Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for fmnl3

Gene Name Gene ID Reads Annotation
fmnl3 ENSDARG00000004372 821 formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]










Genes with expression patterns similar to fmnl3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fmnl3 ENSDARG00000004372 821 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
2. ttc3 ENSDARG00000086075 2157 2.56 - - - - 0.950 - 0.800 0.810 - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
3. nudt2 ENSDARG00000058728 371 2.503 - - - - 0.956 - 0.717 0.830 - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
4. wdr3 ENSDARG00000011079 1403 2.453 - 0.793 - - 0.886 - 0.774 - - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
5. apaf1 ENSDARG00000021239 1185 2.418 - - - 0.763 0.914 - - 0.741 - apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
6. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.197 0.704 0.789 - - - 0.704 - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
7. zgc:110655 zgc:110655 4237 2.171 - 0.718 - - 0.731 0.722 - - -
8. C8H5orf51 C8H5orf51 1199 1.743 - - - - 0.943 - - 0.800 -
9. ZNF337_25 ZNF337_25 1713 1.729 - - - - 0.911 - - 0.818 -
10. slc25a39 ENSDARG00000007449 630 1.72 - 0.888 - 0.832 - - - - - solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
11. cpt1a cpt1a 674 1.719 - - - - 0.980 - 0.739 - -
12. wdr59 ENSDARG00000088817 1005 1.713 - - - - 0.917 - - 0.796 - WD repeat domain 59 [Source:ZFIN;Acc:ZDB-GENE-120215-187]
13. mtmr2 ENSDARG00000004616 1052 1.712 - - - 0.773 0.939 - - - - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
14. znf511 ENSDARG00000000760 446 1.711 - - - - 0.951 - 0.760 - - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
15. PRC1 PRC1 583 1.702 - 0.731 - - 0.971 - - - -
16. zgc:175214 ENSDARG00000022891 1013 1.689 - 0.795 - - - - - 0.894 - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
17. lpl ENSDARG00000087697 2578 1.677 - - - - 0.827 0.850 - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
18. KBTBD2 ENSDARG00000087226 707 1.672 - - - 0.748 0.924 - - - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
19. APBA3 APBA3 852 1.661 - 0.801 - - - - - 0.860 -
20. paf1 ENSDARG00000098432 1806 1.659 0.719 - - - 0.940 - - - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
21. BX323459.1 ENSDARG00000109508 1476 1.654 - - - - 0.941 - - 0.713 -
22. mef2d ENSDARG00000040237 6144 1.65 - 0.776 - - - - - 0.874 - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
23. ccnf ENSDARG00000105046 1790 1.649 - - - - 0.753 - - 0.896 - cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]
24. leo1 ENSDARG00000055357 1644 1.641 - 0.760 - - 0.881 - - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
25. hcls1 ENSDARG00000012729 1547 1.638 - - - 0.724 0.914 - - - - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
26. rbm39b ENSDARG00000041853 1421 1.636 - - - - 0.896 - 0.740 - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
27. zgc:136474 zgc:136474 658 1.63 - - - - - - 0.771 0.859 -
28. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.621 - 0.723 - - 0.898 - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
29. ITGB1BP2 ENSDARG00000030176 2472 1.621 - 0.802 - - - 0.819 - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
30. yme1l1a ENSDARG00000075192 2634 1.615 - 0.706 - - 0.909 - - - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
31. pnp5b ENSDARG00000099802 551 1.61 - - - - - - 0.729 0.881 - purine nucleoside phosphorylase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-54]
32. lcp1 ENSDARG00000023188 298 1.597 - - - - - - 0.833 0.764 - lymphocyte cytosolic protein 1 (L-plastin) [Source:ZFIN;Acc:ZDB-GENE-991213-5]
33. hbegfa ENSDARG00000075121 1865 1.596 - - - 0.745 0.851 - - - - heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
34. chrna1 ENSDARG00000009021 2931 1.595 - 0.770 - - - 0.825 - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
35. prkacaa ENSDARG00000100349 2711 1.593 - 0.709 - - 0.884 - - - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
36. utp18 ENSDARG00000102618 1983 1.588 0.772 - - - 0.816 - - - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
37. fam98a ENSDARG00000078391, ENSDARG00000109752, ENSDARG00000110498 997 1.58 - - - - - 0.758 - 0.822 - family with sequence similarity 98, member A [Source:ZFIN;Acc:ZDB-GENE-091202-6]
38. ZNF518B 475 1.578 0.731 - - - - - - 0.847 - zinc finger protein 518B
39. opa1_1 ENSDARG00000070801 1424 1.57 - - - - - 0.751 - 0.819 - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
40. klhl41a ENSDARG00000068888 1034 1.568 - 0.720 - - - - - 0.848 - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
41. ssbp1 ENSDARG00000039350 809 1.563 0.757 0.806 - - - - - - - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
42. vbp1 ENSDARG00000030241 10619 1.558 - 0.788 - - - 0.770 - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
43. sox10 ENSDARG00000077467 1936 1.546 - - - - 0.785 0.761 - - - SRY (sex determining region Y)-box 10 [Source:ZFIN;Acc:ZDB-GENE-011207-1]
44. atg4a ENSDARG00000014531 481 1.532 - - - 0.752 - - 0.780 - - autophagy related 4A, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-430]
45. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 1.532 - - - 0.720 - - 0.812 - - ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
46. smyd2b ENSDARG00000005629 8181 1.531 - 0.740 - - - 0.791 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
47. si:dkey-177p2.6 ENSDARG00000042322 2783 1.528 - - - - - 0.715 0.813 - - si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
48. cd248b ENSDARG00000077938 2561 1.515 - 0.746 - - - 0.769 - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
49. CR524823.3 CR524823.3 124 1.512 - 0.770 - 0.742 - - - - -
50. rbfa ENSDARG00000073705 601 1.508 - 0.703 - - - - 0.805 - - ribosome binding factor A [Source:ZFIN;Acc:ZDB-GENE-070410-83]
51. rtkn2 rtkn2 1092 1.508 - - - 0.706 - - - 0.802 -
52. mir133b_1 671 1.505 - 0.703 - - - - - 0.802 - microRNA 133b
53. C1H4orf27 C1H4orf27 1961 1.505 - 0.702 - - 0.803 - - - -
54. fads2 ENSDARG00000019532 152 1.499 - 0.718 - - - - - 0.781 - fatty acid desaturase 2 [Source:ZFIN;Acc:ZDB-GENE-011212-1]
55. fundc2 ENSDARG00000103740 3856 1.494 - - - - - 0.713 - 0.781 - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
56. alg3 ENSDARG00000053155 1843 1.491 - 0.767 - - - 0.724 - - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
57. ubr5 ENSDARG00000018192 9267 1.486 0.779 0.707 - - - - - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
58. CABZ01005777.1 CABZ01005777.1 505 1.485 - - - 0.772 - - 0.713 - -
59. mphosph10 ENSDARG00000012495 1679 1.474 - 0.758 - - - 0.716 - - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
60. eif2b3 ENSDARG00000018106 381 1.473 0.723 0.750 - - - - - - - eukaryotic translation initiation factor 2B, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1039]
61. EPC1 EPC1 500 1.467 0.707 0.760 - - - - - - -
62. tspan4 tspan4 692 1.465 0.705 - - - - - - 0.760 -
63. ntmt1 ENSDARG00000022399 5779 1.461 - 0.734 - - - 0.727 - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
64. col4a1 ENSDARG00000055009 3083 1.457 0.712 - - - - 0.745 - - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
65. usp19 ENSDARG00000004132 811 1.452 0.722 - - - - - 0.730 - - ubiquitin specific peptidase 19 [Source:ZFIN;Acc:ZDB-GENE-030131-3055]
66. cspg4 ENSDARG00000078227 1084 1.45 - 0.739 - - - - - 0.711 - chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
67. EEF1E1 ENSDARG00000071774 3806 1.444 0.719 0.725 - - - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
68. ATP5J_2 ATP5J_2 2381 1.433 - 0.732 - - - 0.701 - - -
69. rdh14b ENSDARG00000002467 991 1.431 - 0.715 0.716 - - - - - - retinol dehydrogenase 14b [Source:ZFIN;Acc:ZDB-GENE-030131-6605]
70. tgm1l1 ENSDARG00000102106 1437 1.429 - 0.708 - - - 0.721 - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
71. znf648 ENSDARG00000104823 1918 1.421 - 0.718 - - - 0.703 - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
72. sh3bgr ENSDARG00000021633 3498 1.412 - 0.706 - - - - - 0.706 - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
73. nhsa ENSDARG00000070227 686 1.411 0.701 0.710 - - - - - - - Nance-Horan syndrome a (congenital cataracts and dental anomalies) [Source:ZFIN;Acc:ZDB-GENE-090617-1]
74. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.409 0.703 - - - - 0.706 - - -
75. si:ch211-181p13.2 ENSDARG00000096484 94 0.984 - - - - 0.984 - - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
76. tpi1a ENSDARG00000025012 562 0.984 - - - - 0.984 - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
77. rwdd2b ENSDARG00000055426 294 0.984 - - - - 0.984 - - - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
78. pigt ENSDARG00000075842 210 0.983 - - - - 0.983 - - - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
79. LRRC30 LRRC30 83 0.982 - - - - 0.982 - - - -
80. CR626962.1 ENSDARG00000096981 220 0.982 - - - - 0.982 - - - -
81. stub1 ENSDARG00000045228 105 0.982 - - - - 0.982 - - - - STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
82. si:dkey-37o8.1 ENSDARG00000071727 64 0.982 - - - - 0.982 - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
83. si:dkeyp-106c3.1 ENSDARG00000090623 225 0.982 - - - - 0.982 - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
84. GRIN2B GRIN2B 140 0.981 - - - - 0.981 - - - -
85. KEL ENSDARG00000076950 159 0.981 - - - - 0.981 - - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
86. si:dkey-20l4.2 si:dkey-20l4.2 110 0.981 - - - - 0.981 - - - -
87. MTBP ENSDARG00000090447 174 0.981 - - - - 0.981 - - - - MDM2 binding protein [Source:ZFIN;Acc:ZDB-GENE-120724-1]
88. zbtb20 ENSDARG00000005586 195 0.981 - - - - 0.981 - - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
89. rereb ENSDARG00000075670 136 0.981 - - - - 0.981 - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
90. tmem230a ENSDARG00000027687, ENSDARG00000109832 333 0.98 - - - - 0.980 - - - - transmembrane protein 230a [Source:ZFIN;Acc:ZDB-GENE-040822-20]
91. mis18a ENSDARG00000035333 555 0.98 - - - - 0.980 - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
92. pex12 ENSDARG00000035149 175 0.98 - - - - 0.980 - - - - peroxisomal biogenesis factor 12 [Source:ZFIN;Acc:ZDB-GENE-040426-929]
93. manf ENSDARG00000063177, ENSDARG00000114083 570 0.98 - - - - 0.980 - - - - mesencephalic astrocyte-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-060929-640]
94. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 0.979 - - - - 0.979 - - - - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
95. cep72 ENSDARG00000105258 344 0.979 - - - - 0.979 - - - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
96. sugp1 ENSDARG00000075936 826 0.978 - - - - 0.978 - - - - SURP and G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-33]
97. etv1 ENSDARG00000101959 358 0.978 - - - - 0.978 - - - - ets variant 1 [Source:ZFIN;Acc:ZDB-GENE-070104-1]
98. DNAJC16_1 DNAJC16_1 245 0.978 - - - - 0.978 - - - -
99. TTF1_5 TTF1_5 705 0.977 - - - - 0.977 - - - -
100. BX571949.1 BX571949.1 293 0.977 - - - - 0.977 - - - -

There are 1451 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA