Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for fn1b

Gene Name Gene ID Reads Annotation
fn1b ENSDARG00000006526 9542 fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]










Genes with expression patterns similar to fn1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fn1b ENSDARG00000006526 9542 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
2. tfa ENSDARG00000016771 30517 4.544 0.801 - - 0.725 - 0.839 0.723 0.703 0.753 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
3. apoeb ENSDARG00000040295 229165 3.893 - - - 0.806 - 0.798 0.767 0.787 0.735 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
4. zgc:161979_1 zgc:161979_1 206500 3.718 0.743 - - 0.706 - 0.781 - 0.781 0.707
5. APOB_1 APOB_1 2217 3.319 - 0.885 - - - 0.836 - 0.822 0.776
6. slc43a2b ENSDARG00000061120, ENSDARG00000117188 33657 3.182 0.847 0.703 - - - 0.863 - - 0.769 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
7. zgc:136410 ENSDARG00000102241 8433 3.16 - - - 0.749 - 0.888 0.778 0.745 - zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
8. vtnb ENSDARG00000053831 2364 3.143 - 0.790 - - - 0.859 0.704 - 0.790 vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
9. creb3l3 creb3l3 1981 3.124 0.736 - - - - 0.898 - 0.764 0.726
10. CFI 3801 3.114 - 0.752 - 0.782 - 0.831 - 0.749 - complement factor I
11. dmgdh ENSDARG00000025703 6088 3.111 0.853 0.793 - 0.705 - - - - 0.760 dimethylglycine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-080227-8]
12. vtna ENSDARG00000055388 2635 3.109 - 0.787 - 0.790 - 0.721 - 0.811 - vitronectin a [Source:ZFIN;Acc:ZDB-GENE-050522-440]
13. APOB APOB 33858 3.086 0.807 - - 0.726 - 0.808 - 0.745 -
14. ces2 ENSDARG00000041569, ENSDARG00000110630 5541 3.076 - - - 0.719 - 0.847 0.737 0.773 - carboxylesterase 2 (intestine, liver) [Source:ZFIN;Acc:ZDB-GENE-061013-99]
15. sfxn2 ENSDARG00000017960, ENSDARG00000111267 3869 3.069 0.785 - - 0.724 - 0.804 0.756 - - sideroflexin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2831]
16. TMEM179 ENSDARG00000013292 3452 3.05 0.717 - - 0.797 - 0.702 0.834 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
17. pla2g12b ENSDARG00000015662 27239 3.042 - - - 0.787 - 0.813 - 0.724 0.718 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
18. apom ENSDARG00000076838 4732 3.025 0.740 - - - - 0.799 0.706 0.780 - apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
19. APOA4_1 APOA4_1 3645 3.023 0.724 - - 0.722 - 0.852 - 0.725 -
20. zgc:161979 zgc:161979 196746 3.023 - - - - - 0.722 0.772 0.752 0.777
21. nr0b2a ENSDARG00000044685 2508 3.017 - 0.765 - 0.754 - - - 0.733 0.765 nuclear receptor subfamily 0, group B, member 2a [Source:ZFIN;Acc:ZDB-GENE-080403-1]
22. apoa1b ENSDARG00000101324 336817 2.995 - - - - - 0.765 0.703 0.769 0.758 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
23. ctsh ENSDARG00000041108 2873 2.985 0.738 - - - - 0.812 0.719 0.716 - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
24. mtp_1 3298 2.959 0.720 0.750 - - - 0.754 - 0.735 - microsomal triglyceride transfer protein
25. txn ENSDARG00000044125, ENSDARG00000116040 4758 2.535 0.859 0.771 - - - 0.905 - - - thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]
26. psap ENSDARG00000013968 22919 2.487 - - - 0.703 - 0.938 - - 0.846 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
27. suclg2 ENSDARG00000044914 7950 2.453 0.793 - - - - 0.936 - - 0.724 succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
28. cst3 ENSDARG00000007795 13753 2.451 0.893 - - - - 0.856 0.702 - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
29. bnipl ENSDARG00000060435 1382 2.438 - - 0.819 - - 0.813 0.806 - - BCL2 interacting protein like [Source:ZFIN;Acc:ZDB-GENE-060503-81]
30. glula ENSDARG00000099776 14156 2.426 0.893 - - 0.800 - - - - 0.733 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
31. grhprb ENSDARG00000019986, ENSDARG00000109547 3233 2.424 - - - 0.769 - 0.894 - 0.761 - glyoxylate reductase/hydroxypyruvate reductase b [Source:ZFIN;Acc:ZDB-GENE-040426-1847]
32. g6pca.2 ENSDARG00000013721 2034 2.409 - 0.793 - - - 0.903 - - 0.713 glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
33. ces3 ENSDARG00000041595, ENSDARG00000114555 647 2.406 - - - - - 0.876 0.742 0.788 - carboxylesterase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9563]
34. ctsla ENSDARG00000007836 67814 2.402 - - - - - 0.846 0.734 - 0.822 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
35. apoc1l apoc1l 398664 2.402 0.807 - - - - 0.869 - 0.726 -
36. si:dkey-69o16.5 ENSDARG00000070057 3628 2.398 - - - 0.790 - 0.906 - - 0.702 si:dkey-69o16.5 [Source:ZFIN;Acc:ZDB-GENE-081104-432]
37. pcbd1 ENSDARG00000031981 3373 2.389 0.829 - - - - 0.822 0.738 - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
38. abca1b ENSDARG00000079009 14119 2.373 - - - 0.712 - 0.900 - - 0.761 ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
39. renbp ENSDARG00000008931 1848 2.373 - - - - - 0.851 - 0.754 0.768 renin binding protein [Source:ZFIN;Acc:ZDB-GENE-041212-34]
40. lamp2 ENSDARG00000014914 5035 2.373 0.798 - - 0.719 - 0.856 - - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
41. fetub ENSDARG00000053973 43520 2.353 - - - - - 0.821 - 0.794 0.738 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
42. cyp2aa4 ENSDARG00000098803 1762 2.35 - - - 0.709 - 0.922 - - 0.719 cytochrome P450, family 2, subfamily AA, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-040625-72]
43. cfb ENSDARG00000055278, ENSDARG00000110358 1725 2.345 0.767 - - 0.759 - 0.819 - - - complement factor B [Source:ZFIN;Acc:ZDB-GENE-980526-487]
44. tmsb4x ENSDARG00000077777 670040 2.344 0.767 - - - - 0.828 0.749 - - thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
45. C20H6orf58 C20H6orf58 1105 2.333 0.737 - - - - 0.840 - 0.756 -
46. sardh ENSDARG00000058102, ENSDARG00000112110 2150 2.331 0.757 - - - - 0.864 - 0.710 - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
47. fdps ENSDARG00000040890 4000 2.331 - 0.858 0.734 - - 0.739 - - - farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Source:ZFIN;Acc:ZDB-GENE-050506-78]
48. slc47a1 ENSDARG00000046012 1426 2.331 - 0.727 0.776 - - 0.828 - - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
49. CD68 CD68 4599 2.328 - - - 0.717 - 0.875 - - 0.736
50. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 2.325 0.798 - - - - 0.767 0.760 - - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
51. PCOLCE_1 PCOLCE_1 2148 2.322 0.715 0.857 - - - 0.750 - - -
52. lamb1a ENSDARG00000101209 5396 2.32 - - 0.793 - - 0.737 0.790 - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
53. fgb ENSDARG00000008969 11737 2.318 - - - 0.758 - 0.831 - - 0.729 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
54. SLC12A7 SLC12A7 1702 2.318 - - - 0.745 - 0.804 0.769 - -
55. paics ENSDARG00000033539 30682 2.317 0.813 - - - - - 0.739 - 0.765 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
56. aqp12 ENSDARG00000043279 1881 2.314 0.814 - - 0.742 - - 0.758 - - aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
57. asap2b ENSDARG00000019564 1660 2.311 0.700 - 0.830 - - 0.781 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
58. prdx5 ENSDARG00000055064 27445 2.31 0.714 - - - - 0.834 0.762 - - peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
59. apobb apobb 258472 2.309 0.830 - - - - 0.754 - 0.725 -
60. dao.1 ENSDARG00000035602 11969 2.307 0.810 - - - - - - 0.702 0.795 D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
61. rnasel3 ENSDARG00000036171, ENSDARG00000116275 3928 2.298 - - - 0.800 - 0.797 - 0.701 - ribonuclease like 3 [Source:ZFIN;Acc:ZDB-GENE-050809-5]
62. serpina1 ENSDARG00000090286 8108 2.296 0.761 - - - - 0.827 - - 0.708 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]
63. CABZ01045212.1 ENSDARG00000087525 1460 2.283 0.776 - - - - 0.765 0.742 - - major facilitator superfamily domain-containing protein 8-like [Source:NCBI gene;Acc:564731]
64. fabp1b.1 ENSDARG00000059227 5670 2.282 0.751 - - 0.714 - 0.817 - - - fatty acid binding protein 1b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-96]
65. apoa4 apoa4 84813 2.27 - - - - - 0.751 - 0.763 0.756
66. hao1 ENSDARG00000024160 6104 2.247 - 0.739 - 0.765 - - - - 0.743 hydroxyacid oxidase (glycolate oxidase) 1 [Source:ZFIN;Acc:ZDB-GENE-060519-2]
67. rgrb ENSDARG00000098724 1546 2.237 - 0.749 - 0.714 - 0.774 - - - retinal G protein coupled receptor b [Source:ZFIN;Acc:ZDB-GENE-050522-447]
68. rgn ENSDARG00000098645, ENSDARG00000114128 936 2.236 0.765 - - - - 0.768 0.703 - - regucalcin [Source:ZFIN;Acc:ZDB-GENE-040718-68]
69. CLEC4A CLEC4A 1016 2.234 - - - 0.720 - 0.807 0.707 - -
70. MPC2 ENSDARG00000024478 4194 2.226 - - - 0.741 - 0.774 - - 0.711 mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
71. VMO1_1 VMO1_1 828 2.22 - 0.752 - - - 0.718 - 0.750 -
72. rgs4 ENSDARG00000070047, ENSDARG00000116319 2461 2.215 - 0.724 - - - 0.788 - - 0.703 regulator of G protein signaling 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9839]
73. rhbg ENSDARG00000009018 1131 2.207 0.758 - - - - 0.734 - 0.715 - Rh family, B glycoprotein (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-030131-9542]
74. f2 ENSDARG00000036041 3129 2.178 - 0.732 - - - 0.739 - 0.707 - coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
75. zgc:153129 zgc:153129 97132 2.168 0.740 - - 0.727 - - 0.701 - -
76. znrf2a ENSDARG00000077855 1845 2.163 0.711 - - 0.749 - 0.703 - - - zinc and ring finger 2a [Source:ZFIN;Acc:ZDB-GENE-070820-15]
77. plg ENSDARG00000023111 2429 2.149 - - - - - 0.721 - 0.727 0.701 plasminogen [Source:ZFIN;Acc:ZDB-GENE-030131-1411]
78. miox ENSDARG00000002764 588 2.142 - - - 0.730 - 0.702 - - 0.710 myo-inositol oxygenase [Source:ZFIN;Acc:ZDB-GENE-050913-113]
79. capn9 ENSDARG00000012341 12911 1.774 0.869 - - - - - 0.905 - - calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]
80. BX511245.1 ENSDARG00000096871 7523 1.761 0.878 - 0.883 - - - - - -
81. itgb1b.1 ENSDARG00000053232 4721 1.749 - - - - - 0.906 0.843 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
82. fn1 fn1 2538 1.731 - - 0.823 - - 0.908 - - -
83. CABZ01007794.1 CABZ01007794.1 14290 1.72 0.804 - - - - - 0.916 - -
84. cldne ENSDARG00000043128 6960 1.698 0.844 - - - - - 0.854 - - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
85. LIMD2 ENSDARG00000078092 3414 1.689 - - - - - 0.799 0.890 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
86. rpe ENSDARG00000005251, ENSDARG00000117024 3865 1.674 0.838 - - - - 0.836 - - - ribulose-5-phosphate-3-epimerase [Source:ZFIN;Acc:ZDB-GENE-030131-6837]
87. tinagl1 ENSDARG00000061231 2677 1.667 - - - - - 0.916 0.751 - - tubulointerstitial nephritis antigen-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-240]
88. bambib ENSDARG00000099677 4267 1.661 - - - - - 0.806 0.855 - - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
89. epdl2 ENSDARG00000055539 1895 1.659 - 0.754 - - - 0.905 - - - ependymin-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-250]
90. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.659 - 0.826 - - - 0.833 - - - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
91. BX957362.1 ENSDARG00000105682 1941 1.654 0.804 - - - - 0.850 - - - uncharacterized LOC103911422 [Source:NCBI gene;Acc:103911422]
92. gata6 ENSDARG00000103589 746 1.651 - 0.826 - - - 0.825 - - - GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-000622-1]
93. NCOA7_1 NCOA7_1 3222 1.65 0.872 - - - - - - - 0.778
94. daam1a ENSDARG00000015059 1460 1.649 - 0.863 - - - 0.786 - - - dishevelled associated activator of morphogenesis 1a [Source:ZFIN;Acc:ZDB-GENE-030911-6]
95. WDR1 ENSDARG00000114022 7532 1.645 - - 0.801 - - 0.844 - - - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
96. yipf6 ENSDARG00000054433, ENSDARG00000116553 3052 1.64 - 0.866 - - - - 0.774 - - Yip1 domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-040625-76]
97. arhgap27 ENSDARG00000104255 439 1.64 - - 0.850 - - - 0.790 - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
98. sat1a.1 ENSDARG00000035652 2941 1.64 - - - - - 0.854 - 0.786 - spermidine/spermine N1-acetyltransferase 1a, duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-41]
99. slc26a5 ENSDARG00000022424 976 1.638 - 0.776 - - - 0.862 - - - solute carrier family 26 (anion exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1566]
100. sid4 sid4 1358 1.636 - 0.755 - - - 0.881 - - -

There are 1277 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA