - - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
95. zgc:171759_4 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 327 0.994 - 0.994 - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
96. PDPR ENSDARG00000103288 711 0.994 - 0.994 - - - - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
97. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 0.994 - 0.994 - - - - - - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
98. C13H10orf54 C13H10orf54 450 0.994 - 0.994 - - - - - - -
99. si:ch211-133l11.10 ENSDARG00000005626 381 0.994 - 0.994 - - - - - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
100. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 1216 0.994 - 0.994 - - - - - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]

There are 1086 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA